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Domain assignment for Solyc08g076420.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g076420.2.1
Domain Number 1 Region: 277-448
Classification Level Classification E-value
Superfamily ADP-ribosylation 2.88e-22
Family Poly(ADP-ribose) polymerase, C-terminal domain 0.013
Further Details:      
 
Domain Number 2 Region: 95-152
Classification Level Classification E-value
Superfamily WWE domain 0.0000497
Family WWE domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc08g076420.2.1
Sequence length 597
Comment genomic_reference:SL2.40ch08 gene_region:57594964-57603672 transcript_region:SL2.40ch08:57594964..57603672- go_terms:GO:0003950 functional_description:"Poly polymerase catalytic domain containing protein expressed (AHRD V1 **-- Q84T80_ORYSJ); contains Interpro domain(s) IPR012317 Poly(ADP-ribose) polymerase, catalytic region "
Sequence
MESNWVEVLDNDRRTADVDSKSKVASQYVARIVGAGTEKLEELSFQPNCSSFYSTLGKRK
RTVEGETNCRSHLRKSTVKNYSNFIKSGLPQRVLYHQNGEWNDFPQDIVRIVKEDFRAKK
AVIEVNFGGFHVILDILYMVQVNLVTGLEKPIAWIDEAGGCFFPDLCLVSCKAHDNIEIQ
SQRTEGFSAAEPDRATNIKLHLEIDINGPNNCKLDEGMEESNVRVKRIKVDPLKDNQQFA
VDQKSYPKMEVVAENQQDQESLSPILEDTLKLVDAESVKTMFVKGMNTIYMVDIVKISQC
SSKYMRNRLELFEKQAEITQKYRGKSNVRHAWLAASKEVVSTIMNYGLMHGACGQKTKLG
VGVHLIAQDCASKSAASCDIDENGIRYMVLCRVILGNEELLHFGSHQSYPSNERYDSGVD
DLESPTHYTVWNMNMNTHIYPEYVVSFRMSSGAEGAPIKEESRLDVSRVTSQGSEERLDL
NKLPTELGNCQQYQFVRNIQQSHGVGVGTNKSPKSPWMPFSMLFGAISAKVSPKDLKLVH
AHYDLFRSKKISRNDFIRRLRLIVGDQLLKSTITNLQCKPPSASPCFLNVPSGESNC
Download sequence
Identical sequences K4CN05
Solyc08g076420.2.1 Sopim08g076420.0.1 XP_004245934.1.44838 Solyc08g076420.2.1

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