SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GRMZM2G418956_P01 from Zea mays subsp. mays

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GRMZM2G418956_P01
Domain Number 1 Region: 505-806
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 3.51e-72
Family Protein kinases, catalytic subunit 0.00016
Further Details:      
 
Domain Number 2 Region: 65-208
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.31e-25
Family alpha-D-mannose-specific plant lectins 0.0042
Further Details:      
 
Weak hits

Sequence:  GRMZM2G418956_P01
Domain Number - Region: 338-387
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.000471
Family Anti-platelet protein 0.072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: GRMZM2G418956_P01   Gene: GRMZM2G418956   Transcript: GRMZM2G418956_T01
Sequence length 826
Comment seq=translation; coord=9:78096122..78099163:1; parent_transcript=GRMZM2G418956_T01; parent_gene=GRMZM2G418956
Sequence
MNESSAAASSYLLLTLIIHLLPFVSAHDFLSAGSSLSVEHSSDVLHSQDGTFTCGFYRIS
PNASTFSIWFSGSSERTVVWSANPLHPVYTWGSKVELDADGSMVLKDYNGQIVWTNNASV
SDAGHVQARLLGTGNLAVEGRGGAILWQSFDSPTDTLLPTQRITASTKLVSTNRLLVPGH
YSFRFDDQYLLSLFDDEKNISFIYWPNPRMTIWAKGRVQFNSTMSGALDTLGHFLASDNA
TFTAADWGPGIMRRLTLDYDGNLRLYSLNVADRTWSVTWMAFPQLCNVHGLCGENGICVY
TPVPACACAPGFEVIDPSERSKGCRPKTNISCDVEKVDFAKLPHTDFLGYDMTAHHSVSL
DFCKKECLHDCNCKGFAYWEGIGDCYPKSVLVGGVTLQNFASTGTMYIKIPNGLQVLDAS
IPQSQPFGPKYSPDCGTTNRYFIADFLDKLKRDHSGSKYLYFYGFLSAIFLAEVVFVGLG
WFILRREYRELRGVWPAEPGYEMIANHFRRYAYRELVTATRKFKDELGRGASGIVYKGVL
EDKGAVAVKKLAEINQSEEEFRHELSVISMINHMNLVRVWGYCSDGPHRILVSECFENGS
LDKILFGSKGSEILLGWKQRFDIALGVARGLAYLHHECSEWVIHCDVKPENILLDENLVP
KIADFGLAKLLNRGRSNLNVSKIQGTRGYLAPEWVSSLPITAKVDVYSFGVVLLELLIGA
RVSNMGNDEDVEAEMVLGRVSRLVKEKLQSDDTEPSWIADFIDSRLNGDFNNLQARIMMR
LSISCLEEDRDRRPTMENAVQILVLTEDVSGANVMIPFVPSKLGVG
Download sequence
Identical sequences GRMZM2G418956_P01

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]