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Domain assignment for Solyc06g053830.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc06g053830.2.1
Domain Number 1 Region: 96-199
Classification Level Classification E-value
Superfamily CAD & PB1 domains 2.45e-21
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc06g053830.2.1
Sequence length 218
Comment genomic_reference:SL2.40ch06 gene_region:33179702-33182081 transcript_region:SL2.40ch06:33179702..33182081- go_terms:GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MDLKTELCLGLPGGGGDHNIKKRGFSQTVDLKLNLHHNDNIPSMNINNPPKDNSSNKPPT
KAQVVGWPPVRSFRKNMLSQKGNNNNNNNEEISEKDEKTIAFVKVSMDGAPYLRKVDLKM
YKSYQQLSHSLTNMFSSFTMGNYGSQGMIDFMNERKLMDVLNSSDYVPTYEDKDGDWMLV
GDVPWQMFVDSCKRLRIMKGSEAIGLAPRAMEKCKNRS
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Identical sequences G9HPV6
Solyc06g053830.2.1 Sopim06g053830.0.1 NP_001266039.1.44838 Solyc06g053830.2.1

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