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Domain assignment for Solyc09g065850.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc09g065850.2.1
Domain Number 1 Region: 84-173
Classification Level Classification E-value
Superfamily CAD & PB1 domains 1.57e-22
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc09g065850.2.1
Sequence length 185
Comment genomic_reference:SL2.40ch09 gene_region:59713336-59714551 transcript_region:SL2.40ch09:59713336..59714551- go_terms:GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MRIYEKDINDLEATELRLGLPGIINDESSTSTSTSKNSRKRPSSSSVNENEQQDSAPAPK
AQVVGWPPVRSYRKNHVSKLSESDNNSSGMYLKVSMDGAPYLRKIDLQVYKSYQELLKAL
QSMFKCTIGVYSEREGYNGSDYAPTYEDKDGDWMLVGDVPWEMFISSCKRLRIIKGSEAK
GLACL
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Identical sequences G9HPV4
Sopim09g065850.0.1 Solyc09g065850.2.1 Solyc09g065850.2.1 NP_001266029.1.44838

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