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Domain assignment for Solyc00g011660.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc00g011660.1.1
Domain Number 1 Region: 208-298
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 8.24e-16
Family B3 DNA binding domain 0.0046
Further Details:      
 
Domain Number 2 Region: 13-97
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000000922
Family B3 DNA binding domain 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc00g011660.1.1
Sequence length 310
Comment evidence_code:10F0H0E1IEG genomic_reference:SL2.40ch00 gene_region:10257994-10259284 transcript_region:SL2.40ch00:10257994..10259284+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein At1g49475 (AHRD V1 *-*- Y1475_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MANEFHGSSLRSSSPNNPKFIQIITSLDELRRLMLNPVFLEAPHGKAWEVEVENSQGQIW
LAKGWSDFCDYYSISIKSVLMFTYNPRCQFSVAIYDQSKTEIEYPIDQDIESDEQEEDIL
FAQANANIIEEDILILQSNANVIEEDIPILQSNTNEIEDEEEHIPVNCPQTNANLIEQHK
EVREANSISEKVGPNNYSSRYSLVDLTGDNPFFEMVIKKSHATCMAIPLRFAQQTDIINM
KNMRLVNEEGVEWKVEIEYARSMVIIKEGWTAFRKDNKIANGETCRFKLIRGPIANVLQV
QKIPTPLCLQ
Download sequence
Identical sequences Sopim00g011660.0.1 Solyc00g011660.1.1 Solyc00g011660.1.1

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