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Domain assignment for Solyc05g013540.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc05g013540.1.1
Domain Number 1 Region: 50-107
Classification Level Classification E-value
Superfamily DNA-binding domain 4.9e-21
Family GCC-box binding domain 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc05g013540.1.1
Sequence length 386
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch05 gene_region:6814092-6815252 transcript_region:SL2.40ch05:6814092..6815252+ go_terms:GO:0003677,GO:0006355 functional_description:"Ethylene-responsive transcription factor ERF086 (AHRD V1 *-*- D7LXW6_ARALY); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding "
Sequence
MEDAMRRLNQETDVPLQNTTNSSTVNKTRSSCSSNKRSLKDTATGPSAVRYRGVRRRPWG
RYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPPCPTPTQPTST
NDALFNIHSSYKLTSPYYHQSSNTLKDLSNRPFFHSSSPYGSTGRAHVIGQKSNDSLNML
LFRELLSSNSSNNTNNLNVTSSMNMPNLYEQLPNFTMNRNTNSFGSYLPNSSNPVIPSSS
VMTTQVPKFDNTVHCTINNNNSSSGATANDDSAAGMDFFPSESSDSGLLEEALNGFFPKP
KPIKSVPSSLPNYEFCNIFSQQPQQQEQINNGGLNSDFGLLSSSLSSFPVDYFPGNLQVA
PGDNIMGDIFQYPDLLSIFAAKLQNA
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Identical sequences K4BY75
Solyc05g013540.1.1 XP_004239483.1.44838 Solyc05g013540.1.1

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