SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for Solyc04g079130.2.1 from Solanum lycopersicum v.2.3

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  Solyc04g079130.2.1
Domain Number 1 Region: 119-217
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.26e-24
Family B3 DNA binding domain 0.0035
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc04g079130.2.1
Sequence length 267
Comment genomic_reference:SL2.40ch04 gene_region:61309179-61311733 transcript_region:SL2.40ch04:61309179..61311733- go_terms:GO:0006355 functional_description:"B3 domain-containing protein At5g42700 (AHRD V1 ***- Y5270_ARATH); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Download sequence
Identical sequences K4BUZ7
Sopim04g079130.0.1 Solyc04g079130.2.1 Solyc04g079130.2.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]