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Domain assignment for Solyc10g009270.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc10g009270.2.1
Domain Number 1 Region: 215-282
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 4.06e-18
Family HLH, helix-loop-helix DNA-binding domain 0.0021
Further Details:      
 
Weak hits

Sequence:  Solyc10g009270.2.1
Domain Number - Region: 11-138
Classification Level Classification E-value
Superfamily GAF domain-like 0.00696
Family GAF domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc10g009270.2.1
Sequence length 393
Comment genomic_reference:SL2.40ch10 gene_region:3259314-3261680 transcript_region:SL2.40ch10:3259314..3261680+ go_terms:GO:0003700 functional_description:"BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding "
Sequence
MDEPIFSPSSSQSSLQHRLQYIVKNQTNYCSDWAYIIFWQSSNNRSCLTWGDGHLNMKIT
NNKDVEWFYLMSLAQSFCVGEGVVGKCFSSGSLVWLAGDQQFEFCHCERAKEAHYVHGIN
TFVCIPISSGVLELGSSTMIKQDLNLVQQVKSMFFGYETIDQFDDFGLFNCLELYGEEAK
KGEVVVGTTPHENKAGLKNKTSKKRRREICETQGNHVEAERQRREKLNSRFYALREVVPN
VTKMDKATLLSDAVTYITQLKAKVDELESKLHSNNYHYYYPEMKIKHKMENHDINVVDNQ
SSITTSRDHTMEIEVKMVGQDAMIRVQSENVNYPSTRLMCALQEVELHVYHANISSVNDF
MLHDIVVKVPQGLETEDEVKYALLRSLDQQTCS
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Identical sequences K4CYA3
Sopim10g009270.0.1 Solyc10g009270.2.1 XP_004248095.1.44838 Solyc10g009270.2.1

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