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Domain assignment for Solyc09g011750.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc09g011750.2.1
Domain Number 1 Region: 36-320
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 2.74e-46
Family Protein kinases, catalytic subunit 0.00065
Further Details:      
 
Domain Number 2 Region: 388-488
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000102
Family Tetratricopeptide repeat (TPR) 0.0067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc09g011750.2.1
Sequence length 491
Comment genomic_reference:SL2.40ch09 gene_region:5045721-5050019 transcript_region:SL2.40ch09:5045721..5050019+ go_terms:GO:0006468,GO:0005488 functional_description:"Receptor-like protein kinase At5g59670 (AHRD V1 *-*- RLK7_ARATH); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase "
Sequence
MGARCSKFSFCWWHSHLKPSLLDSSDLENGGKNEKNAFPVFTEFSLDELKMATNGFSSEN
IVSEHGEKAPNVVYKGLLENGRWVAVKRFNRSAWPDSRQFLDEARAVGNLRSERLANLIG
CCCEGEEKLLVAEFMPNETLAKHLFHWENQPMKWAMRLRVAFYLAQALDYCSSKGRALYH
DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVTPESVVYSFGT
MLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGSELVRLATRCLQYEARER
PNAKSLVTSLMSLQKETEVPSHVLLGIPHGTETPPQPLLLTPMGEACLRKDLTALHEILE
KSGYKDDEGIANELSFQMWTNQMQETLNSKKHGDAAFRAKDFITAIDCYTQFIDGGTMVS
PTVYARRCLCYLMSDLPQEALGDAMQAQVVFPEWPTAFYLQAAGLFVLGIENDAQEALKE
ATKLEAKRNKN
Download sequence
Identical sequences K4CRK1
Sopim09g011750.0.1 XP_004246370.1.44838 Solyc09g011750.2.1 Solyc09g011750.2.1

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