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Domain assignment for Solyc05g007890.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc05g007890.2.1
Domain Number 1 Region: 21-78
Classification Level Classification E-value
Superfamily Homeodomain-like 4.48e-16
Family GARP response regulators 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc05g007890.2.1
Sequence length 339
Comment genomic_reference:SL2.40ch05 gene_region:2340432-2342446 transcript_region:SL2.40ch05:2340432..2342446+ go_terms:GO:0003700 functional_description:"Myb family transcription factor-like (AHRD V1 *--* Q6H510_ORYSJ); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class "
Sequence
MALHQNAQQNKDMNLVLSSDAKPRLKWTPDLHQRFVDAVSQLGGPDKATPKSLMRVMNIH
GLTLYHLKSHLQKYRLGKSSVTDQSFDENKQEVKLDLCEIVPNDDDTKGNEISRGLKQRT
YFDTELPQSDHKLSLGVCDGSQNHMNESFQIARALQMQMDVQRKLHHQIEVQRHLQLRIE
AQGKYLQSVLKKAQETLAGYGTSSGVELAKAELSQLVSMVNMGCCPSSSLTEIDCSISKD
IENKTSKEGILCSIESSLTSSESSARKEGQNNSMNNKNTTCIGLPLNQESKGKKRGRHNI
CGDEQSSAKRYLETIDLNRKCPNEYDENVTKVIDLNEYS
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Identical sequences K4BWW4
Solyc05g007890.2.1 Solyc05g007890.2.1 XP_004238822.1.44838

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