SUPERFAMILY 1.75 HMM library and genome assignments server

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EGF/Laminin superfamily domain assignments
in
Wuchereria bancrofti v1.0

Assignment details

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Wuchereria bancrofti v1.0 (Request) has 186 significant domains in 80 proteins.

     

Sequence ID   Evalue   Region   Family  
WUBG_00397T0   0.000000000042   180-218   EGF-type module  
  0.00000000134   41-80   EGF-type module  
  0.00000000712   144-186   EGF-type module  
  0.000000245   220-261   EGF-type module  
  0.0000138   294-328   EGF-type module  
  0.0000419   334-363   EGF-type module  
  0.000567   83-116   EGF-type module  
  0.0336   264-295   EGF-type module  
WUBG_00569T0   0.000000000642   40-81   Laminin-type module  
  0.0000000146   98-149   Laminin-type module  
  0.0733   141-181   Laminin-type module  
WUBG_00681T0   0.00000000931   112-152   EGF-type module  
  0.000000196   2-40   EGF-type module  
  0.00000122   40-74   EGF-type module  
  0.00000492   75-117   EGF-type module  
WUBG_00724T0   0.0000000474   478-525   EGF-type module  
  0.000288   337-368   EGF-type module  
  0.000583   127-169   EGF-type module  
  0.000765   534-572   EGF-type module  
  0.00437   104-124   EGF-type module  
  0.0802   273-325   EGF-type module  
WUBG_00827T0   0.0000000000279   962-1012   Laminin-type module  
  0.0000000000949   296-347   EGF-type module  
  0.00000000586   851-897   Laminin-type module  
  0.00000000628   752-803   Laminin-type module  
  0.0000000223   1010-1058   Laminin-type module  
  0.0000000248   458-513   Laminin-type module  
  0.0000012   411-458   Laminin-type module  
  0.00000126   924-964   Laminin-type module  
  0.00000544   808-853   Laminin-type module  
  0.000017   355-413   Laminin-type module  
  0.00257   714-754   EGF-type module  
WUBG_01144T0   0.00000000173   210-268   Laminin-type module  
  0.00000000248   266-319   Laminin-type module  
  0.0000000307   329-369   Laminin-type module  
WUBG_01297T0   0.0000136   123-159   EGF-type module  
  0.00391   90-111   EGF-type module  
  0.00689   197-222   EGF-type module  
WUBG_01648T0   0.00000000000958   150-195   EGF-type module  
  0.000000000255   1-41   EGF-type module  
WUBG_01700T0   0.000000769   463-499   EGF-type module  
WUBG_02233T0   0.0000379   2116-2155   EGF-type module  
  0.00293   2146-2188   EGF-type module  
WUBG_02258T0   0.000000239   329-364   EGF-type module  
WUBG_02693T0   0.0000151   195-230   EGF-type module  
  0.00133   135-172   EGF-type module  
WUBG_02714T0   0.00000193   187-225   Integrin beta EGF-like domains  
  0.00012   236-262   Integrin beta EGF-like domains  
  0.000335   157-188   Integrin beta EGF-like domains  
WUBG_02772T0   0.000000168   2-33   EGF-type module  
  0.00000021   32-77   EGF-type module  
  0.000000407   79-112   EGF-type module  
WUBG_02814T0   0.00000000213   140-183   EGF-type module  
  0.000441   113-154   EGF-type module  
WUBG_02835T0   0.00000000201   854-910   Laminin-type module  
  0.00138   910-955   Laminin-type module  
  0.0268   178-203   EGF-type module  
WUBG_02885T0   0.00000102   20-69   EGF-type module  
  0.0000168   63-103   EGF-type module  
  0.0000296   101-137   EGF-type module  
WUBG_03090T0   0.0000437   233-261   EGF-type module  
  0.00029   475-510   EGF-type module  
  0.00295   435-469   EGF-type module  
WUBG_03542T0   0.0000000325   716-754   EGF-type module  
  0.0000122   668-725   EGF-type module  
  0.000893   1061-1094   EGF-type module  
  0.00514   832-869   EGF-type module  
  0.00514   950-990   EGF-type module  
  0.0184   353-385   EGF-like domain of nidogen-1  
  0.046   1009-1041   EGF-type module  
  0.0568   897-930   EGF-type module  
  0.067   1146-1185   EGF-type module  
WUBG_03662T0   0.000000000563   624-667   EGF-type module  
  0.00000193   301-344   EGF-type module  
  0.000251   948-1000   EGF-type module  
WUBG_03671T0   0.0000000636   249-304   EGF-type module  
  0.00000413   291-344   EGF-type module  
  0.00028   85-125   EGF-type module  
  0.00746   405-437   EGF-type module  
WUBG_04138T0   0.000000757   26-59   EGF-type module  
WUBG_04297T0   0.00000000583   7-52   EGF-type module  
  0.00000101   48-78   EGF-type module  
WUBG_04436T0   0.0000000172   654-692   EGF-type module  
  0.000000246   695-736   EGF-type module  
  0.000000795   619-664   EGF-type module  
WUBG_04454T0   0.000000039   341-378   EGF-type module  
  0.0000000798   185-222   EGF-type module  
  0.000000629   145-190   EGF-type module  
  0.00000278   382-426   EGF-type module  
  0.0664   80-113   EGF-type module  
WUBG_04558T0   0.000000000979   248-293   EGF-type module  
  0.0972   502-531   EGF-type module  
WUBG_04634T0   0.000000778   3-36   EGF-type module  
  0.000419   51-86   EGF-type module  
WUBG_04731T0   0.0000000000116   451-493   EGF-type module  
  0.0000000000326   130-173   EGF-type module  
  0.00000000131   489-531   EGF-type module  
  0.00000000472   50-87   EGF-type module  
  0.00000000837   14-55   EGF-type module  
  0.0000000649   92-129   EGF-type module  
  0.00000377   411-455   EGF-type module  
  0.00000431   378-418   EGF-type module  
WUBG_04748T0   0.00000773   69-111   EGF-type module  
WUBG_04927T0   0.00000000124   520-562   EGF-type module  
  0.00000000921   601-639   EGF-type module  
  0.0000000328   484-528   EGF-type module  
  0.0000000486   441-483   EGF-type module  
  0.0000000884   569-606   EGF-type module  
  0.00000508   865-911   EGF-type module  
WUBG_05613T0   0.0000000143   5-39   EGF-type module  
WUBG_06399T0   0.00000456   18-64   EGF-type module  
WUBG_06594T0   0.000000000893   229-266   Merozoite surface protein 1 (MSP-1)  
WUBG_06758T0   0.00000000159   234-287   Laminin-type module  
  0.00000000558   126-178   Laminin-type module  
  0.000000725   184-236   Laminin-type module  
  0.0000026   334-383   Laminin-type module  
  0.0000145   81-128   Laminin-type module  
  0.00024   287-332   Laminin-type module  
WUBG_06766T0   0.00000466   444-476   EGF-like domain of nidogen-1  
  0.00000971   394-426   EGF-like domain of nidogen-1  
  0.000097   2-25   EGF-type module  
  0.000138   195-228   EGF-type module  
  0.000448   595-629   EGF-type module  
  0.00056   749-783   EGF-type module  
  0.000613   804-833   EGF-type module  
  0.000616   546-573   EGF-type module  
  0.000778   244-279   EGF-type module  
  0.00207   699-731   EGF-type module  
  0.0184   650-682   EGF-type module  
  0.0224   493-525   EGF-type module  
WUBG_06966T0   0.0000000918   793-830   EGF-type module  
  0.000000387   824-861   EGF-type module  
  0.00000186   2-34   EGF-type module  
  0.000838   544-597   EGF-type module  
  0.00896   68-99   EGF-type module  
WUBG_07113T0   0.000000137   322-362   Laminin-type module  
  0.000179   374-412   Laminin-type module  
WUBG_07403T0   0.0000000745   37-75   EGF-type module  
WUBG_07610T0   0.000000265   392-435   EGF-type module  
  0.0000113   361-406   EGF-type module  
WUBG_08179T0   0.00000000637   393-432   EGF-type module  
WUBG_08294T0   0.00000000197   78-115   EGF-type module  
  0.0000000173   2-37   EGF-type module  
  0.0000000245   40-77   EGF-type module  
  0.000000339   117-157   EGF-type module  
  0.0000541   151-183   EGF-type module  
  0.0000649   192-227   EGF-type module  
  0.00304   355-394   EGF-type module  
WUBG_08826T0   0.00000000146   318-371   Laminin-type module  
  0.0000000607   250-320   Laminin-type module  
  0.000179   455-489   Laminin-type module  
  0.0335   408-457   Laminin-type module  
WUBG_09517T0   0.00000447   242-274   EGF-type module  
  0.0000103   196-222   EGF-type module  
  0.0000572   29-65   EGF-type module  
  0.000628   82-120   EGF-type module  
WUBG_09573T0   0.0000347   158-183   EGF-type module  
  0.000179   61-86   EGF-type module  
  0.00024   91-117   Integrin beta EGF-like domains  
  0.000289   274-297   EGF-type module  
  0.000983   300-339   EGF-type module  
  0.00107   206-238   EGF-type module  
  0.00138   127-151   Integrin beta EGF-like domains  
  0.0147   246-266   EGF-type module  
WUBG_09576T0   0.0000488   186-214   EGF-type module  
  0.0000629   230-264   EGF-type module  
WUBG_09719T0   0.0000000000000419   11-61   EGF-type module  
  0.0000000000335   65-106   EGF-type module  
  0.000000375   92-139   EGF-type module  
WUBG_10008T0   0.00000509   123-148   EGF-type module  
  0.00335   190-221   EGF-type module  
  0.00497   84-122   EGF-type module  
  0.00528   14-49   EGF-type module  
  0.0342   156-183   EGF-type module  
WUBG_10646T0   0.0000000439   473-520   EGF-type module  
  0.0000000611   514-555   EGF-type module  
  0.0116   446-486   EGF-type module  
WUBG_10935T0   0.0000000044   43-102   Laminin-type module  
  0.000000279   170-227   Laminin-type module  
  0.00000642   100-156   Laminin-type module  
  0.0000114   239-277   Laminin-type module  
WUBG_10944T0   0.0000597   55-94   EGF-type module  
WUBG_11022T0   0.000000000128   351-401   Laminin-type module  
  0.00000000262   260-308   Laminin-type module  
  0.00000114   312-348   Laminin-type module  
  0.0000137   413-452   Laminin-type module  
WUBG_11024T0   0.00000000017   500-545   Laminin-type module  
  0.0000000017   387-428   Laminin-type module  
  0.00000000248   292-342   Laminin-type module  
  0.0000000184   340-389   Laminin-type module  
  0.000000201   16-55   Laminin-type module  
  0.000000502   448-502   Laminin-type module  
WUBG_11871T0   0.00000139   77-127   EGF-type module  
  0.00011   48-75   EGF-type module  
WUBG_12009T0   0.000000000446   139-187   Laminin-type module  
  0.000000000809   93-141   Laminin-type module  
  0.0000000753   185-233   Laminin-type module  
  0.000000195   1-48   Laminin-type module  
  0.000000419   231-278   Laminin-type module  
  0.000000781   46-87   Laminin-type module  
WUBG_12016T0   0.0000000128   121-172   EGF-type module  
  0.0000000357   259-298   EGF-type module  
  0.0000000905   2-34   EGF-type module  
  0.000000392   41-77   EGF-type module  
  0.000000996   300-339   EGF-type module  
  0.0028   211-248   EGF-type module  
WUBG_12088T0   0.00000000103   98-148   Laminin-type module  
  0.000000335   151-191   Laminin-type module  
  0.000000363   9-45   Laminin-type module  
  0.000000949   61-100   Laminin-type module  
WUBG_12162T0   0.0000547   376-411   EGF-type module  
WUBG_12286T0   0.0000000000614   157-207   Laminin-type module  
  0.00000000142   40-88   Laminin-type module  
  0.00000000502   118-159   Laminin-type module  
  0.0000000103   256-297   Laminin-type module  
  0.00000474   209-251   Laminin-type module  
  0.000893   4-42   EGF-type module  
WUBG_12716T0   0.000003   268-301   EGF-type module  
  0.0000377   311-350   EGF-type module  
  0.000117   119-149   EGF-type module  
  0.000193   166-199   EGF-type module  
  0.000399   215-246   EGF-type module  
WUBG_12932T0   0.0000000000533   155-202   EGF-type module  
  0.0000000547   127-167   EGF-type module  
WUBG_13260T0   0.00000000036   1-36   EGF-type module  
WUBG_13357T0   0.00000000046   54-95   EGF-type module  
  0.0000000712   12-58   EGF-type module  
WUBG_13382T0   0.0000000373   3-35   EGF-type module  
  0.00000167   50-83   EGF-like domain of nidogen-1  
WUBG_13500T0   0.000000000181   126-175   Laminin-type module  
  0.000073   90-128   EGF-type module  
WUBG_13590T0   0.0000067   62-109   Laminin-type module  
  0.000017   6-58   Laminin-type module  
WUBG_13970T0   0.0000000267   1-46   EGF-type module  
WUBG_14137T0   0.0000000167   149-187   Integrin beta EGF-like domains  
  0.00000307   192-236   Integrin beta EGF-like domains  
  0.00865   114-140   Integrin beta EGF-like domains  
WUBG_15001T0   0.0000000363   16-76   Laminin-type module  
WUBG_15146T0   0.000000272   83-122   EGF-type module  
  0.00000129   119-155   EGF-type module  
WUBG_16171T0   0.000000109   78-114   EGF-type module  
WUBG_16698T0   0.000000978   31-65   EGF-type module  
  0.0000355   84-113   Merozoite surface protein 1 (MSP-1)  
WUBG_16853T0   0.000000119   65-99   EGF-type module  
WUBG_16924T0   0.000000154   34-71   EGF-type module  
  0.00216   16-32   EGF-type module  
WUBG_17762T0   0.000000000781   2-49   Laminin-type module  
  0.000000000921   97-145   Laminin-type module  
  0.0000106   50-94   Laminin-type module  
WUBG_17863T0   0.0000000686   97-135   EGF-type module  
WUBG_18205T0   0.0000013   12-54   EGF-like domain of nidogen-1  
WUBG_18290T0   0.0000000251   132-184   Laminin-type module  
  0.0000000628   75-127   Laminin-type module  
  0.0132   31-51   EGF-type module  
WUBG_18320T0   0.00000128   9-51   EGF-type module  
WUBG_18350T0   0.00000000127   24-65   EGF-type module  
  0.000107   6-27   EGF-type module  
  0.00171   62-89   EGF-type module  
WUBG_19027T0   0.0000703   35-61   EGF-type module  
 
Weak hits:
WUBG_00074T0   0.01   186-215   EGF-type module  
WUBG_00220T0   0.000578   27-61   EGF-type module  
WUBG_00836T0   0.0605   183-216   EGF-type module  
WUBG_01729T0   0.000289   135-166   EGF-type module  
  0.00148   74-105   EGF-type module  
  0.00595   177-202   EGF-type module  
  0.00636   111-134   Integrin beta EGF-like domains  
  0.0193   50-77   EGF-type module  
WUBG_02596T0   0.00203   8-43   EGF-type module  
WUBG_02626T0   0.0115   85-109   EGF-type module  
  0.0521   29-71   Integrin beta EGF-like domains  
WUBG_02771T0   0.00419   1131-1162   EGF-type module  
  0.00441   665-690   EGF-type module  
WUBG_03746T0   0.00433   198-241   Laminin-type module  
  0.00823   652-682   EGF-type module  
  0.00837   364-413   Laminin-type module  
  0.0209   733-768   EGF-type module  
  0.0318   139-188   EGF-type module  
  0.0698   523-568   Laminin-type module  
WUBG_04635T0   0.00602   12-50   EGF-type module  
WUBG_04736T0   0.012   243-275   EGF-type module  
WUBG_05000T0   0.0611   505-536   EGF-type module  
WUBG_08812T0   0.000342   134-176   EGF-type module  
WUBG_10400T0   0.00495   353-379   EGF-type module  
WUBG_11150T0   0.00251   31-73   Integrin beta EGF-like domains  
WUBG_11615T0   0.00865   76-106   EGF-type module  
  0.016   130-144   Integrin beta EGF-like domains  
WUBG_12302T0   0.000398   186-225   EGF-type module  
  0.0405   106-151   Laminin-type module  
  0.0463   64-89   EGF-type module  
WUBG_12353T0   0.00628   309-342   EGF-type module  
  0.0116   101-146   Laminin-type module  
  0.0612   270-314   Laminin-type module  
WUBG_13465T0   0.000425   2-46   EGF-type module  
WUBG_13862T0   0.00184   95-141   Laminin-type module  
  0.00314   3-38   EGF-type module  
WUBG_14177T0   0.000469   8-34   Laminin-type module  
WUBG_14395T0   0.00512   33-69   EGF-type module  
WUBG_15142T0   0.0012   231-257   EGF-type module  
WUBG_15255T0   0.00272   41-79   EGF-type module  
WUBG_15293T0   0.00983   21-41   EGF-type module  
WUBG_15939T0   0.00298   11-42   EGF-type module  
WUBG_16070T0   0.012   115-145   EGF-type module  
WUBG_17641T0   0.000979   38-69   EGF-type module  
WUBG_18008T0   0.00452   26-67   EGF-type module  
WUBG_18608T0   0.0102   24-47   EGF-type module  
WUBG_19127T0   0.00272   7-56   EGF-type module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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