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DPY module superfamily domain assignments
in
Drosophila simulans 1.3

Network of domain occurrence in all genomes

Assignment details

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Drosophila simulans 1.3 has 26 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
FBpp0221102   0.00000235   1935-1958   DPY module  
  0.00000445   3001-3024   DPY module  
  0.00000785   2264-2287   DPY module  
  0.00000798   2686-2709   DPY module  
  0.00000824   3129-3152   DPY module  
  0.000017   2903-2926   DPY module  
  0.0000196   3234-3257   DPY module  
  0.0000222   1831-1854   DPY module  
  0.0000379   2583-2606   DPY module  
  0.0000484   1723-1746   DPY module  
  0.000196   2792-2815   DPY module  
  0.00157   2039-2062   DPY module  
  0.0667   1109-1131   DPY module  
  0.0706   2150-2173   DPY module  
FBpp0221103   0.00000157   153-176   DPY module  
  0.00000262   1678-1701   DPY module  
  0.00000275   1111-1134   DPY module  
  0.00000353   1356-1379   DPY module  
  0.00000392   258-281   DPY module  
  0.00000458   538-561   DPY module  
  0.00000759   2213-2236   DPY module  
  0.00000981   1569-1592   DPY module  
  0.0000105   1463-1486   DPY module  
  0.0000196   2105-2128   DPY module  
  0.0000288   429-452   DPY module  
  0.0000327   42-65   DPY module  
  0.000034   645-668   DPY module  
  0.0000418   2000-2023   DPY module  
  0.0000484   361-384   DPY module  
  0.0000484   1785-1808   DPY module  
  0.00196   2849-2871   DPY module  
  0.00772   3102-3124   DPY module  
  0.00824   3040-3060   DPY module  
  0.0116   2923-2943   DPY module  
  0.0144   2596-2618   DPY module  
  0.0327   2529-2552   DPY module  
  0.034   2414-2434   DPY module  
  0.0523   2787-2807   DPY module  
  0.0641   2726-2746   DPY module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   33095 33095
No Yes Danaus plexippus OGS1.0 Monarch butterfly 47 1
No Yes Heliconius melpomene Postman butterfly 27 1
No Yes Bombyx mori Domestic silkworm 43 5
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 61 19
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 36 1
No Yes Linepithema humile v1.1 Argentine ant 42 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 47 5
No Yes Solenopsis invicta v.2.2.3 Red fire ant 36 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 36 1
No Yes Atta cephalotes v1.1   15 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 36 2
No Yes Lucilia cuprina Australian sheep blowfly 68 3
No Yes Drosophila grimshawi 1.3   11 2
No Yes Drosophila willistoni 1.3   8 2
No Yes Drosophila pseudoobscura 2.13   43 2
No Yes Drosophila persimilis 1.3   5 3
No Yes Drosophila suzukii   47 2
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   26 2
No Yes Drosophila sechellia 1.3   39 2
No Yes Drosophila melanogaster 76_5 Fruit fly 577 19
No Yes Drosophila erecta 1.3   3 2
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   52 2
No Yes Drosophila mojavensis 1.3   13 2
No Yes Megaselia scalaris 22   31 5
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 43 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 67 3
No Yes Anopheles darlingi 22 American malaria mosquito 6 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 23 2
No Yes Tribolium castaneum 3.0 Red flour beetle 68 1
No Yes Rhodnius prolixus 22   12 2
No Yes Daphnia pulex Common water flea 25 4
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 48 4
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 23 2
No Yes Heliconius numata (Incomplete)   6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 46 2
No Yes NCBI 2017_08 genome   19349 605
No Yes STRING v9.0.5 (STRING)   379 28
No Yes Uniprot 2018_03 genome   10774 802
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2 2

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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