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Domain assignment for Solyc01g110300.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g110300.2.1
Domain Number 1 Region: 47-256
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 1.38e-22
Family BAR domain 0.048
Further Details:      
 
Domain Number 2 Region: 263-357
Classification Level Classification E-value
Superfamily SH3-domain 2.1e-16
Family SH3-domain 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc01g110300.2.1
Sequence length 368
Comment genomic_reference:SL2.40ch01 gene_region:88788002-88793586 transcript_region:SL2.40ch01:88788002..88793586- go_terms:GO:0030276 functional_description:"Clathrin binding protein (AHRD V1 **-* B6STF7_MAIZE); contains Interpro domain(s) IPR001452 Src homology-3 domain "
Sequence
MEAIRKQATRLREQVARQQQAVLKQFGAGGYGSDLVTDEAEMQQHHKLERLYISTRAAKH
FQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGTTLSKAALGFSRARAQME
KERGNLLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQEAEAQAVEVSRRQAKLRE
GTGHPDMAYKLEAAETKLDDLKSNTNTLGKEAAAAMAAVEAQQQRLTLQRLIAMVESERS
YHQRILQILDQLEAEMLSERQRIEAAPAPPLDTMPPPPSYEEVNGVSTSPVQNGSTDNMG
YFLGEVMYPYQAESDVELNLSVGEYIVIRKVSNNGWAEGECKGRAGWFPFGYIERRDRVL
ASKVAEVF
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Identical sequences K4B3P3
Solyc01g110300.2.1 Sopim01g110300.0.1 NP_001309916.1.44838 Solyc01g110300.2.1

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