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Domain assignment for Solyc06g071750.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc06g071750.2.1
Domain Number 1 Region: 23-109
Classification Level Classification E-value
Superfamily CAD & PB1 domains 9.16e-23
Family PB1 domain 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc06g071750.2.1
Sequence length 193
Comment genomic_reference:SL2.40ch06 gene_region:40585640-40586725 transcript_region:SL2.40ch06:40585640..40586725+ functional_description:"Octicosapeptide/Phox/Bem1p domain-containing protein (AHRD V1 **-- D7LRK8_ARALY); contains Interpro domain(s) IPR000270 Octicosapeptide/Phox/Bem1p "
Sequence
MSQSTQIVKFLYSYGGRILPRPSDGTLRYIGGFTRVLSVDRSISFAELMVKFGELYGSSM
RLKCKMPTEDLDVLVSITCDEDLANVIEEYDRVSAMTNTEMKIRALLSPINLPKKDSRPS
SPMSCFDFAASSLKPGKFVQFNSPPSYAAARRLFSPVVGYPTGRRTDGEELYYPYCGQAG
VKPLYNVVPIHCQ
Download sequence
Identical sequences K4C8P7
Solyc06g071750.2.1 Solyc06g071750.2.1 XP_004241543.1.44838

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