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Domain assignment for Solyc10g007240.1.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g007240.1.1
Domain Number 1 Region: 369-479
Classification Level Classification E-value
Superfamily TPR-like 1.48e-25
Family Tetratricopeptide repeat (TPR) 0.0026
Further Details:      
 
Domain Number 2 Region: 127-218
Classification Level Classification E-value
Superfamily TPR-like 8.86e-25
Family Tetratricopeptide repeat (TPR) 0.0055
Further Details:      
 
Domain Number 3 Region: 448-579
Classification Level Classification E-value
Superfamily Thioredoxin-like 0.0000000211
Family Thioltransferase 0.0065
Further Details:      
 
Weak hits

Sequence:  Solyc10g007240.1.1
Domain Number - Region: 234-359
Classification Level Classification E-value
Superfamily TPR-like 0.00822
Family Tetratricopeptide repeat (TPR) 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc10g007240.1.1
Sequence length 594
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch10 gene_region:1660427-1662715 transcript_region:SL2.40ch10:1660427..1662715+ go_terms:GO:0004860 functional_description:"Tetratricopeptide repeat protein 2-like (AHRD V1 **-- Q5ZDK5_ORYSJ); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ "
Sequence
MNSTPLADRMKNDDPRILKLGSTLRTRMSCSTTGSSGQSVSSSGTGNSGSGSSSSSSRVE
IVPAGNICPSGKVITGMRSKPVRTVLSDNEMIPGMYGYGSIMPAGATRRTCGVSSSDTPE
SSLKINSEELKAKGNENYKKGNFLEALYFYDKAIAISPSDGRLRCNRAAALMGLKRMPEA
LKECEEAIRLAPAYVRAHQRLGSLLLSLGHVENARKCLFSLNQIPDEAELHKLETVENHI
NKCTEARRLGEWTSVLKEAEAATSRGAEASAQLFACQAEAHLKLHQLTDAELWMYKAKMY
EASARAYKSKNFGMISEAYILFVQAQIENTLGKFDNACAAIERAAQVDLQSSEVIGLLKN
MRLVGRARSLGNELFKSGRYIEACSAYGEGLSCDSLDPILYCNRAACWYKLKKWEKSLDD
CNRALLIRPQHTKALLRKAASNIKLGRWADAVRDYEILWQELPSSEEVAENLSHARAELT
KSHREGNGMVELVSDVDKFRAAIASGASVVYFHELSDPLCTWKSYVMGTLSAKYHSVIFL
KVDMKQSPAIATAENITVASTFKLYKDGSCKVDMVTATPDLLEFSIRDTLLCPI
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Identical sequences K4CXQ4
Solyc10g007240.1.1 XP_019071436.1.44838 Sopim10g007240.0.1 Solyc10g007240.1.1

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