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  Home > Genomes > Harpegnathos saltator v3.3 > Hsal_01613--XP_001122457.1_APIME

Domain assignment for Hsal_01613--XP_001122457.1_APIME from Harpegnathos saltator v3.3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  Hsal_01613--XP_001122457.1_APIME
Domain Number 1 Region: 699-749
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000474
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 2 Region: 902-949
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000586
Family Laminin-type module 0.0022
Further Details:      
 
Domain Number 3 Region: 747-795
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000137
Family Laminin-type module 0.0083
Further Details:      
 
Domain Number 4 Region: 1005-1055
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000053
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 5 Region: 793-834
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000586
Family Laminin-type module 0.0069
Further Details:      
 
Domain Number 6 Region: 290-355
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000112
Family Laminin-type module 0.031
Further Details:      
 
Domain Number 7 Region: 464-503
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000335
Family Laminin-type module 0.0063
Further Details:      
 
Domain Number 8 Region: 954-1002
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000502
Family Laminin-type module 0.0025
Further Details:      
 
Domain Number 9 Region: 853-904
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000558
Family Laminin-type module 0.058
Further Details:      
 
Domain Number 10 Region: 227-292
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000698
Family Laminin-type module 0.077
Further Details:      
 
Domain Number 11 Region: 369-415
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000206
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 12 Region: 1053-1100
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000204
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 13 Region: 413-456
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000335
Family Laminin-type module 0.0043
Further Details:      
 
Weak hits

Sequence:  Hsal_01613--XP_001122457.1_APIME
Domain Number - Region: 47-125
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000149
Family N-terminal domain of xrcc1 0.067
Further Details:      
 
Domain Number - Region: 1137-1231
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000411
Family Spectrin repeat 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Hsal_01613--XP_001122457.1_APIME
Sequence length 1700
Comment [mRNA] [translate_table: standard]
Sequence 
QSSCYPATGNLLIGRKDKLSASSTCGLKGPERFCIVSHLKERKKCFFCDSSFPKRQHNIE
NIVSGSWWQAENGVENVTIRFDLEAEFHFTHIIIHFQTFRPAAMLIERSTDFGQTWQVYR
YFAHNCEHYFPGIPTHQPQRLTDVICETRYSAVAPSSGGDVIFRVLPQNLDIDNPYSKEV
QNLLKVTNLRINMTRLHTLGDDLLDDRAEIREKYYYAIQDMVIRGSCSCYGHASRCLPLP
GVIDEENMVHGRCECTHNTKGLNCEKCEDFYNDLPWKPAVGKQTNACRRCNCNNHTTSCH
FDEAVYDRSGRVSGGVCDDCQHNTRGQNCEQCKPFFYHDVTKDISDSAACQPCNCDLGGS
LDDGICDSRTDPLSGDESGRCHCKANVEGRRCDRCKNGFWNFNPDSPEGCQACTCNTLGT
VDNQGCNTVTGECTCKRYVTARDCNQCLPNYWGLSEDRDGCKPCDCDPGGSYEDSCDVIT
GQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRASDVLEDSVLNFTIDDIRKSMWY
DVIVRYEPVHHGVWNDLQLILERDDPPDPNGPCAEWTPEYDRLWAQLPIRSRSSVAQPSI
CLETGKRYNLVLQFRKFNGQTDVPSASILVDSIVLKPRIDVIPFFKTPGVGELRRQEYER
YHCNDFFNDVNVMWSDIPEICRKYQNSIGYYVFEGAHSCECNPTGSRSLLCENYGGMCPC
KPNVVGRRCDRCAPGTYGFSPEGCIPCDCDGVGALDNFCDVETGRCKCRRNTYGRTCGQC
EPGFWNFPHCQRCECNGHADSCDPKTGACINCRDYTTGHNCDRCIDTFYGDPRIGVDIPC
RACPCPGTLGSGHSYADGCSLDSITQDVVCECFEGYAGPRCEHCAENYFGNPEISGGSCI
RCECNNNTDLRQPGNCDPHNGRCLQCLHNTDGFNCQICKPGFYGNALRQECQDCSCNVLG
TDKAAGPCDHRTGQCPCLPHVIGQLCDSCEENHWRIASGEGCDPCECDAVGSVSDRCNPY
DGTCECRPGFGGRRCNECQTNFWGNPNIECYPCECDVIGSASQQCDRETGVCVCHKGIGG
EKCDQCDRGYHGEAPQCSPCGECFDNWDLILSGLRNKTDVVIDEASRIQKVGTSGVYSQE
FDDMEKSLNEIKALISNTTIRGQDLDALDILAAGLERNISESAQQLENVNNLLENVSQRV
NLGDVALKGLKNRTNSLHEAAAELKENATRLQEENVQGALNVTQQMAEQSRQAERMANDT
SNVLADAERFRKHTENLLAKNRATVDEAQERNKESLVRLNEKLRAFGMTMPGLNLQMCGD
NVTDCSTVCGGAGCGFCGGLSCDVGAVTKANQALDVAKQQATKIKSHKDEAEQLLRNMIQ
MKQDSTAARSNAQDAFNYAWDARNRSANVSKELLDITNRIWSNLNDEQPTPAMVRDLANK
VLEKNIQLEPDEITRLADRIKSIVGSLTDSEKILADTKDDLELARELEQRANRAKEAAVE
KQDSARQVILLLNDAQEAQEKAQNAIDKAEADVLKSQKDLADISDVTTAAQIQANNTTQS
VEALDTRLKQLQTQSVKNDFVLTKEISVEAKKVAEEARVIDGKTKKLSEVYKRADESLYQ
RVNKSKGDIQRAKRLLQRASELTADTSTKFKDLDGMESVYRDNERLLKDLMRDVDALTME
MERHLEEIEQKSQLYRQCSA
Download sequence
Identical sequences E2BB09
Hsal_01613--XP_001122457.1_APIME

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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