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Domain assignment for Solyc03g083110.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g083110.1.1
Domain Number 1 Region: 169-256
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.59e-28
Family B3 DNA binding domain 0.00014
Further Details:      
 
Domain Number 2 Region: 47-98
Classification Level Classification E-value
Superfamily DNA-binding domain 0.000000000000445
Family GCC-box binding domain 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc03g083110.1.1
Sequence length 335
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch03 gene_region:46473739-46475572 transcript_region:SL2.40ch03:46473739..46475572+ go_terms:GO:0003677,GO:0016564 functional_description:"AP2 domain-containing transcription factor (AHRD V1 **** B9IMF3_POPTR); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MEDETNLISSTTNVTVGDCDSSGSNHLLPKKRNINNAREGKCCISGSKFKGVVGQNNGHW
GAQIYANHQRIWLGTFKTETDAAMAYDSAAIRLLGPDHSHRNLSWTNSTIQEPNFQTQFS
TEDILRMIKEGSYTSRFDEYLKDKFEDHFQSLKNLQKVNEGNAEFSYKQLFQKELTPSDV
GKLNRLVIPKKYATKYFPQIQDEEMIFYDTSRRLWKFRYCYWKSSQSFVFTKGWNKFVKD
KGLRAKDTIVFNLCEFKNGTKENCNAFVIDVVKSIDGVPMNLALNHHEQEETIDDHEVDT
QEFTKAQPFDDDLVPVWLFGKQIGWMETKGAMEFN
Download sequence
Identical sequences K4BI87
XP_010318116.1.44838 Solyc03g083110.1.1 Solyc03g083110.1.1

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