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Domain assignment for Solyc10g007230.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g007230.1.1
Domain Number 1 Region: 129-229,273-352
Classification Level Classification E-value
Superfamily TPR-like 7.59e-26
Family Tetratricopeptide repeat (TPR) 0.0052
Further Details:      
 
Domain Number 2 Region: 372-483
Classification Level Classification E-value
Superfamily TPR-like 1.25e-24
Family Tetratricopeptide repeat (TPR) 0.0011
Further Details:      
 
Domain Number 3 Region: 447-582
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.000000000433
Family Thioltransferase 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc10g007230.1.1
Sequence length 596
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch10 gene_region:1650247-1653367 transcript_region:SL2.40ch10:1650247..1653367+ go_terms:GO:0030544 functional_description:"Tetratricopeptide repeat protein 2-like (AHRD V1 **-- Q5ZDK5_ORYSJ); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ "
Sequence
MWGSKKKSDSEKGSSSSADQMRFEEGDPRILKLGSPVSTLRSGMSSSNTTSTSGSSASGS
GRNVSSSSSSGSNRIKIVPPGNICPSGNVITGMRCKPERTVLNDSKMIPGIYGYGSIMPG
GAMQRTRCAEELNTQANEIYRKGNFAEALSLYDKAIAISPRDGRFHCNRAAALMGLKRII
EAVKECEEAIRLSPAYVRAHQRLGTLLLCLGQVENAREYLHCLDQKPDQATLEKLQAVEE
HIGKCAVARRSEDWTTMLKKAVAATTSGADASPQLFACQAEAHLKLHQLKDAELWIYKAR
TYELSATECRSKIFGMLSEAYIFFVQAQIDSSLGKFDDACTAIERAARIDLQSAEVTGKL
KNMRLVGKARTHGNEHFNAKRYAQACTAYGEGILLDSSNSVLYYNRANCWFKLGEWEKSL
DDCTHALLIRPQYTKALFRKAASNIKLERWADAVRDYEILRQELPSNEEVAENLSHARAE
LRKSRREGNGKVELVSDLDKFRAAIASGASVVCFDELSKPQGTWMSSVMDNLSAKYRSVI
FLKVDMEQSPAIATAEKVTVAPTFKLYKDGNRQVDTVTAIPDFLDFLIKDTLLDPI
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Identical sequences K4CXQ3
Sopim10g007230.0.1 Solyc10g007230.1.1 Solyc10g007230.1.1 XP_010327115.1.44838

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