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Domain assignment for Solyc11g005120.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc11g005120.1.1
Domain Number 1 Region: 2-89
Classification Level Classification E-value
Superfamily SRF-like 8.11e-31
Family SRF-like 0.00023
Further Details:      
 
Weak hits

Sequence:  Solyc11g005120.1.1
Domain Number - Region: 111-190
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0607
Family BAR domain 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc11g005120.1.1
Sequence length 238
Comment evidence_code:10F0H1E1IEG genomic_reference:SL2.40ch11 gene_region:107329-109329 transcript_region:SL2.40ch11:107329..109329- go_terms:GO:0005515,GO:0003700 functional_description:"MADS-box transcription factor 29 (AHRD V1 **** B6TVD9_MAIZE); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box "
Sequence
MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSTKGKLFEYTTQ
PHSMGEIINKYLQTTGASLPIHDHRVEQYDEITKMKRETLNLELSLQRYKGDELNSAQYD
ELNELEKQLENSINKIRARKLELLQQQMENLKRTEKMLEKENHDMCQWLMKYEMYKQQPV
AMMEQQEEAAITELNLLGEQPLLSQFSFFGDQHQLGTTSNSSAYHLQTSHPFTPSTYD
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Identical sequences K4D4C5
Sopim11g005120.0.1 XP_019066630.1.44838 Solyc11g005120.1.1 Solyc11g005120.1.1

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