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  Home > Genomes > Equus caballus 69_2 > RING/U-box domains


RING/U-box superfamily domain assignments
in
Equus caballus 69_2

Assignment details

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Equus caballus 69_2 has 319 significant domains in 284 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSECAP00000000010   8.72e-19   75-134   RING finger domain, C3HC4  
ENSECAP00000000025   0.0000000000000165   8-73   Variant RING domain  
ENSECAP00000000239   4.86e-21   75-126   RING finger domain, C3HC4  
ENSECAP00000000301   7.65e-17   169-275   Zf-UBP  
ENSECAP00000000424   0.0000196   2-50   RING finger domain, C3HC4  
ENSECAP00000000562   0.0000000795   333-387   RING finger domain, C3HC4  
ENSECAP00000000584   1.06e-16   1140-1194   RING finger domain, C3HC4  
ENSECAP00000000714   0.000000000000683   658-720   Variant RING domain  
ENSECAP00000000770   0.000000000265   1-37   RING finger domain, C3HC4  
ENSECAP00000000934   0.000000000000872   72-137   RING finger domain, C3HC4  
ENSECAP00000001034   8.71e-21   22-135   Zf-UBP  
ENSECAP00000001083   0.000000000167   28-80   RING finger domain, C3HC4  
ENSECAP00000001121   4.12e-23   1089-1185   Zf-UBP  
ENSECAP00000001449   0.00000000000287   129-179   RING finger domain, C3HC4  
ENSECAP00000001453   3.04e-24   389-473   U-box  
ENSECAP00000001549   0.000000000000801   18-111   RING finger domain, C3HC4  
ENSECAP00000001705   0.000000000157   14-71   RING finger domain, C3HC4  
ENSECAP00000001733   1.35e-21   5-78   RING finger domain, C3HC4  
ENSECAP00000001770   0.0000000631   22-76   RING finger domain, C3HC4  
ENSECAP00000001818   3.53e-21   5-78   RING finger domain, C3HC4  
ENSECAP00000001874   4.01e-20   255-306   RING finger domain, C3HC4  
ENSECAP00000001904   1.01e-19   248-301   RING finger domain, C3HC4  
ENSECAP00000002021   8.48e-16   27-110   RING finger domain, C3HC4  
  0.00000000000124   189-228   RING finger domain, C3HC4  
  0.0000000283   103-169   IBR domain  
ENSECAP00000002075   2.78e-16   19-75   Variant RING domain  
ENSECAP00000002144   3.06e-36   2-69   RING finger domain, C3HC4  
ENSECAP00000002145   0.00000000000000276   13-71   RING finger domain, C3HC4  
ENSECAP00000002187   0.00000000000000287   6-56   RING finger domain, C3HC4  
ENSECAP00000002441   4.71e-20   8-84   RING finger domain, C3HC4  
ENSECAP00000002446   8.24e-20   215-301   RING finger domain, C3HC4  
  0.0000000000000706   290-356   RING finger domain, C3HC4  
  0.0000000000000918   390-448   RING finger domain, C3HC4  
ENSECAP00000002685   0.0000000000265   261-311   RING finger domain, C3HC4  
ENSECAP00000002839   4e-22   35-129   Zf-UBP  
ENSECAP00000003143   0.0000000000000042   29-83   RING finger domain, C3HC4  
ENSECAP00000003148   0.0000000000645   261-303   RING finger domain, C3HC4  
ENSECAP00000003427   7.51e-43   292-370   RING finger domain, C3HC4  
ENSECAP00000003451   3.53e-18   286-351   RING finger domain, C3HC4  
ENSECAP00000003650   0.000000000000489   8-66   RING finger domain, C3HC4  
ENSECAP00000003666   0.00000000217   505-558   RING finger domain, C3HC4  
ENSECAP00000004176   7.61e-24   485-558   Variant RING domain  
ENSECAP00000004282   0.00000106   52-94   RING finger domain, C3HC4  
ENSECAP00000004285   0.00000000578   366-428   RING finger domain, C3HC4  
ENSECAP00000004316   0.000000000000778   7-71   RING finger domain, C3HC4  
ENSECAP00000004320   2.14e-27   5-94   RING finger domain, C3HC4  
  8.39e-25   340-421   RING finger domain, C3HC4  
ENSECAP00000004375   6.36e-33   132-239   Zf-UBP  
ENSECAP00000004712   1.51e-23   9-82   RING finger domain, C3HC4  
ENSECAP00000004743   2.16e-21   3-90   RING finger domain, C3HC4  
ENSECAP00000004974   5.42e-19   194-265   ZZ domain  
ENSECAP00000005109   0.00000000000017   12-62   RING finger domain, C3HC4  
ENSECAP00000005141   0.0000000942   268-331   RING finger domain, C3HC4  
ENSECAP00000005167   0.0000000000137   184-232   RING finger domain, C3HC4  
ENSECAP00000005257   8.12e-20   200-278   ZZ domain  
  0.0000000000000682   321-382   RING finger domain, C3HC4  
  0.00000012   127-194   RING finger domain, C3HC4  
ENSECAP00000005276   0.00000000303   316-362   RING finger domain, C3HC4  
ENSECAP00000005385   0.000000000000053   159-214   Variant RING domain  
ENSECAP00000005402   0.000000000198   830-870   RING finger domain, C3HC4  
ENSECAP00000005414   0.0000000000353   38-111   RING finger domain, C3HC4  
ENSECAP00000005445   0.0000000141   1432-1485   RING finger domain, C3HC4  
ENSECAP00000005449   1.82e-20   171-234   RING finger domain, C3HC4  
ENSECAP00000005459   0.0000486   1194-1249   RING finger domain, C3HC4  
ENSECAP00000005537   0.00000000462   3-40,119-154   RING finger domain, C3HC4  
ENSECAP00000005612   0.0000000000000053   67-120   Variant RING domain  
ENSECAP00000005686   0.000000000000106   6-52   RING finger domain, C3HC4  
  0.0000586   180-212   IBR domain  
ENSECAP00000005740   2.65e-18   3-90   RING finger domain, C3HC4  
ENSECAP00000005761   0.000000000000283   206-263   ZZ domain  
ENSECAP00000005809   0.00000000000027   14-68   RING finger domain, C3HC4  
ENSECAP00000005876   0.0000000000000185   3-55   U-box  
ENSECAP00000005896   1.77e-26   280-381   Zf-UBP  
  0.0000000000682   263-308   RING finger domain, C3HC4  
ENSECAP00000006038   8.11e-17   149-195   RING finger domain, C3HC4  
ENSECAP00000006040   4.12e-16   127-207   RING finger domain, C3HC4  
  0.000000000000578   294-349   RING finger domain, C3HC4  
  0.00000000000155   198-267   IBR domain  
ENSECAP00000006120   9.36e-18   29-96   RING finger domain, C3HC4  
ENSECAP00000006207   4.82e-20   169-272   RING finger domain, C3HC4  
ENSECAP00000006279   1.28e-19   58-136   RING finger domain, C3HC4  
ENSECAP00000006399   4.2e-22   6-83   RING finger domain, C3HC4  
ENSECAP00000006521   0.0000116   1-35   RING finger domain, C3HC4  
ENSECAP00000006552   0.00000000981   238-280   RING finger domain, C3HC4  
ENSECAP00000006815   1.06e-18   1275-1354   U-box  
ENSECAP00000006879   4.2e-18   528-595   RING finger domain, C3HC4  
ENSECAP00000006898   2.29e-19   4-87   RING finger domain, C3HC4  
ENSECAP00000006910   0.000000471   143-219   RING finger domain, C3HC4  
ENSECAP00000006943   3.77e-18   7-81   RING finger domain, C3HC4  
ENSECAP00000007050   1.19e-23   174-240   RING finger domain, C3HC4  
ENSECAP00000007090   0.000000000471   134-208   RING finger domain, C3HC4  
ENSECAP00000007100   0.00000000000589   66-109   RING finger domain, C3HC4  
ENSECAP00000007122   1.53e-22   9-92   Zf-UBP  
ENSECAP00000007209   0.0000000000000236   14-76   RING finger domain, C3HC4  
ENSECAP00000007221   0.00000000000000141   21-126   Zf-UBP  
ENSECAP00000007247   4.18e-20   360-426   RING finger domain, C3HC4  
ENSECAP00000007399   0.0000000000259   25-74   RING finger domain, C3HC4  
ENSECAP00000007535   0.000000000000259   103-150   RING finger domain, C3HC4  
ENSECAP00000007643   0.000000000000278   7-75   RING finger domain, C3HC4  
ENSECAP00000007650   6.09e-16   16-100   RING finger domain, C3HC4  
  0.00000000000006   174-220   RING finger domain, C3HC4  
  0.0000000104   92-158   IBR domain  
ENSECAP00000007668   5.2e-18   521-589   RING finger domain, C3HC4  
ENSECAP00000007710   0.00000000000000124   228-282   RING finger domain, C3HC4  
ENSECAP00000007916   0.0000000000033   1664-1710   ZZ domain  
ENSECAP00000008093   2.71e-27   3-96   Zf-UBP  
ENSECAP00000008200   0.000000000000108   6-72   RING finger domain, C3HC4  
ENSECAP00000008265   0.000000788   24-57   RING finger domain, C3HC4  
ENSECAP00000008283   6.01e-20   393-497   RING finger domain, C3HC4  
ENSECAP00000008334   0.0000000283   655-702   RING finger domain, C3HC4  
ENSECAP00000008448   0.000000000803   27-78   U-box  
  0.0000132   221-274   U-box  
ENSECAP00000008480   0.000000000000212   146-204   RING finger domain, C3HC4  
  0.00000000742   80-144   IBR domain  
  0.00000283   3-74   RING finger domain, C3HC4  
ENSECAP00000008507   3.53e-20   330-412   RING finger domain, C3HC4  
  0.00000000000000212   512-561   RING finger domain, C3HC4  
  0.000000166   404-486   RING finger domain, C3HC4  
ENSECAP00000008582   0.0000000000000134   216-287   RING finger domain, C3HC4  
ENSECAP00000008782   0.0000000000000159   16-88   RING finger domain, C3HC4  
ENSECAP00000008825   1.27e-17   356-413   RING finger domain, C3HC4  
ENSECAP00000008933   0.0000131   107-155   RING finger domain, C3HC4  
ENSECAP00000009005   2.42e-18   287-343   RING finger domain, C3HC4  
  0.0000000000000122   134-220   RING finger domain, C3HC4  
  0.00000000148   206-275   IBR domain  
ENSECAP00000009027   0.00000000867   1715-1766   RING finger domain, C3HC4  
ENSECAP00000009113   0.000000000042   930-991   RING finger domain, C3HC4  
ENSECAP00000009126   0.00000000000141   249-299   RING finger domain, C3HC4  
ENSECAP00000009181   4.2e-18   3-85   RING finger domain, C3HC4  
ENSECAP00000009229   0.0000000000162   17-64   RING finger domain, C3HC4  
ENSECAP00000009339   7.78e-21   26-83   RING finger domain, C3HC4  
ENSECAP00000009349   0.0000000000000155   27-95   RING finger domain, C3HC4  
ENSECAP00000009350   7.65e-16   817-880   ZZ domain  
ENSECAP00000009469   0.000000000000196   424-481   RING finger domain, C3HC4  
ENSECAP00000009563   4.24e-21   192-244   RING finger domain, C3HC4  
ENSECAP00000009695   1.91e-21   7-97   RING finger domain, C3HC4  
ENSECAP00000010044   5.47e-28   977-1061   U-box  
ENSECAP00000010057   0.00000000000000101   2-88   RING finger domain, C3HC4  
  0.0023   106-161   ZZ domain  
ENSECAP00000010109   0.00000000000265   70-124   RING finger domain, C3HC4  
  0.000118   9-43   RING finger domain, C3HC4  
ENSECAP00000010144   0.00000000000000465   2233-2286   RING finger domain, C3HC4  
  0.00000000000848   2074-2159   RING finger domain, C3HC4  
  0.00388   2146-2214   IBR domain  
ENSECAP00000010426   1.43e-16   118-181   RING finger domain, C3HC4  
ENSECAP00000010488   0.000000023   4463-4538   RING finger domain, C3HC4  
ENSECAP00000010559   0.00000777   23-74   U-box  
ENSECAP00000010692   0.0000636   1-44   RING finger domain, C3HC4  
ENSECAP00000010795   0.000000133   447-496   RING finger domain, C3HC4  
ENSECAP00000010858   0.000000000000401   224-273   RING finger domain, C3HC4  
ENSECAP00000010972   0.0000000000111   82-140   RING finger domain, C3HC4  
ENSECAP00000011088   0.00000000141   598-659   IBR domain  
  0.00000000777   668-722   RING finger domain, C3HC4  
  0.0000141   515-594   RING finger domain, C3HC4  
ENSECAP00000011150   0.000000000198   26-74   RING finger domain, C3HC4  
ENSECAP00000011176   0.00000000139   520-569   RING finger domain, C3HC4  
ENSECAP00000011368   1.75e-19   606-673   RING finger domain, C3HC4  
ENSECAP00000011405   0.00000000000000906   1-62   RING finger domain, C3HC4  
ENSECAP00000011468   0.00000000000103   30-81   RING finger domain, C3HC4  
ENSECAP00000011580   0.000000000000381   682-741   RING finger domain, C3HC4  
ENSECAP00000011584   1.63e-17   33-105   RING finger domain, C3HC4  
ENSECAP00000011589   1.16e-29   13-104   RING finger domain, C3HC4  
  8.39e-20   350-441   RING finger domain, C3HC4  
ENSECAP00000011654   0.00000121   517-568   RING finger domain, C3HC4  
ENSECAP00000011666   0.00000212   443-491   RING finger domain, C3HC4  
ENSECAP00000011673   0.000000436   312-371   U-box  
ENSECAP00000011696   0.000000000000707   8-77   RING finger domain, C3HC4  
ENSECAP00000011833   0.00000000972   43-98   RING finger domain, C3HC4  
ENSECAP00000012001   0.000000000000125   703-766   RING finger domain, C3HC4  
ENSECAP00000012056   0.000000000000159   780-847   IBR domain  
  0.0000000494   697-762   RING finger domain, C3HC4  
  0.0000073   860-932   RING finger domain, C3HC4  
ENSECAP00000012139   1.04e-42   349-426   RING finger domain, C3HC4  
ENSECAP00000012226   0.00000000000033   17-111   RING finger domain, C3HC4  
ENSECAP00000012266   3.09e-18   241-318   RING finger domain, C3HC4  
ENSECAP00000012268   1.32e-24   167-246   U-box  
ENSECAP00000012324   9.72e-19   8-79   RING finger domain, C3HC4  
ENSECAP00000012468   0.00000000146   1-31   RING finger domain, C3HC4  
ENSECAP00000012533   6.83e-18   35-108   RING finger domain, C3HC4  
ENSECAP00000012583   1.77e-18   9-79   RING finger domain, C3HC4  
ENSECAP00000012609   0.00000000000000561   273-334   RING finger domain, C3HC4  
ENSECAP00000012620   0.00000000000000848   62-117   Variant RING domain  
ENSECAP00000012648   0.000000000245   6-70   RING finger domain, C3HC4  
ENSECAP00000012739   1.77e-34   174-281   Zf-UBP  
ENSECAP00000012797   1.05e-20   66-146   ZZ domain  
ENSECAP00000012967   2.29e-20   92-138   RING finger domain, C3HC4  
ENSECAP00000012996   1.36e-20   272-332   RING finger domain, C3HC4  
ENSECAP00000013030   0.000000000109   303-355   RING finger domain, C3HC4  
ENSECAP00000013124   1.2e-16   155-216   RING finger domain, C3HC4  
ENSECAP00000013139   0.000000187   301-346   RING finger domain, C3HC4  
ENSECAP00000013168   0.000000546   315-360   RING finger domain, C3HC4  
ENSECAP00000013318   1.29e-19   219-300   ZZ domain  
ENSECAP00000013378   9.66e-25   4-91   RING finger domain, C3HC4  
ENSECAP00000013392   1.73e-16   24-80   RING finger domain, C3HC4  
ENSECAP00000013539   0.0000000000000341   544-608   Variant RING domain  
ENSECAP00000013767   0.000000000121   320-383   RING finger domain, C3HC4  
ENSECAP00000013780   0.000000000000113   6-56   RING finger domain, C3HC4  
ENSECAP00000013804   0.000000000000906   10-79   RING finger domain, C3HC4  
ENSECAP00000013883   0.0000000000299   113-160   RING finger domain, C3HC4  
ENSECAP00000014065   5.55e-20   360-426   RING finger domain, C3HC4  
ENSECAP00000014157   0.000000000000143   3610-3655   RING finger domain, C3HC4  
ENSECAP00000014247   3.09e-26   4-90   RING finger domain, C3HC4  
ENSECAP00000014437   2.36e-18   7-79   RING finger domain, C3HC4  
ENSECAP00000014518   3.89e-20   273-328   RING finger domain, C3HC4  
ENSECAP00000014551   8.84e-16   29-95   RING finger domain, C3HC4  
ENSECAP00000014642   0.00000000265   269-340   RING finger domain, C3HC4  
ENSECAP00000014651   4.12e-21   6-80   RING finger domain, C3HC4  
ENSECAP00000014854   0.0000000000000101   3-87   Zf-UBP  
ENSECAP00000014873   0.00000000000000942   133-183   RING finger domain, C3HC4  
ENSECAP00000014966   0.000000000000508   42-95   RING finger domain, C3HC4  
ENSECAP00000015041   4.42e-18   61-125   RING finger domain, C3HC4  
ENSECAP00000015278   0.0000000000000552   282-347   RING finger domain, C3HC4  
ENSECAP00000015339   3.53e-38   1-101   RING finger domain, C3HC4  
ENSECAP00000015347   2.09e-17   271-318   RING finger domain, C3HC4  
ENSECAP00000015567   0.00000000000000552   384-441   RING finger domain, C3HC4  
ENSECAP00000015649   0.00000000000019   212-280   RING finger domain, C3HC4  
ENSECAP00000015664   0.0000000000565   1814-1874   ZZ domain  
  0.000000000695   1772-1823   ZZ domain  
ENSECAP00000015683   3.74e-39   324-402   RING finger domain, C3HC4  
ENSECAP00000015696   0.0000000053   26-64,112-147   RING finger domain, C3HC4  
  0.0297   149-199   ZZ domain  
ENSECAP00000015722   0.00000424   36-87   RING finger domain, C3HC4  
ENSECAP00000015781   0.000000000161   3-76   RING finger domain, C3HC4  
ENSECAP00000015838   0.00000359   670-720   RING finger domain, C3HC4  
ENSECAP00000015905   0.0000141   671-721   RING finger domain, C3HC4  
ENSECAP00000015986   0.0000000000122   417-470   RING finger domain, C3HC4  
  0.0000000000442   338-403   IBR domain  
  0.00000000106   263-341   RING finger domain, C3HC4  
ENSECAP00000016051   8.39e-17   34-105   RING finger domain, C3HC4  
ENSECAP00000016132   0.0000137   2-45   RING finger domain, C3HC4  
ENSECAP00000016141   0.00000000000000159   16-91   RING finger domain, C3HC4  
ENSECAP00000016143   1.13e-18   391-490   RING finger domain, C3HC4  
ENSECAP00000016248   0.0000000000994   907-967   RING finger domain, C3HC4  
ENSECAP00000016270   9.42e-27   3-96   Zf-UBP  
ENSECAP00000016287   3.06e-24   24-108   Zf-UBP  
ENSECAP00000016641   0.000000000376   82-115   RING finger domain, C3HC4  
ENSECAP00000016966   0.00000000000000508   43-93   RING finger domain, C3HC4  
ENSECAP00000016996   0.000000000000795   14-69   RING finger domain, C3HC4  
ENSECAP00000017040   1.81e-16   10-84   RING finger domain, C3HC4  
ENSECAP00000017194   7.24e-21   224-282   RING finger domain, C3HC4  
  8.08e-17   70-153   RING finger domain, C3HC4  
  0.00000000166   145-212   IBR domain  
ENSECAP00000017238   8.24e-18   584-670   ZZ domain  
ENSECAP00000017461   0.000000025   331-386   RING finger domain, C3HC4  
ENSECAP00000017531   0.00000000000000103   2-88   RING finger domain, C3HC4  
  0.000636   108-161   ZZ domain  
ENSECAP00000017539   0.000000000000641   16-73   RING finger domain, C3HC4  
ENSECAP00000017599   0.00000971   624-678   RING finger domain, C3HC4  
ENSECAP00000017620   0.00002   385-434   RING finger domain, C3HC4  
ENSECAP00000017879   0.0000000000066   35-80   RING finger domain, C3HC4  
ENSECAP00000017971   2.12e-18   4-75   RING finger domain, C3HC4  
ENSECAP00000018004   0.0000000000848   6-78   RING finger domain, C3HC4  
ENSECAP00000018060   2.05e-20   561-608   RING finger domain, C3HC4  
ENSECAP00000018130   0.00000000000353   33-90   RING finger domain, C3HC4  
ENSECAP00000018206   0.0000000000000574   1946-1992   RING finger domain, C3HC4  
ENSECAP00000018258   0.0000000000000042   35-109   RING finger domain, C3HC4  
ENSECAP00000018392   5.65e-21   3018-3106   ZZ domain  
ENSECAP00000018415   1.84e-19   231-282   RING finger domain, C3HC4  
ENSECAP00000018502   2.12e-17   50-111   ZZ domain  
ENSECAP00000018618   0.000000000000858   63-110   RING finger domain, C3HC4  
ENSECAP00000018812   0.000000000412   8-58   RING finger domain, C3HC4  
ENSECAP00000018855   0.0000000131   345-411   RING finger domain, C3HC4  
ENSECAP00000018941   8.24e-21   219-297   ZZ domain  
ENSECAP00000018980   2.12e-20   269-322   RING finger domain, C3HC4  
ENSECAP00000018985   3.81e-40   20-105   RING finger domain, C3HC4  
ENSECAP00000019025   0.0000000389   27-102   RING finger domain, C3HC4  
ENSECAP00000019052   2.39e-20   213-278   RING finger domain, C3HC4  
ENSECAP00000019140   0.00000000121   419-467   RING finger domain, C3HC4  
ENSECAP00000019207   2.21e-18   7-79   RING finger domain, C3HC4  
ENSECAP00000019318   5.08e-18   4-81   RING finger domain, C3HC4  
ENSECAP00000019363   1.46e-26   267-351   RING finger domain, C3HC4  
ENSECAP00000019479   0.00000000000073   4-68   Zf-UBP  
ENSECAP00000019634   2.94e-22   169-257   ZZ domain  
ENSECAP00000019668   7.54e-19   516-561   RING finger domain, C3HC4  
ENSECAP00000019702   3.09e-17   13-85   RING finger domain, C3HC4  
ENSECAP00000019750   0.00000000099   240-291   RING finger domain, C3HC4  
ENSECAP00000019813   5.89e-17   609-670   RING finger domain, C3HC4  
ENSECAP00000019842   0.00000013   326-372   RING finger domain, C3HC4  
ENSECAP00000019874   0.000000000401   8-58   RING finger domain, C3HC4  
ENSECAP00000019957   0.0000106   152-230   RING finger domain, C3HC4  
ENSECAP00000020079   2.65e-20   271-335   RING finger domain, C3HC4  
ENSECAP00000020169   0.00000000000108   50-115   RING finger domain, C3HC4  
ENSECAP00000020532   2e-18   36-147   Zf-UBP  
ENSECAP00000020733   0.000000000429   1256-1308   RING finger domain, C3HC4  
ENSECAP00000020737   0.00000000000000172   4-78   RING finger domain, C3HC4  
ENSECAP00000020850   2.01e-20   222-289   RING finger domain, C3HC4  
ENSECAP00000020877   5.24e-25   138-213   Variant RING domain  
ENSECAP00000021004   0.000000000000707   5-62   RING finger domain, C3HC4  
ENSECAP00000021190   0.0000017   1252-1312   RING finger domain, C3HC4  
ENSECAP00000021201   0.0000000000167   2-62   RING finger domain, C3HC4  
ENSECAP00000021243   1.31e-19   2-61   ZZ domain  
  0.0000000412   868-928   RING finger domain, C3HC4  
  0.00212   739-783   RING finger domain, C3HC4  
  0.0148   786-831   RING finger domain, C3HC4  
ENSECAP00000021333   0.0000000000000589   43-91   RING finger domain, C3HC4  
ENSECAP00000021392   0.0000000000000137   110-176   RING finger domain, C3HC4  
  0.0000000000353   293-356   RING finger domain, C3HC4  
ENSECAP00000021554   5.41e-19   518-581   RING finger domain, C3HC4  
ENSECAP00000021646   3.74e-17   461-530   RING finger domain, C3HC4  
  0.0000000000291   150-199   RING finger domain, C3HC4  
ENSECAP00000021676   0.00000204   34-96   RING finger domain, C3HC4  
ENSECAP00000021757   0.00000000000133   240-290   RING finger domain, C3HC4  
ENSECAP00000021847   0.0000000000000229   748-808   RING finger domain, C3HC4  
ENSECAP00000021893   9.72e-20   8-78   RING finger domain, C3HC4  
ENSECAP00000021924   8.62e-20   8-87   RING finger domain, C3HC4  
ENSECAP00000021925   0.000000000117   227-296   RING finger domain, C3HC4  
ENSECAP00000021979   0.0000000000000872   8-70   RING finger domain, C3HC4  
ENSECAP00000021999   0.000000000000278   14-109   RING finger domain, C3HC4  
ENSECAP00000022149   5.96e-18   940-988   RING finger domain, C3HC4  
ENSECAP00000022250   5.65e-18   246-338   U-box  
  0.000000377   481-533   RING finger domain, C3HC4  
ENSECAP00000022383   1.88e-16   1-58   ZZ domain  
ENSECAP00000022419   0.00000000000294   1675-1722   ZZ domain  
ENSECAP00000022429   1.68e-18   131-183   RING finger domain, C3HC4  
ENSECAP00000022495   0.00000000152   21-67   RING finger domain, C3HC4  
ENSECAP00000022529   1.53e-19   93-139   RING finger domain, C3HC4  
ENSECAP00000022605   5.66e-18   34-92   RING finger domain, C3HC4  
ENSECAP00000022606   0.00000000000000953   60-114   Variant RING domain  
ENSECAP00000022700   0.000000759   16-64   ZZ domain  
ENSECAP00000022709   0.00000000000000162   11-66   Variant RING domain  
ENSECAP00000022724   0.00000218   26-92   RING finger domain, C3HC4  
ENSECAP00000022886   0.0000000000000777   2-54   Variant RING domain  
ENSECAP00000022999   4.82e-33   2-83   RING finger domain, C3HC4  
ENSECAP00000023004   3.76e-23   146-211   RING finger domain, C3HC4  
ENSECAP00000023035   2.21e-24   694-770   Variant RING domain  
ENSECAP00000023088   0.0000000000000919   156-242   RING finger domain, C3HC4  
 
Weak hits:
ENSECAP00000000333   0.0226   61-105   RING finger domain, C3HC4  
ENSECAP00000003071   0.0494   335-400   RING finger domain, C3HC4  
ENSECAP00000003083   0.00191   376-403   RING finger domain, C3HC4  
ENSECAP00000003130   0.073   227-285   RING finger domain, C3HC4  
ENSECAP00000004112   0.000848   437-483   RING finger domain, C3HC4  
ENSECAP00000005035   0.00126   389-442   RING finger domain, C3HC4  
ENSECAP00000005405   0.00225   1-39   RING finger domain, C3HC4  
ENSECAP00000005704   0.0397   798-842   RING finger domain, C3HC4  
ENSECAP00000005922   0.00494   661-693   RING finger domain, C3HC4  
ENSECAP00000008626   0.000265   646-702   RING finger domain, C3HC4  
ENSECAP00000009446   0.00388   333-388   IBR domain  
ENSECAP00000010072   0.00765   53-93   RING finger domain, C3HC4  
ENSECAP00000010138   0.0444   7-35   RING finger domain, C3HC4  
ENSECAP00000010713   0.00283   1021-1078   RING finger domain, C3HC4  
ENSECAP00000010951   0.000918   1733-1792   ZZ domain  
ENSECAP00000012514   0.0418   350-392   RING finger domain, C3HC4  
ENSECAP00000012873   0.00131   219-274   RING finger domain, C3HC4  
ENSECAP00000013473   0.000164   13-44   RING finger domain, C3HC4  
ENSECAP00000014132   0.000106   846-882   RING finger domain, C3HC4  
ENSECAP00000015371   0.000102   7-39   RING finger domain, C3HC4  
ENSECAP00000015474   0.000177   79-139   RING finger domain, C3HC4  
ENSECAP00000015617   0.00432   122-147   RING finger domain, C3HC4  
ENSECAP00000016564   0.00182   323-390   RING finger domain, C3HC4  
ENSECAP00000016793   0.00883   158-211   RING finger domain, C3HC4  
ENSECAP00000017000   0.00648   647-691   RING finger domain, C3HC4  
ENSECAP00000017256   0.00113   15-90   RING finger domain, C3HC4  
ENSECAP00000017982   0.0618   596-636   RING finger domain, C3HC4  
ENSECAP00000018667   0.00706   33-67   RING finger domain, C3HC4  
ENSECAP00000019212   0.0146   298-340   RING finger domain, C3HC4  
ENSECAP00000019237   0.000918   737-807   RING finger domain, C3HC4  
ENSECAP00000022438   0.00291   598-664   RING finger domain, C3HC4  
ENSECAP00000023006   0.000138   2-45   RING finger domain, C3HC4  

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Select to display   Genome       Domains   Proteins
No Yes ALL   868558 868558
No Yes Homo sapiens 76_38 Human 1389 1295
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 357 321
No Yes Gorilla gorilla 76_3.1 Western gorilla 461 422
No Yes Pongo abelii 76_2 Sumatran orangutan 360 325
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 371 326
No Yes Papio anubis 76 Olive baboon 380 343
No Yes Macaca mulatta 76_1 Rhesus monkey 609 555
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 709 647
No Yes Otolemur garnettii 76_3 Small-eared galago 366 330
No Yes Microcebus murinus 76_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 76_5.0 Norway rat 361 329
No Yes Mus musculus 76_38 House mouse 820 752
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 332 305
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 326 285
No Yes Cavia porcellus 76_3 Domestic guinea pig 324 292
No Yes Oryctolagus cuniculus 76_2 Rabbit 355 319
No Yes Ochotona princeps 76 American pika 258 237
No Yes Tupaia belangeri 76 Northern tree shrew 206 189
No Yes Sus scrofa 76_10.2 Pig 412 369
No Yes Bos taurus 76_3.1 Cattle 362 326
No Yes Ovis aries 76_3.1 Sheep 362 326
No Yes Vicugna pacos 76_1 Alpaca 185 165
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 76_1.0 Domestic ferret 323 290
No Yes Ailuropoda melanoleuca 76_1 Giant panda 361 322
No Yes Canis familiaris 76_3.1 Dog 415 372
No Yes Felis catus 76_6.2 Domestic cat 327 296
No Yes Equus caballus 76_2 Horse 343 307
No Yes Myotis lucifugus 76_2.0 Little brown bat 353 319
No Yes Pteropus vampyrus 76_1 Large flying fox 299 265
No Yes Sorex araneus 76_1 European shrew 213 190
No Yes Erinaceus europaeus 76 Western European hedgehog 214 202
No Yes Procavia capensis 76_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 76_3 African savanna elephant 436 400
No Yes Echinops telfairi 76 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 444 388
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 76_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 392 351
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 399 360
No Yes Ornithorhynchus anatinus 76_5 Platypus 259 238
No Yes Saccoglossus kowalevskii v3.0   558 512
No Yes Petromyzon marinus 76_7.0 Sea lamprey 170 155
No Yes Meleagris gallopavo 76_2 Turkey 262 238
No Yes Gallus gallus 76_4 Chicken 298 266
No Yes Anas platyrhynchos 76_1.0 Mallard 253 229
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 228
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 270 241
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 378 353
No Yes Anolis carolinensis 76_2.0 Green anole 326 288
No Yes Xenopus laevis African clawed frog 652 593
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 472 415
No Yes Latimeria chalumnae 76_1 Coelacanth 484 444
No Yes Lepisosteus oculatus 76 Spotted gar 469 417
No Yes Gadus morhua 76_1 Atlantic cod 401 361
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 400 354
No Yes Takifugu rubripes 76_4 Torafugu 1021 919
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 550 498
No Yes Oryzias latipes 76_1 Japanese medaka 461 402
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 389 342
No Yes Poecilia formosa 76 Amazon molly 507 449
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 621 568
No Yes Astyanax mexicanus 76 Mexican tetra 441 397
No Yes Danio rerio 76_9 Zebrafish 794 717
No Yes Oikopleura dioica   194 182
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 201 177
No Yes Ciona intestinalis 76 Vase tunicate 161 141
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 610 569
No Yes Adineta vaga   821 650
No Yes Octopus bimaculoides 280   315 276
No Yes Crassostrea gigas 22 Pacific oyster 352 314
No Yes Lottia gigantea Owl limpet 333 288
No Yes Helobdella robusta   326 302
No Yes Capitella sp. I   265 240
No Yes Danaus plexippus OGS1.0 Monarch butterfly 138 125
No Yes Heliconius melpomene Postman butterfly 118 110
No Yes Bombyx mori Domestic silkworm 89 83
No Yes Nasonia vitripennis Jewel wasp 144 120
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 194 178
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 158 142
No Yes Linepithema humile v1.1 Argentine ant 162 141
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 158 139
No Yes Solenopsis invicta v.2.2.3 Red fire ant 146 130
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 161 141
No Yes Atta cephalotes v1.1   151 133
No Yes Camponotus floridanus v3.3 Florida carpenter ant 165 146
No Yes Lucilia cuprina Australian sheep blowfly 130 120
No Yes Drosophila grimshawi 1.3   162 144
No Yes Drosophila willistoni 1.3   160 143
No Yes Drosophila pseudoobscura 2.13   193 174
No Yes Drosophila persimilis 1.3   179 167
No Yes Drosophila suzukii   170 149
No Yes Drosophila yakuba 1.3   163 149
No Yes Drosophila simulans 1.3   135 124
No Yes Drosophila sechellia 1.3   159 145
No Yes Drosophila melanogaster 76_5 Fruit fly 360 318
No Yes Drosophila erecta 1.3   162 148
No Yes Drosophila ananassae 1.3   170 154
No Yes Drosophila virilis 1.2   163 148
No Yes Drosophila mojavensis 1.3   161 145
No Yes Megaselia scalaris 22   53 47
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 195 162
No Yes Culex pipiens quinquefasciatus Southern house mosquito 217 170
No Yes Anopheles darlingi 22 American malaria mosquito 100 91
No Yes Anopheles gambiae 49_3j African malaria mosquito 144 128
No Yes Tribolium castaneum 3.0 Red flour beetle 174 155
No Yes Pediculus humanus corporis (Early assembly) Human body louse 158 137
No Yes Acyrthosiphon pisum Pea aphid 130 115
No Yes Rhodnius prolixus 22   130 117
No Yes Daphnia pulex Common water flea 249 224
No Yes Strigamia maritima 22   216 188
No Yes Sarcoptes scabiei   86 78
No Yes Tetranychus urticae Two-spotted spider mite 142 125
No Yes Ixodes scapularis (Preliminary) Black-legged tick 175 158
No Yes Pristionchus pacificus   303 254
No Yes Meloidogyne incognita Southern root-knot nematode 262 226
No Yes Meloidogyne hapla   122 105
No Yes Onchocerca volvulus 22   132 117
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 158 136
No Yes Caenorhabditis japonica   138 123
No Yes Caenorhabditis brenneri   498 407
No Yes Caenorhabditis remanei   409 356
No Yes Caenorhabditis elegans 76_235 Roundworm 323 263
No Yes Caenorhabditis briggsae 2   236 208
No Yes Trichinella spiralis 22   77 69
No Yes Hymenolepis microstoma   120 105
No Yes Echinococcus multilocularis   124 110
No Yes Echinococcus granulosus   116 103
No Yes Taenia solium Pork tapeworm 124 113
No Yes Schistosoma mansoni   132 118
No Yes Mnemiopsis leidyi Sea walnut 120 113
No Yes Thelohanellus kitauei   33 29
No Yes Acropora digitifera v1.0   286 253
No Yes Nematostella vectensis 1.0 Starlet sea anemone 328 294
No Yes Hydra vulgaris   167 155
No Yes Amphimedon queenslandica   688 645
No Yes Trichoplax adhaerens   114 99
No Yes Proterospongia sp. ATCC 50818   124 113
No Yes Monosiga brevicollis   110 100
No Yes Sphaeroforma arctica JP610   106 104
No Yes Capsaspora owczarzaki ATCC 30864   134 126
No Yes Conidiobolus coronatus NRRL28638 v1.0   67 61
No Yes Mortierella verticillata NRRL 6337   128 113
No Yes Phycomyces blakesleeanus   109 96
No Yes Rhizopus oryzae RA 99-880   84 74
No Yes Mucor circinelloides   119 103
No Yes Rhizomucor miehei CAU432   96 84
No Yes Malassezia globosa CBS 7966   68 64
No Yes Sporisorium reilianum 22   65 58
No Yes Ustilago maydis   63 56
No Yes Mixia osmundae IAM 14324 v1.0   69 58
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   96 84
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   179 163
No Yes Melampsora laricis-populina   96 87
No Yes Rhodotorula graminis WP1 v1.0   73 63
No Yes Sporobolomyces roseus IAM 13481   50 41
No Yes Microbotryum violaceum 22   84 67
No Yes Wallemia sebi v1.0   51 42
No Yes Sphaerobolus stellatus v1.0   160 123
No Yes Piloderma croceum F 1598 v1.0   166 129
No Yes Serpula lacrymans var. lacrymans S7.9   90 75
No Yes Coniophora puteana   102 82
No Yes Hydnomerulius pinastri v2.0   117 95
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   120 98
No Yes Pisolithus microcarpus 441 v1.0   122 99
No Yes Pisolithus tinctorius Marx 270 v1.0   131 105
No Yes Scleroderma citrinum Foug A v1.0   111 91
No Yes Coprinopsis cinerea okayama7 130 v3   101 84
No Yes Pleurotus ostreatus Oyster mushroom 111 91
No Yes Amanita thiersii Skay4041 v1.0   100 84
No Yes Amanita muscaria Koide v1.0 Fly agaric 133 103
No Yes Galerina marginata v1.0   153 120
No Yes Hebeloma cylindrosporum h7 v2.0   118 94
No Yes Laccaria bicolor S238N-H82   140 107
No Yes Agaricus bisporus var. bisporus   91 71
No Yes Schizophyllum commune   135 106
No Yes Stereum hirsutum FP-91666 SS1 v1.0   112 91
No Yes Heterobasidion annosum   99 78
No Yes Gloeophyllum trabeumv1.0   102 83
No Yes Punctularia strigosozonata v1.0   114 92
No Yes Sebacina vermifera MAFF 305830 v1.0   152 108
No Yes Fomitiporia mediterranea v1.0   90 75
No Yes Tulasnella calospora AL13/4D v1.0   130 107
No Yes Postia placenta   133 109
No Yes Wolfiporia cocos MD-104 SS10 v1.0   117 94
No Yes Fomitopsis pinicolav1.0   125 107
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   122 105
No Yes Phanerochaete chrysosporium RP-78 2.1   83 59
No Yes Dichomitus squalens   125 96
No Yes Trametes versicolor v1.0   136 105
No Yes Tremella mesenterica Witches' butter 66 56
No Yes Daldinia eschscholzii EC12 v1.0   100 81
No Yes Apiospora montagnei NRRL 25634 v1.0   116 98
No Yes Magnaporthe poae ATCC 64411 22   85 68
No Yes Magnaporthe grisea 70-15   83 71
No Yes Podospora anserina   94 81
No Yes Sporotrichum thermophile ATCC 42464   80 67
No Yes Thielavia terrestris NRRL 8126   83 72
No Yes Chaetomium globosum CBS 148.51   83 68
No Yes Neurospora tetrasperma   90 73
No Yes Neurospora discreta FGSC 8579   90 76
No Yes Neurospora crassa OR74A   89 76
No Yes Cryphonectria parasitica Chestnut blight fungus 86 71
No Yes Verticillium albo-atrum VaMs.102   77 66
No Yes Verticillium dahliae VdLs.17   83 71
No Yes Acremonium alcalophilumv 1.0   75 66
No Yes Glomerella graminicola 22   104 87
No Yes Fusarium graminearum   90 80
No Yes Nectria haematococca mpVI   102 84
No Yes Fusarium oxysporum f. sp. lycopersici 4286   91 84
No Yes Fusarium verticillioides 7600   83 73
No Yes Trichoderma asperellum CBS 433.97 v1.0   96 77
No Yes Trichoderma atroviride   84 66
No Yes Trichoderma citrinoviride v1.0   88 70
No Yes Trichoderma reesei 1.2   87 70
No Yes Trichoderma virens Gv29-8   88 69
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   85 68
No Yes Trichoderma harzianum CBS 226.95 v1.0   95 77
No Yes Amorphotheca resinae v1.0 Creosote fungus 105 82
No Yes Botrytis cinerea B05.10   100 81
No Yes Sclerotinia sclerotiorum   99 81
No Yes Blumeria graminis 22   72 60
No Yes Didymella exigua CBS 183.55 v1.0   120 101
No Yes Leptosphaeria maculans 22   109 94
No Yes Setosphaeria turcica v1.0   111 91
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   106 91
No Yes Cochliobolus victoriae FI3 v1.0   106 93
No Yes Cochliobolus carbonum 26-R-13 v1.0   103 90
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 86 74
No Yes Alternaria brassicicola   95 79
No Yes Cochliobolus lunatus m118 v2.0   105 89
No Yes Pyrenophora teres f. teres 22   121 102
No Yes Pyrenophora tritici-repentis   108 92
No Yes Stagonospora nodorum   146 130
No Yes Mycosphaerella graminicola IPO323   121 101
No Yes Zasmidium cellare ATCC 36951 v1.0   147 125
No Yes Dothistroma septosporum   123 105
No Yes Septoria musiva v1.0   108 90
No Yes Mycosphaerella fijiensis CIRAD86   97 83
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   110 88
No Yes Paracoccidioides brasiliensis Pb18   69 56
No Yes Coccidioides posadasii RMSCC 3488   87 75
No Yes Coccidioides immitis RS   93 81
No Yes Ajellomyces dermatitidis SLH14081   84 74
No Yes Histoplasma capsulatum class NAmI strain WU24   74 66
No Yes Microsporum canis CBS 113480   80 73
No Yes Trichophyton equinum CBS 127.97   84 72
No Yes Trichophyton verrucosum HKI 0517   60 54
No Yes Arthroderma benhamiae CBS 112371   63 55
No Yes Trichophyton tonsurans CBS 112818   84 74
No Yes Trichophyton rubrum CBS 118892   83 73
No Yes Uncinocarpus reesii 1704   72 64
No Yes Aspergillus zonatus v1.0   87 76
No Yes Penicillium chrysogenum Wisconsin 54-1255   98 84
No Yes Penicillium chrysogenum v1.0   92 78
No Yes Aspergillus acidus v1.0   91 81
No Yes Aspergillus fumigatus Af293   83 71
No Yes Aspergillus brasiliensis v1.0   93 81
No Yes Aspergillus nidulans FGSC A4   80 72
No Yes Aspergillus sydowii v1.0   104 88
No Yes Aspergillus versicolor v1.0   100 86
No Yes Aspergillus glaucus   94 78
No Yes Aspergillus carbonarius ITEM 5010   80 69
No Yes Neosartorya fischeri NRRL 181   88 74
No Yes Aspergillus terreus NIH2624   73 60
No Yes Aspergillus tubingensis v1.0   87 76
No Yes Aspergillus wentii v1.0   99 84
No Yes Aspergillus oryzae RIB40   71 62
No Yes Aspergillus niger 22   82 72
No Yes Aspergillus niger ATCC 1015   53 49
No Yes Aspergillus flavus NRRL3357   66 59
No Yes Aspergillus clavatus NRRL 1   84 73
No Yes Penicillium marneffei ATCC 18224   97 79
No Yes Tuber melanosporum Mel28 22   77 67
No Yes Tuber melanosporum Vittad Perigord truffle 82 70
No Yes Hansenula polymorpha v2.0   48 44
No Yes Dekkera bruxellensis CBS 2499 v2.0   49 48
No Yes Pichia membranifaciensv1.0   50 47
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   54 51
No Yes Candida dubliniensis CD36   50 46
No Yes Candida tropicalis MYA-3404   54 50
No Yes Candida parapsilosis   51 47
No Yes Candida albicans SC5314   50 46
No Yes Lodderomyces elongisporus NRRL YB-4239   52 49
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   61 53
No Yes Pichia stipitis CBS 6054   51 48
No Yes Candida guilliermondii ATCC 6260   55 51
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   52 49
No Yes Debaromyces hansenii   52 48
No Yes Wickerhamomyces anomalus   63 59
No Yes Pichia pastoris GS115   56 52
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   39 38
No Yes Yarrowia lipolytica CLIB122   66 60
No Yes Candida lusitaniae ATCC 42720   55 50
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   50 45
No Yes Vanderwaltozyma polyspora DSM 70294   47 44
No Yes Candida glabrata CBS138   50 46
No Yes Kluyveromyces thermotolerans CBS 6340   54 50
No Yes Lachancea kluyveri   55 51
No Yes Kluyveromyces waltii   48 45
No Yes Ashbya gossypii ATCC 10895   46 43
No Yes Zygosaccharomyces rouxii   52 48
No Yes Saccharomyces mikatae MIT   46 43
No Yes Saccharomyces paradoxus MIT   51 47
No Yes Saccharomyces cerevisiae 76 Baker's yeast 53 50
No Yes Saccharomyces bayanus MIT   49 46
No Yes Kluyveromyces lactis   47 45
No Yes Schizosaccharomyces cryophilus OY26 22   68 59
No Yes Schizosaccharomyces octosporus yFS286   67 59
No Yes Schizosaccharomyces japonicus yFS275   61 55
No Yes Schizosaccharomyces pombe Fission yeast 68 59
No Yes Catenaria anguillulae PL171 v1.0   113 95
No Yes Allomyces macrogynus ATCC 38327   203 173
No Yes Spizellomyces punctatus DAOM BR117   97 88
No Yes Dictyostelium discoideum   195 165
No Yes Dictyostelium purpureum   278 252
No Yes Entamoeba dispar 1.2   96 76
No Yes Entamoeba invadens 1.2   107 75
No Yes Entamoeba histolytica 1   99 75
No Yes Selaginella moellendorffii   563 512
No Yes Pinus taeda Loblolly pine 528 448
No Yes Picea abies Norway spruce 366 343
No Yes Eucalyptus grandis v201 Rose gum 795 721
No Yes Theobroma cacao B97-61/B2 v1 Cacao 534 486
No Yes Gossypium raimondii v221   1648 1543
No Yes Citrus clementina v165   743 657
No Yes Citrus sinensis v154 Sweet orange 916 841
No Yes Thellungiella halophila v173   623 567
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 937 843
No Yes Capsella rubella v183   710 616
No Yes Arabidopsis lyrata Lyrate rockcress 719 630
No Yes Arabidopsis thaliana 10 Thale cress 863 771
No Yes Carica papaya Papaya 398 367
No Yes Medicago truncatula Barrel medic 1014 921
No Yes Phaseolus vulgaris v186 French bean 701 665
No Yes Glycine max v109 Soybean 1194 1130
No Yes Cucumis sativus v122 Cucumber 630 594
No Yes Fragaria vesca Wild strawberry 618 548
No Yes Malus domestica v196 Apple 963 888
No Yes Prunus persica v139 Peach 539 493
No Yes Linum usitatissimum v200 Flax 786 732
No Yes Manihot esculenta v147 Cassava 743 688
No Yes Populus trichocarpa v156 Black cottonwood 867 802
No Yes Vitis vinifera Wine grape 402 371
No Yes Mimulus guttatus v140 Spotted monkey flower 693 620
No Yes Solanum lycopersicum v.2.3 Tomato 593 550
No Yes Solanum tuberosum Potato 830 770
No Yes Actinidia chinensis Hongyang   558 520
No Yes Aquilegia coerulea v195   818 719
No Yes Triticum urartu 22   400 345
No Yes Triticum aestivum 22 Bread wheat 1306 1135
No Yes Aegilops tauschii 22   472 403
No Yes Brachypodium distachyon Stiff brome 694 642
No Yes Oryza barthii 22 African wild rice 734 593
No Yes Oryza meridionalis 22   760 642
No Yes Oryza glumaepatula 22   863 736
No Yes Oryza glaberrima African rice 556 493
No Yes Oryza punctata 22   815 718
No Yes Oryza nivara 22   889 764
No Yes Oryza brachyantha 22 Malo sina 502 444
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 880 793
No Yes Oryza sativa v193 Rice 872 785
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 579 531
No Yes Panicum virgatum v202 Switchgrass 1218 1075
No Yes Setaria italica v164 Foxtail millet 753 684
No Yes Zea mays subsp. mays Maize 1030 970
No Yes Zea mays v181 Maize 1104 1040
No Yes Sorghum bicolor Sorghum 629 567
No Yes Musa balbisiana Balbis banana 622 592
No Yes Musa acuminata 22 Wild Malaysian banana 701 660
No Yes Amborella trichopoda 22   343 319
No Yes Physcomitrella patens   352 312
No Yes Coccomyxa subellipsoidea sp. C-169 v2   117 102
No Yes Asterochloris sp. Cgr/DA1pho v1.0   88 81
No Yes Chlorella variabilis sp. NC64A   141 127
No Yes Chlorella vulgaris   92 83
No Yes Volvox carteri f. nagariensis   138 124
No Yes Volvox carteri v199   135 122
No Yes Chlamydomonas reinhardtii 4.0   143 133
No Yes Ostreococcus sp. RCC809   88 83
No Yes Ostreococcus lucimarinus CCE9901   88 81
No Yes Ostreococcus tauri   71 67
No Yes Bathycoccus prasinos   84 78
No Yes Micromonas sp. RCC299   127 117
No Yes Micromonas pusilla CCMP1545 v3.0   123 113
No Yes Cyanidioschyzon merolae strain 10D 22   54 50
No Yes Cyanidioschyzon merolae   54 50
No Yes Porphyridium purpureum 02_2012   84 83
No Yes Thecamonas trahens ATCC 50062   176 146
No Yes Bigelowiella natans CCMP2755 22   226 191
No Yes Giardia lamblia 2.3   73 67
No Yes Cyanophora paradoxa   192 186
No Yes Leishmania mexicana 2.4   77 74
No Yes Leishmania major strain Friedlin   80 78
No Yes Leishmania infantum JPCM5 2.4   77 74
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   76 73
No Yes Trypanosoma vivax   65 59
No Yes Trypanosoma cruzi strain CL Brener   64 60
No Yes Trypanosoma congolense 2.4   88 81
No Yes Trypanosoma brucei gambiense v4.1   75 69
No Yes Trypanosoma brucei TREU927 v4.1   74 69
No Yes Ectocarpus siliculosus   165 159
No Yes Aureococcus anophagefferens   149 131
No Yes Albugo laibachii 22   118 114
No Yes Pythium iwayamai DAOM BR242034 22   164 148
No Yes Pythium arrhenomanes ATCC 12531 22   167 146
No Yes Pythium ultimum v1.7-2   162 150
No Yes Pythium aphanidermatum DAOM BR444 22   154 136
No Yes Pythium irregulare DAOM BR486 22   171 157
No Yes Pythium vexans DAOM BR484 22   170 148
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 149 137
No Yes Phytophthora sojae 1.1   168 158
No Yes Phytophthora infestans T30-4   163 150
No Yes Phytophthora capsici   116 112
No Yes Hyaloperonospora arabidopsidis 22   115 107
No Yes Phaeodactylum tricornutumCCAP 1055/1   92 89
No Yes Fragilariopsis cylindrus   242 222
No Yes Thalassiosira pseudonana CCMP1335   101 95
No Yes Perkinsus marinus ATCC 50983   248 229
No Yes Paramecium tetraurelia   880 746
No Yes Tetrahymena thermophila SB210 1   402 322
No Yes Ichthyophthirius multifiliis strain G5   77 65
No Yes Cryptosporidium hominis   45 45
No Yes Cryptosporidium muris   58 56
No Yes Cryptosporidium parvum Iowa II   48 48
No Yes Neospora caninum   70 67
No Yes Toxoplasma gondii VEG   70 67
No Yes Toxoplasma gondii ME49   76 73
No Yes Toxoplasma gondii GT1   65 62
No Yes Babesia bovis T2Bo   78 78
No Yes Theileria parva   39 39
No Yes Theileria annulata   41 41
No Yes Plasmodium falciparum 3D7   52 50
No Yes Plasmodium vivax SaI-1 7.0   50 48
No Yes Plasmodium knowlesi strain H   52 50
No Yes Plasmodium yoelii ssp. yoelii 1   43 41
No Yes Plasmodium chabaudi   49 47
No Yes Plasmodium berghei ANKA   52 49
No Yes Symbiodinium minutum clade B1 v1.2   510 467
No Yes Naegleria gruberi   128 109
No Yes Trichomonas vaginalis   179 162
No Yes Guillardia theta CCMP2712 v1.0   253 235
No Yes Emiliania huxleyi CCMP1516   763 735
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   2 2
No Yes Modestobacter marinus   2 2
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Kineococcus radiotolerans SRS30216   4 4
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Frankia alni ACN14a   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   2 2
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   4 4
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   2 2
No Yes Nocardioides sp. JS614   2 2
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   2 2
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium sp. JLS   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   2 2
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   2 2
No Yes Micrococcus luteus NCTC 2665   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Candidatus Amoebophilus asiaticus 5a2   10 10
No Yes Candidatus Cardinium hertigii   1 1
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   2 2
No Yes Parachlamydia acanthamoebae UV-7   3 3
No Yes Simkania negevensis Z   2 2
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Spirochaeta smaragdinae DSM 11293   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Babela massiliensis   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Anaeromyxobacter sp. Fw109-5   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Caldiarchaeum subterraneum   3 3
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   2 2
No Yes Vulcanisaeta moutnovskia 768-28   1 1
No Yes Methanosarcina acetivorans C2A   1 1
No Yes Methanosarcina barkeri str. Fusaro   1 1
No Yes Methanothermococcus okinawensis IH1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 732 633
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 278 254
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 171 151
No Yes Ascaris suum Victoria/Ghent Pig roundworm 149 122
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 260 223
No Yes Cryptococcus neoformans var. grubii H99   63 53
No Yes Cryptococcus neoformans B-3501A   70 59
No Yes Cryptococcus neoformans JEC21   61 53
No Yes Paracoccidioides brasiliensis Pb01   69 58
No Yes Paracoccidioides brasiliensis Pb03   71 59
No Yes Coccidioides posadasii str. Silveira   88 77
No Yes Coccidioides immitis RMSCC 3703   68 59
No Yes Coccidioides immitis RMSCC 2394   85 74
No Yes Coccidioides immitis H538.4   74 67
No Yes Ajellomyces dermatitidis ER-3   89 76
No Yes Histoplasma capsulatum H143   62 58
No Yes Histoplasma capsulatum H88   80 70
No Yes Histoplasma capsulatum G186AR   77 67
No Yes Aspergillus fumigatus A1163   84 72
No Yes Candida albicans WO-1   48 44
No Yes Saccharomyces cerevisiae UC5   42 39
No Yes Saccharomyces cerevisiae PW5   44 41
No Yes Saccharomyces cerevisiae FL100   26 25
No Yes Saccharomyces cerevisiae CLIB382   2 2
No Yes Saccharomyces cerevisiae CLIB324   24 22
No Yes Saccharomyces cerevisiae CBS7960   36 34
No Yes Saccharomyces cerevisiae YJM269   37 35
No Yes Saccharomyces cerevisiae T7   52 49
No Yes Saccharomyces cerevisiae FostersB   29 29
No Yes Saccharomyces cerevisiae FostersO   41 38
No Yes Saccharomyces cerevisiae VL3   39 36
No Yes Saccharomyces cerevisiae Vin13   37 35
No Yes Saccharomyces cerevisiae LalvinQA23   43 41
No Yes Saccharomyces cerevisiae AWRI796   38 37
No Yes Saccharomyces cerevisiae Sigma1278b   52 49
No Yes Saccharomyces cerevisiae W303   52 49
No Yes Saccharomyces cerevisiae JAY291   52 49
No Yes Saccharomyces cerevisiae AWRI1631   38 35
No Yes Saccharomyces cerevisiae YPS163   19 19
No Yes Saccharomyces cerevisiae M22   14 14
No Yes Saccharomyces cerevisiae T73   22 20
No Yes Saccharomyces cerevisiae CLIB215   36 35
No Yes Saccharomyces cerevisiae Y10   17 16
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae YJM789   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae RM11-1a   53 50
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 53 50
No Yes Schizosaccharomyces pombe 972h-   68 59
No Yes Batrachochytrium dendrobatidis JEL423   79 73
No Yes Batrachochytrium dendrobatidis JAM81   87 80
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 499 459
No Yes Hordeum vulgare 22 Domesticated barley 977 863
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 616 557
No Yes Trypanosoma brucei Lister 427 v4.1   75 69
No Yes Neospora caninum Nc-Liverpool 6.2   70 67
No Yes Plasmodium falciparum HB3   47 45
No Yes Plasmodium falciparum Dd2   34 32
No Yes Dactylococcopsis salina PCC 8305   2 2
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Frankia sp. EuI1c   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   2 2
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   3 3
No Yes Rhodococcus erythropolis CCM2595   3 3
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium sp. KMS   2 2
No Yes Mycobacterium sp. MCS   2 2
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Singulisphaera acidiphila DSM 18658   2 2
No Yes Anaeromyxobacter sp. K   1 1
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia lata   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Legionella pneumophila str. Paris   3 2
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 2
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila   3 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 2
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanolobus psychrophilus R15   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1475 1373
No Yes Homo sapiens (NCBI version) Human 647 583
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 361 322
No Yes Heliconius numata (Incomplete)   38 35
No Yes Loa loa v3.3 (Request) Eye worm 143 127
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 121 107
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 109 94
No Yes Moniliophthora perniciosa FA553 (Genome survey)   27 26
No Yes Encephalitozoon intestinalis (endoparasite)   24 24
No Yes Encephalitozoon cuniculi (endoparasite)   25 25
No Yes Picea sitchensis (Incomplete) Sitka spruce 49 47
No Yes Lotus japonicus (Early assembly)   429 400
No Yes Malus x domestica (Duplicate) Apple 963 888
No Yes Ricinus communis (Early assembly) Castor bean 447 414
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   915 849
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 575 535
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 593 550
No Yes Phoenix dactylifera (Early draft) Date palm 209 196
No Yes Guillardia theta (nucleomorph)   3 3
No Yes Homo sapiens 69_37 Human 462 420
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 340 306
No Yes Gorilla gorilla 69_3.1 Western gorilla 350 321
No Yes Pongo abelii 69_2 Sumatran orangutan 339 307
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 333 297
No Yes Macaca mulatta 69_1 Rhesus monkey 348 314
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 368 331
No Yes Otolemur garnettii 69_3 Small-eared galago 356 321
No Yes Microcebus murinus 69_1 Gray mouse lemur 229 213
No Yes Rattus norvegicus 69_3.4 Norway rat 320 286
No Yes Mus musculus 69_38 House mouse 360 324
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 232 214
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 314 289
No Yes Cavia porcellus 69_3 Domestic guinea pig 315 283
No Yes Oryctolagus cuniculus 69_2 Rabbit 328 296
No Yes Ochotona princeps 69 American pika 258 237
No Yes Tupaia belangeri 69 Northern tree shrew 206 189
No Yes Sus scrofa 69_10.2 Pig 337 301
No Yes Bos taurus 69_3.1 Cattle 343 307
No Yes Vicugna pacos 69_1 Alpaca 185 165
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 297 266
No Yes Mustela putorius furo 69_1.0 Domestic ferret 322 289
No Yes Ailuropoda melanoleuca 69_1 Giant panda 332 296
No Yes Canis familiaris 69_3.1 Dog 335 298
No Yes Felis catus 69 Domestic cat 217 194
No Yes Equus caballus 69_2 Horse 319 284
No Yes Myotis lucifugus 69_2.0 Little brown bat 349 315
No Yes Pteropus vampyrus 69_1 Large flying fox 299 265
No Yes Sorex araneus 69_1 European shrew 213 190
No Yes Erinaceus europaeus 69 Western European hedgehog 214 202
No Yes Procavia capensis 69_1 Cape rock hyrax 241 216
No Yes Loxodonta africana 69_3 African savanna elephant 353 322
No Yes Echinops telfairi 69 Small Madagascar hedgehog 228 208
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 209 188
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 202 184
No Yes Macropus eugenii 69_1.0 Tammar wallaby 216 200
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 332 299
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 376 341
No Yes Ornithorhynchus anatinus 69_5 Platypus 234 217
No Yes Petromyzon marinus 69_7.0 Sea lamprey 159 145
No Yes Meleagris gallopavo 69_2 Turkey 236 212
No Yes Gallus gallus 69_2 Chicken 261 234
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 247 220
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 338 313
No Yes Anolis carolinensis 69_2.0 Green anole 312 279
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 396 353
No Yes Latimeria chalumnae 69_1 Coelacanth 399 366
No Yes Gadus morhua 69_1 Atlantic cod 379 341
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 351 311
No Yes Takifugu rubripes 69_4 Torafugu 360 316
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 433 391
No Yes Oryzias latipes 69_1 Japanese medaka 389 337
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 387 340
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 522 475
No Yes Danio rerio 69_9 Zebrafish 533 483
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 114 102
No Yes Ciona intestinalis 69 Vase tunicate 148 129
No Yes Drosophila melanogaster 69_5 Fruit fly 168 153
No Yes Caenorhabditis elegans 69_215 Roundworm 218 194
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 53 50
No Yes Arabidopsis thaliana 10 Thale cress 660 581
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   4 4
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   3 3
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   2 2
No Yes Core Eukaryotic Genes 458 (CEGMA)   12 12
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   14 13
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   15 15
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   11 11
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   319979 287388
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2385 2206
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   55 54
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   34 33
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   21 21
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   20 20
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   24646 21986
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   17 17
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   6 6
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   298266 266696
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   2232 2204
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   510 507
No Yes PDB chains (SCOP 1.75) (PDB)   32 32
No Yes Protein Data Bank (all PDB sequenc)   626 573
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   692 692
No Yes TargetDB (Targets)   806 721
No Yes UniProt viral sequences (Viral)   500 498

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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