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At5g01610-like superfamily domain assignments
in
Medicago truncatula

Network of domain occurrence in all genomes


Assignment details

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Medicago truncatula has 29 significant domains in 29 proteins.

     

Sequence ID   Evalue   Region   Family  
Medtr1g084200.1   3.14e-38   7-143   At5g01610-like  
Medtr1g088250.1   1.7e-43   6-142   At5g01610-like  
Medtr1g088260.1   9.29e-38   2-113   At5g01610-like  
Medtr2g010970.1   2.48e-34   11-142   At5g01610-like  
Medtr2g010970.2   2.09e-28   10-115   At5g01610-like  
Medtr2g019480.1   2.09e-31   12-150   At5g01610-like  
Medtr2g046150.1   3.79e-38   8-150   At5g01610-like  
Medtr2g091210.1   5.23e-34   5-134   At5g01610-like  
Medtr2g091215.1   4.97e-38   4-133   At5g01610-like  
Medtr4g014490.1   3.53e-50   3-170   At5g01610-like  
Medtr4g064460.1   2.75e-29   11-147   At5g01610-like  
Medtr4g081560.1   2.09e-37   8-145   At5g01610-like  
Medtr4g091930.1   9.55e-30   8-145   At5g01610-like  
Medtr4g091970.1   9.68e-28   9-145   At5g01610-like  
Medtr4g091980.1   5.23e-28   13-144   At5g01610-like  
Medtr4g109140.1   3.66e-46   3-172   At5g01610-like  
Medtr4g122930.1   7.19e-30   6-139   At5g01610-like  
Medtr5g043190.1   9.15e-47   15-178   At5g01610-like  
Medtr6g086680.1   9.68e-34   21-151   At5g01610-like  
Medtr7g053107.1   4.32e-39   11-151   At5g01610-like  
Medtr7g053107.2   4.32e-39   11-151   At5g01610-like  
Medtr7g070000.1   2.22e-49   3-169   At5g01610-like  
Medtr7g080280.1   7.85e-42   7-155   At5g01610-like  
Medtr7g103200.1   5.75e-41   3-143   At5g01610-like  
Medtr7g108775.1   5.75e-43   6-148   At5g01610-like  
Medtr7g108775.2   3.27e-43   6-148   At5g01610-like  
Medtr7g111900.1   2.22e-40   3-142   At5g01610-like  
Medtr8g085580.1   1.31e-41   9-143   At5g01610-like  
Medtr8g085590.1   3.27e-38   11-145   At5g01610-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   9154 9154
No Yes Selaginella moellendorffii   14 14
No Yes Pinus taeda Loblolly pine 31 30
No Yes Picea abies Norway spruce 37 35
No Yes Eucalyptus grandis v201 Rose gum 37 37
No Yes Theobroma cacao B97-61/B2 v1 Cacao 21 20
No Yes Gossypium raimondii v221   54 54
No Yes Citrus clementina v165   25 25
No Yes Citrus sinensis v154 Sweet orange 26 26
No Yes Thellungiella halophila v173   27 27
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 41 41
No Yes Capsella rubella v183   22 22
No Yes Arabidopsis lyrata Lyrate rockcress 22 22
No Yes Arabidopsis thaliana 10 Thale cress 24 24
No Yes Carica papaya Papaya 17 17
No Yes Medicago truncatula Barrel medic 29 29
No Yes Phaseolus vulgaris v186 French bean 23 23
No Yes Glycine max v109 Soybean 41 41
No Yes Cucumis sativus v122 Cucumber 23 23
No Yes Fragaria vesca Wild strawberry 23 23
No Yes Malus domestica v196 Apple 53 49
No Yes Prunus persica v139 Peach 20 20
No Yes Linum usitatissimum v200 Flax 46 46
No Yes Manihot esculenta v147 Cassava 29 29
No Yes Populus trichocarpa v156 Black cottonwood 34 34
No Yes Vitis vinifera Wine grape 19 19
No Yes Mimulus guttatus v140 Spotted monkey flower 25 25
No Yes Solanum lycopersicum v.2.3 Tomato 26 26
No Yes Solanum tuberosum Potato 37 37
No Yes Actinidia chinensis Hongyang   38 38
No Yes Aquilegia coerulea v195   18 18
No Yes Triticum urartu 22   38 37
No Yes Triticum aestivum 22 Bread wheat 107 107
No Yes Aegilops tauschii 22   35 34
No Yes Brachypodium distachyon Stiff brome 37 37
No Yes Oryza barthii 22 African wild rice 43 39
No Yes Oryza meridionalis 22   40 38
No Yes Oryza glumaepatula 22   49 38
No Yes Oryza glaberrima African rice 30 30
No Yes Oryza punctata 22   43 41
No Yes Oryza nivara 22   46 44
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 42 42
No Yes Oryza sativa v193 Rice 42 42
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 26 26
No Yes Panicum virgatum v202 Switchgrass 92 92
No Yes Setaria italica v164 Foxtail millet 52 52
No Yes Zea mays subsp. mays Maize 50 50
No Yes Zea mays v181 Maize 51 51
No Yes Sorghum bicolor Sorghum 50 50
No Yes Musa balbisiana Balbis banana 42 42
No Yes Musa acuminata 22 Wild Malaysian banana 30 30
No Yes Amborella trichopoda 22   15 15
No Yes Physcomitrella patens   8 8
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 21 21
No Yes Hordeum vulgare 22 Domesticated barley 39 39
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 43 43
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Pinus sylvestris (Incomplete) Scots pine 6 6
No Yes Picea sitchensis (Incomplete) Sitka spruce 15 15
No Yes Lotus japonicus (Early assembly)   23 23
No Yes Malus x domestica (Duplicate) Apple 53 49
No Yes Ricinus communis (Early assembly) Castor bean 21 21
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   55 51
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 26 26
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 26 26
No Yes Phoenix dactylifera (Early draft) Date palm 10 10
No Yes Arabidopsis thaliana 10 Thale cress 22 22
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   2512 2506
No Yes STRING v9.0.5 (STRING)   263 263
No Yes Uniprot 2018_03 genome   3279 3233
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   27 27

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