SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GRMZM2G020938_P03 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G020938_P03
Domain Number 1 Region: 166-333,414-557
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 9.08e-82
Family Protein kinases, catalytic subunit 0.00000857
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G020938_P03   Gene: GRMZM2G020938   Transcript: GRMZM2G020938_T03
Sequence length 583
Comment seq=translation; coord=4:161780180..161783390:-1; parent_transcript=GRMZM2G020938_T03; parent_gene=GRMZM2G020938
Sequence
MASKAMPQILPETPGIPGTKQCSKSAPPFELPQTNNSCASALTVLPGTTTDLSKSSHKPE
LNEQKPDHRLKEPVDAASVKFPVEPSKKAVAEHGSTNGGSTSFQTCGGTSQAQAKVSASA
KAADPPEIGDRGNSGRCRPSTSSDISDESSCSSMSNSTKPHKANDSRWEAIQTVRTRDGV
LGLSHFRLLKRLGCGDIGSVYLSELNGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQC
LDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHALRQRQPGKHFPEQAVKFYIAEVLLALE
YLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRSSNPDAEALRKNSHGY
CAQPACVEPSCVVQPSCAAPTTCFGPRLFSSKSKKERKPRPEAATPVNPWPELIAEPSDA
RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQ
QLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPE
VPKPVEIERPSNHPSSPSGAAADDASVGAPQKGVDGYLEFGFF
Download sequence
Identical sequences GRMZM2G020938_P02 GRMZM2G020938_P03 GRMZM2G020938_T02|PACid:20858721 GRMZM2G020938_T03|PACid:20858722 XP_008677207.1.34533 XP_020407127.1.34533

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]