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Domain assignment for Solyc08g021820.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g021820.2.1
Domain Number 1 Region: 139-224
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000000235
Family PB1 domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc08g021820.2.1
Sequence length 227
Comment genomic_reference:SL2.40ch08 gene_region:9926828-9928295 transcript_region:SL2.40ch08:9926828..9928295- go_terms:GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MELELGLAISNCNHFPINAITSYRKNGFDDSFSDMKMKMKQKRCFEEAFHEDEGVVERKT
LSLFIWNGQPNEDDDNHGRNKKPFNATCHKDFEEESLKLLGWPPINTWRKKQFHHQGHAG
WITNDRNNNNNNNNNVIVGGRNSMYVKVKMEGVPIGRKVDLRLYHSYQLFTQNLLQMFAR
YQNSGKNSTRFTILYQDREGDWMLAGDVPWKTFVETVQRIEIQKNEK
Download sequence
Identical sequences G9HPX2
NP_001266091.1.44838 Solyc08g021820.2.1 Solyc08g021820.2.1

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