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SOCS box-like superfamily domain assignments
in
Tetraodon nigroviridis 76_8

Assignment details

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Tetraodon nigroviridis 76_8 has 38 significant domains in 38 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTNIP00000001409   0.00000000000157   309-350   SOCS box-like  
ENSTNIP00000001838   0.00000000000353   471-510   SOCS box-like  
ENSTNIP00000001851   0.0000000144   171-219   SOCS box-like  
ENSTNIP00000002241   0.000000000288   152-200   SOCS box-like  
ENSTNIP00000002256   0.0000000000523   439-494   SOCS box-like  
ENSTNIP00000004387   0.000000235   314-357   SOCS box-like  
ENSTNIP00000004953   0.00000000000209   351-389   SOCS box-like  
ENSTNIP00000005789   0.00000000000249   433-472   SOCS box-like  
ENSTNIP00000005820   0.000000445   226-271   SOCS box-like  
ENSTNIP00000007098   0.0000116   261-309   SOCS box-like  
ENSTNIP00000007477   0.00000000275   163-212   SOCS box-like  
ENSTNIP00000007650   0.00000000222   379-423   SOCS box-like  
ENSTNIP00000008096   0.00000144   239-279   SOCS box-like  
ENSTNIP00000008851   0.0000000000000262   153-200   SOCS box-like  
ENSTNIP00000009051   0.00000000000353   474-513   SOCS box-like  
ENSTNIP00000009476   0.000000249   268-313   SOCS box-like  
ENSTNIP00000010998   0.00000000000109   493-531   SOCS box-like  
ENSTNIP00000011335   0.00000301   417-459   SOCS box-like  
ENSTNIP00000011744   0.0000000209   279-324   SOCS box-like  
ENSTNIP00000014234   0.0000000000902   189-228   SOCS box-like  
ENSTNIP00000014843   0.0000000523   196-247   SOCS box-like  
ENSTNIP00000015046   0.00000000017   189-228   SOCS box-like  
ENSTNIP00000015878   0.0000000916   218-259   SOCS box-like  
ENSTNIP00000016007   0.000000209   111-150   SOCS box-like  
ENSTNIP00000016402   0.00000235   372-412   SOCS box-like  
ENSTNIP00000016915   0.00000222   251-291   SOCS box-like  
ENSTNIP00000017333   0.0000418   236-273   SOCS box-like  
ENSTNIP00000017807   0.0000000000863   174-214   SOCS box-like  
ENSTNIP00000018163   0.000011   244-287   SOCS box-like  
ENSTNIP00000018206   0.000034   234-271   SOCS box-like  
ENSTNIP00000018688   0.00000000366   378-415   SOCS box-like  
ENSTNIP00000019096   0.0000732   223-268   SOCS box-like  
ENSTNIP00000020228   0.00000000000116   487-528   SOCS box-like  
ENSTNIP00000020505   0.0000000288   483-527   SOCS box-like  
ENSTNIP00000020643   0.000000000288   452-507   SOCS box-like  
ENSTNIP00000021658   0.00000000458   476-529   SOCS box-like  
ENSTNIP00000021987   0.00000000000144   259-297   SOCS box-like  
ENSTNIP00000022809   0.00000000000222   391-430   SOCS box-like  
 
Weak hits:
ENSTNIP00000005676   0.0641   232-253   SOCS box-like  
ENSTNIP00000006038   0.034   109-130   SOCS box-like  
ENSTNIP00000008145   0.00017   109-156   SOCS box-like  
ENSTNIP00000011342   0.0275   320-339   SOCS box-like  
ENSTNIP00000013317   0.0194   533-574   SOCS box-like  
ENSTNIP00000014019   0.000173   248-285   SOCS box-like  
ENSTNIP00000014530   0.0314   287-323   SOCS box-like  
ENSTNIP00000017701   0.00602   182-209   SOCS box-like  
ENSTNIP00000018860   0.000109   273-314   SOCS box-like  
ENSTNIP00000018861   0.000109   275-316   SOCS box-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   29430 29430
No Yes Homo sapiens 76_38 Human 79 79
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 36 36
No Yes Gorilla gorilla 76_3.1 Western gorilla 39 39
No Yes Pongo abelii 76_2 Sumatran orangutan 29 29
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 37 37
No Yes Papio anubis 76 Olive baboon 33 33
No Yes Macaca mulatta 76_1 Rhesus monkey 40 40
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 65 65
No Yes Otolemur garnettii 76_3 Small-eared galago 32 32
No Yes Microcebus murinus 76_1 Gray mouse lemur 21 21
No Yes Rattus norvegicus 76_5.0 Norway rat 35 35
No Yes Mus musculus 76_38 House mouse 56 56
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 32 32
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 31 31
No Yes Cavia porcellus 76_3 Domestic guinea pig 30 30
No Yes Oryctolagus cuniculus 76_2 Rabbit 31 31
No Yes Ochotona princeps 76 American pika 23 23
No Yes Tupaia belangeri 76 Northern tree shrew 20 20
No Yes Sus scrofa 76_10.2 Pig 31 31
No Yes Bos taurus 76_3.1 Cattle 33 33
No Yes Ovis aries 76_3.1 Sheep 32 32
No Yes Vicugna pacos 76_1 Alpaca 20 20
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 30 30
No Yes Mustela putorius furo 76_1.0 Domestic ferret 30 30
No Yes Ailuropoda melanoleuca 76_1 Giant panda 32 32
No Yes Canis familiaris 76_3.1 Dog 32 32
No Yes Felis catus 76_6.2 Domestic cat 32 32
No Yes Equus caballus 76_2 Horse 30 30
No Yes Myotis lucifugus 76_2.0 Little brown bat 29 29
No Yes Pteropus vampyrus 76_1 Large flying fox 27 27
No Yes Sorex araneus 76_1 European shrew 11 11
No Yes Erinaceus europaeus 76 Western European hedgehog 13 13
No Yes Procavia capensis 76_1 Cape rock hyrax 23 23
No Yes Loxodonta africana 76_3 African savanna elephant 34 34
No Yes Echinops telfairi 76 Small Madagascar hedgehog 19 19
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 34 34
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 17
No Yes Macropus eugenii 76_1.0 Tammar wallaby 22 22
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 37 37
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 76_5 Platypus 16 16
No Yes Saccoglossus kowalevskii v3.0   45 45
No Yes Petromyzon marinus 76_7.0 Sea lamprey 15 15
No Yes Meleagris gallopavo 76_2 Turkey 29 29
No Yes Gallus gallus 76_4 Chicken 30 30
No Yes Anas platyrhynchos 76_1.0 Mallard 26 26
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 26 26
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 28 28
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 31 31
No Yes Anolis carolinensis 76_2.0 Green anole 28 28
No Yes Xenopus laevis African clawed frog 44 44
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 27 27
No Yes Latimeria chalumnae 76_1 Coelacanth 38 38
No Yes Lepisosteus oculatus 76 Spotted gar 37 37
No Yes Gadus morhua 76_1 Atlantic cod 33 33
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 38 38
No Yes Takifugu rubripes 76_4 Torafugu 59 59
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 38 38
No Yes Oryzias latipes 76_1 Japanese medaka 35 35
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 40 40
No Yes Poecilia formosa 76 Amazon molly 39 39
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 40 40
No Yes Astyanax mexicanus 76 Mexican tetra 38 38
No Yes Danio rerio 76_9 Zebrafish 63 63
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 9 9
No Yes Ciona intestinalis 76 Vase tunicate 6 6
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 15 15
No Yes Adineta vaga   11 11
No Yes Octopus bimaculoides 280   36 36
No Yes Crassostrea gigas 22 Pacific oyster 32 32
No Yes Lottia gigantea Owl limpet 21 21
No Yes Helobdella robusta   13 13
No Yes Capitella sp. I   33 33
No Yes Danaus plexippus OGS1.0 Monarch butterfly 8 8
No Yes Heliconius melpomene Postman butterfly 6 6
No Yes Bombyx mori Domestic silkworm 3 3
No Yes Nasonia vitripennis Jewel wasp 4 4
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 12 12
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 11 11
No Yes Linepithema humile v1.1 Argentine ant 7 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 8 8
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 8 8
No Yes Atta cephalotes v1.1   8 8
No Yes Camponotus floridanus v3.3 Florida carpenter ant 9 9
No Yes Lucilia cuprina Australian sheep blowfly 6 6
No Yes Drosophila grimshawi 1.3   8 8
No Yes Drosophila willistoni 1.3   8 8
No Yes Drosophila pseudoobscura 2.13   8 8
No Yes Drosophila persimilis 1.3   6 6
No Yes Drosophila suzukii   7 6
No Yes Drosophila yakuba 1.3   8 8
No Yes Drosophila simulans 1.3   7 7
No Yes Drosophila sechellia 1.3   8 8
No Yes Drosophila melanogaster 76_5 Fruit fly 23 23
No Yes Drosophila erecta 1.3   7 7
No Yes Drosophila ananassae 1.3   8 8
No Yes Drosophila virilis 1.2   8 8
No Yes Drosophila mojavensis 1.3   9 9
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 13 13
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 5
No Yes Anopheles darlingi 22 American malaria mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 8 8
No Yes Tribolium castaneum 3.0 Red flour beetle 10 10
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 5
No Yes Acyrthosiphon pisum Pea aphid 8 8
No Yes Rhodnius prolixus 22   9 9
No Yes Daphnia pulex Common water flea 9 9
No Yes Strigamia maritima 22   14 14
No Yes Sarcoptes scabiei   3 3
No Yes Tetranychus urticae Two-spotted spider mite 6 6
No Yes Ixodes scapularis (Preliminary) Black-legged tick 10 10
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   7 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 5 5
No Yes Caenorhabditis japonica   2 2
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis elegans 76_235 Roundworm 3 3
No Yes Caenorhabditis briggsae 2   2 2
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   4 4
No Yes Echinococcus granulosus   4 4
No Yes Taenia solium Pork tapeworm 4 4
No Yes Schistosoma mansoni   5 5
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   16 16
No Yes Nematostella vectensis 1.0 Starlet sea anemone 12 12
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   6 6
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 51 51
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 14 14
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 10 10
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 86 86
No Yes Homo sapiens (NCBI version) Human 53 53
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 33 33
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Homo sapiens 69_37 Human 35 35
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 34 34
No Yes Gorilla gorilla 69_3.1 Western gorilla 34 34
No Yes Pongo abelii 69_2 Sumatran orangutan 28 28
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 33 33
No Yes Macaca mulatta 69_1 Rhesus monkey 31 31
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 34 34
No Yes Otolemur garnettii 69_3 Small-eared galago 32 32
No Yes Microcebus murinus 69_1 Gray mouse lemur 21 21
No Yes Rattus norvegicus 69_3.4 Norway rat 30 30
No Yes Mus musculus 69_38 House mouse 33 33
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 22
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 30 30
No Yes Cavia porcellus 69_3 Domestic guinea pig 30 30
No Yes Oryctolagus cuniculus 69_2 Rabbit 30 30
No Yes Ochotona princeps 69 American pika 23 23
No Yes Tupaia belangeri 69 Northern tree shrew 20 20
No Yes Sus scrofa 69_10.2 Pig 28 28
No Yes Bos taurus 69_3.1 Cattle 31 31
No Yes Vicugna pacos 69_1 Alpaca 20 20
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 30 30
No Yes Mustela putorius furo 69_1.0 Domestic ferret 30 30
No Yes Ailuropoda melanoleuca 69_1 Giant panda 30 30
No Yes Canis familiaris 69_3.1 Dog 29 29
No Yes Felis catus 69 Domestic cat 19 19
No Yes Equus caballus 69_2 Horse 29 29
No Yes Myotis lucifugus 69_2.0 Little brown bat 28 28
No Yes Pteropus vampyrus 69_1 Large flying fox 27 27
No Yes Sorex araneus 69_1 European shrew 11 11
No Yes Erinaceus europaeus 69 Western European hedgehog 13 13
No Yes Procavia capensis 69_1 Cape rock hyrax 23 23
No Yes Loxodonta africana 69_3 African savanna elephant 32 32
No Yes Echinops telfairi 69 Small Madagascar hedgehog 19 19
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 14 14
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 17
No Yes Macropus eugenii 69_1.0 Tammar wallaby 22 22
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 30 30
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 27 27
No Yes Ornithorhynchus anatinus 69_5 Platypus 16 16
No Yes Petromyzon marinus 69_7.0 Sea lamprey 14 14
No Yes Meleagris gallopavo 69_2 Turkey 28 28
No Yes Gallus gallus 69_2 Chicken 28 28
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 26 26
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 27 27
No Yes Anolis carolinensis 69_2.0 Green anole 28 28
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 26 26
No Yes Latimeria chalumnae 69_1 Coelacanth 32 32
No Yes Gadus morhua 69_1 Atlantic cod 26 26
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 36 36
No Yes Takifugu rubripes 69_4 Torafugu 30 30
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 32 32
No Yes Oryzias latipes 69_1 Japanese medaka 30 30
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 40 40
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 37 37
No Yes Danio rerio 69_9 Zebrafish 41 41
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 6
No Yes Ciona intestinalis 69 Vase tunicate 6 6
No Yes Drosophila melanogaster 69_5 Fruit fly 8 8
No Yes Caenorhabditis elegans 69_215 Roundworm 2 2
No Yes NCBI 2017_08 genome   14758 14754
No Yes STRING v9.0.5 (STRING)   901 901
No Yes Uniprot 2018_03 genome   7179 7177
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   16 16
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   23 23
No Yes TargetDB (Targets)   35 35
No Yes UniProt viral sequences (Viral)   2 2

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