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Domain assignment for Solyc08g006270.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc08g006270.1.1
Domain Number 1 Region: 45-137
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.04e-19
Family B3 DNA binding domain 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc08g006270.1.1
Sequence length 195
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch08 gene_region:948787-953241 transcript_region:SL2.40ch08:948787..953241+ go_terms:GO:0006355 functional_description:"B3 domain-containing protein REM1 (AHRD V1 *-*- REM1_BRAOB); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MFEVVTNGKQPVWKIHHLTNPSTVEEPSENSVFKETAPHNPIGQSHFECFLRPYCISKGY
LRLPKQFSMANGLINKKCGLIIRDERERSWNLRLYTHNSIVHILGGWSEFCVANDLKEGD
YMMFEVVVNGEKPIWKFHNKPTPSIKSSRNVEAANHKPADHSRFVCTIKPYCLTYGYLCL
PKQFVDGISSVRHIA
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Identical sequences K4CIB6
Sopim08g006270.0.1 Solyc08g006270.1.1 Solyc08g006270.1.1

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