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Domain assignment for Solyc04g076850.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc04g076850.2.1
Domain Number 1 Region: 227-330
Classification Level Classification E-value
Superfamily CAD & PB1 domains 2.4e-21
Family PB1 domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc04g076850.2.1
Sequence length 349
Comment genomic_reference:SL2.40ch04 gene_region:59354651-59358834 transcript_region:SL2.40ch04:59354651..59358834+ go_terms:GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 *-*- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MSPPLLGVGEEEGQSNVTLLASSTSLGSICIKGSALKERNYMGLSDCSSVDSCNISTSSE
DNNGCGLNLKATELRLGLPGSQSPERGEETCPVSSTKVDEKLLFPLHPSKDTAFSVSQKT
VVSGNKRGFSDAMDGFSEGKFLSNSGVKAGDTKETSRVQPPKMKDANTQSTVPERPSAVN
DASNRAGSGAPATKAQVVGWPPIRSFRKNTLASASKNNEEVDGKAGSPALFIKVSMDGAP
YLRKVDLRTCSAYQELSSALEKMFSCFTIGQYGSHGAPGKDMLSESKLKDLLHGSEYVLT
YEDKDGDWMLVGDVPWEMFIDTCKRLRIMKGSDAIGLAPRAMEKCRSRN
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Identical sequences K4BUC3
Sopim04g076850.0.1 Solyc04g076850.2.1 Solyc04g076850.2.1 NP_001265888.2.44838

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