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Domain assignment for GRMZM2G050709_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

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Strong hits

Sequence:  GRMZM2G050709_P01
Domain Number 1 Region: 96-170,275-302
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 0.0000000000209
Family alpha-D-mannose-specific plant lectins 0.01
Further Details:      
 
Weak hits

Sequence:  GRMZM2G050709_P01
Domain Number - Region: 381-424
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.000122
Family Pan module (APPLE domain) 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G050709_P01   Gene: GRMZM2G050709   Transcript: GRMZM2G050709_T01
Sequence length 516
Comment seq=translation; coord=10:4519493..4521476:-1; parent_transcript=GRMZM2G050709_T01; parent_gene=GRMZM2G050709
Sequence
MRQGKGDPAIAALAIAIAVVLLCVASSAVLAIDGAKAEEELPTQLLNGFAATHAAGSAAT
FEPVLYATSAVFALGFLRVGPASLDLAVVHLPSSFPVWRATPARLGDWSRPATLAFDDGT
LVLAGPDGAVLWRTLNTVGDTVALLNSSNLVVQRYENPQPAWQSFDHPADTLVVDQNFTA
SSSPLVSANRRFTLQLGRTYMAMHMQFDAGQAQAATAPVYWKHTALEAHLENATAPPVYG
RLDALGFFGLYLDGGGGQRVDVLSFDTFALNLTGVFRRMTLDDDGNLRAYYWTTGDSSAW
TSDYKAIAERCELPTSCGAYGVCVPGNAQCQCLDSNGTSTAPPCHGEDTADLCSTASSNG
ARQLGFDVVRRTRVSVAYKEELPFRTNTTADGCELACAGNCTCRGALYNGASGYCYLIDF
PVETLVYQADDRMLGYFKIRKAATANSARRGMSPGVTAATVALSLVLAGLAAAGAYWGYR
TWERRKRKRAGMEQELVPGPYRDLKSMASSNNSFKA
Download sequence
Identical sequences B4FB05
GRMZM2G050709_P01 GRMZM2G050709_T01|PACid:20872918 NP_001130912.1.34533

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