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Domain assignment for Solyc01g088820.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  Solyc01g088820.2.1
Domain Number - Region: 30-93
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0483
Family Homeodomain 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc01g088820.2.1
Sequence length 329
Comment genomic_reference:SL2.40ch01 gene_region:75309408-75310668 transcript_region:SL2.40ch01:75309408..75310668+ functional_description:"Transcription factor (AHRD V1 **-- D7LLP9_ARALY); contains Interpro domain(s) IPR006578 MADF domain "
Sequence
MATFSPSTRDFSTNPSQILSSSNVTVAVPSRRLPPPCWSHDETIALIDAYRDKWYSLRKG
NLRANHWQEVADDVGSRCPVDPPKTAVQCRHKMEKLRKRYRAEIQRAAPYGGPRSHRYCS
AWVHFKRMDMMERGPNAVSPPPSEDEADEDVEDYHQNGVKLVGDLYGNNVHAGNRSSFQG
VVSNGGGGFRIRIPGMPGLAPPMAKPYSRFEEARVETPSNFGSSQMFRDGFVKKADLGKR
VVGEGVREKKKEDPMVEMVAAIKVLGDGFVRMERMKMDAARELERMRMEMEMKRTEMILE
SQQRVVEAFAQALSEKKYKKAKRMPTPEC
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Identical sequences K4AYS2
Sopim01g088820.0.1 XP_004229727.1.44838 Solyc01g088820.2.1 Solyc01g088820.2.1

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