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Domain assignment for Solyc07g063650.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc07g063650.2.1
Domain Number 1 Region: 304-476,518-649,701-799
Classification Level Classification E-value
Superfamily Cysteine proteinases 3.53e-76
Family Ubiquitin carboxyl-terminal hydrolase, UCH 0.0028
Further Details:      
 
Domain Number 2 Region: 158-266
Classification Level Classification E-value
Superfamily RING/U-box 3.18e-32
Family Zf-UBP 0.00000678
Further Details:      
 
Domain Number 3 Region: 668-717
Classification Level Classification E-value
Superfamily UBA-like 0.00000000000172
Family UBA domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc07g063650.2.1
Sequence length 801
Comment genomic_reference:SL2.40ch07 gene_region:63283470-63293518 transcript_region:SL2.40ch07:63283470..63293518- go_terms:GO:0004843 functional_description:"Ubiquitin carboxyl-terminal hydrolase (AHRD V1 **** B9N564_POPTR); contains Interpro domain(s) IPR016652 Ubiquitinyl hydrolase "
Sequence
MELLRSNLARVRIPEPTTRIYKHECCISFDTPKSDGGLFVDMSTFLAFGRDCVDWNYEKT
GNPVYLHIKQTKKADAEDRPSKKPTLLAIGLDGGFDNSEPQYEEFYEIVILPDNVTLPFP
SVELPEKVRLAVDAILLAEGAERKEQLASWTADKKLVSKYATDLQQLDNGVAVPPVGWKC
AKCDKTDNLWLNLTDGTILCGRKNWDGTGGNDHAVNHYKETGYPLAVKLGTVTADLEGAD
VYSYPEDESVVDPLLADHLAHFGIDFSSLQKTEMTTAERELDQNFNFDWNRIQETGEDVE
PLFGPGYTGLVNLGNSCYLAATMQVMFSTRSFCSRYYFDQRLKEAFTTAPADPTVDLNMQ
LTKLAHGLLSGKYSGPVLEKDNTANAVSSQKQEGIRPRMFKSVIAASHPEFSTMRQQDAL
EFFLHFIDQVERINSGTPNFDPSRSFKFGIEERLQCSSGKVTYNRRNDYILSLNIPLERA
INKKELAEFQNLKAERAAGGKELSADEIVRPRVSLKDCLDCFSAPEEVHDFYSTALTART
TAIKTAGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYIDVPETIDISSMRSNGIQPGEELL
PDSAAGDGEQSIKLLADDDIVAQLVSMGFNLLHCQKAAINTSNSGVEAAMDWLLNHMNDP
DIDAPISENVQNPDIDQSKVDTLVSFGFEEKLAHKALKASGGDVEKATEWIFSSPSASTA
ADMDVTTSSGAAVDTLMPDGGGKYRLLGFVSHIGTSTHCGHYVAHINKDGRWVIFNDEKV
GVSKNPPMDMGYLYFFERLES
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Identical sequences K4CH48
Solyc07g063650.2.1 Solyc07g063650.2.1 XP_004244180.1.44838 Sopim07g063650.0.1

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