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Domain assignment for Solyc12g098460.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc12g098460.1.1
Domain Number 1 Region: 37-123
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.23e-22
Family B3 DNA binding domain 0.00076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc12g098460.1.1
Sequence length 209
Comment evidence_code:10F0H0E0IEG genomic_reference:SL2.40ch12 gene_region:64297007-64298215 transcript_region:SL2.40ch12:64297007..64298215+ go_terms:GO:0006355 functional_description:"Auxin response factor 4 (AHRD V1 *-*- D9HNT1_MAIZE); contains Interpro domain(s) IPR003340 Transcriptional factor B3 "
Sequence
MEGQSNNVSDSRLMKGVLDEQNSQPTMGNSESSLQQLFHKVLTPSDVGNKTFVIPRRYAL
KYFSHIQHNEEVDFYDSSTQSWRFKLFYCQSSKKFTFTRGWHKFVQAKNLKAGDTIIFNL
CEIKNGTHENSNTFVIDVVKNDEGLSMDLALNHNDVAVDVDAAPNDEGLPMDLALNHNDV
AVDVDAAPTPVLLFGKQIGWTKSKRGNEV
Download sequence
Identical sequences K4DHL9
Sopim12g098460.0.1 Solyc12g098460.1.1 Solyc12g098460.1.1

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