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Variable surface antigen VlsE superfamily domain assignments
in
Borrelia recurrentis A1

Network of domain occurrence in all genomes


Assignment details

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Borrelia recurrentis A1 has 18 significant domains in 17 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|203287472|ref|YP_002222487.1|   1.31e-68   59-370   Variable surface antigen VlsE  
gi|203287473|ref|YP_002222488.1|   4.18e-64   30-296   Variable surface antigen VlsE  
  0.00000981   300-337   Variable surface antigen VlsE  
gi|203288380|ref|YP_002223648.1|   3.4e-80   43-347   Variable surface antigen VlsE  
gi|203288393|ref|YP_002223660.1|   3.4e-84   37-341   Variable surface antigen VlsE  
gi|203288398|ref|YP_002223665.1|   8.63e-84   62-363   Variable surface antigen VlsE  
gi|203288402|ref|YP_002223688.1|   1.83e-47   77-370   Variable surface antigen VlsE  
gi|203288414|ref|YP_002223700.1|   6.67e-47   77-370   Variable surface antigen VlsE  
gi|203288424|ref|YP_002223775.1|   3.01e-81   21-322   Variable surface antigen VlsE  
gi|203288425|ref|YP_002223776.1|   2.75e-65   22-325   Variable surface antigen VlsE  
gi|203288430|ref|YP_002223781.1|   3.53e-64   30-323   Variable surface antigen VlsE  
gi|203288432|ref|YP_002223783.1|   2.88e-83   59-356   Variable surface antigen VlsE  
gi|203288434|ref|YP_002223785.1|   9.42e-84   62-363   Variable surface antigen VlsE  
gi|203288453|ref|YP_002223815.1|   3.01e-81   21-322   Variable surface antigen VlsE  
gi|203288454|ref|YP_002223816.1|   2.22e-65   22-325   Variable surface antigen VlsE  
gi|203288459|ref|YP_002223821.1|   3.53e-64   30-323   Variable surface antigen VlsE  
gi|203288461|ref|YP_002223823.1|   2.88e-83   59-356   Variable surface antigen VlsE  
gi|203288463|ref|YP_002223825.1|   9.42e-84   62-363   Variable surface antigen VlsE  

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Select to display   Genome       Domains   Proteins
No Yes ALL   5226 5226
No Yes Borrelia afzelii PKo   4 3
No Yes Borrelia burgdorferi B31   1 1
No Yes Borrelia recurrentis A1   18 17
No Yes Borrelia duttonii Ly   68 68
No Yes Borrelia crocidurae str. Achema   156 156
No Yes Borrelia hermsii DAH   18 18
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Borrelia valaisiana VS116   5 3
No Yes Borrelia afzelii PKo   4 3
No Yes Borrelia burgdorferi JD1   2 2
No Yes NCBI 2017_08 genome   1425 1334
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   95 88
No Yes Uniprot 2018_03 genome   2971 2889
No Yes NCBI plasmid sequences (Plasmids)   429 338
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes UniProt viral sequences (Viral)   1 1

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