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LDL receptor-like module superfamily domain assignments
in
Xenopus tropicalis 76_4.2

Assignment details

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Xenopus tropicalis 76_4.2 has 231 significant domains in 62 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSXETP00000000090   0.00000249   57-91   LDL receptor-like module  
ENSXETP00000000106   0.00000111   103-134   LDL receptor-like module  
  0.00000157   143-176   LDL receptor-like module  
ENSXETP00000000109   0.000000393   95-132   LDL receptor-like module  
ENSXETP00000002790   0.0000000000537   307-344   LDL receptor-like module  
  0.000000000055   32-76   LDL receptor-like module  
  0.000000000119   188-225   LDL receptor-like module  
  0.000000000157   350-394   LDL receptor-like module  
  0.000000000432   228-263   LDL receptor-like module  
  0.000000000589   115-152   LDL receptor-like module  
  0.00000000107   267-305   LDL receptor-like module  
  0.00000000275   74-111   LDL receptor-like module  
  0.00000000301   436-473   LDL receptor-like module  
  0.0000000262   1-29   LDL receptor-like module  
  0.00000511   395-428   LDL receptor-like module  
ENSXETP00000003741   0.000000157   185-225   LDL receptor-like module  
ENSXETP00000004396   0.0000000000249   421-459   LDL receptor-like module  
ENSXETP00000005353   0.00000654   10-43   LDL receptor-like module  
ENSXETP00000007281   0.0000000000119   539-584   LDL receptor-like module  
  0.000000000144   504-538   LDL receptor-like module  
ENSXETP00000007282   0.0000000000445   414-450   LDL receptor-like module  
  0.000000000471   320-359   LDL receptor-like module  
  0.00000000511   373-409   LDL receptor-like module  
  0.0000000102   284-321   LDL receptor-like module  
  0.0000000406   243-280   LDL receptor-like module  
ENSXETP00000007285   0.00000000000393   42-79   LDL receptor-like module  
  0.00000000013   85-121   LDL receptor-like module  
  0.000000000602   3-40   LDL receptor-like module  
  0.0000000419   140-171   LDL receptor-like module  
  0.0000000563   174-210   LDL receptor-like module  
ENSXETP00000007628   0.00000000497   140-173   LDL receptor-like module  
ENSXETP00000008492   0.0000000314   294-330   LDL receptor-like module  
ENSXETP00000008495   0.0000000314   287-323   LDL receptor-like module  
ENSXETP00000008551   0.00000000314   210-248   LDL receptor-like module  
ENSXETP00000008794   0.0000000000157   426-464   LDL receptor-like module  
  0.000000000183   142-178   LDL receptor-like module  
  0.0000000969   387-425   LDL receptor-like module  
  0.000000183   188-230   LDL receptor-like module  
  0.000000628   350-387   LDL receptor-like module  
ENSXETP00000009379   0.000000000956   649-688   LDL receptor-like module  
  0.00000000115   377-418   LDL receptor-like module  
  0.00000000118   297-335   LDL receptor-like module  
  0.00000000157   339-373   LDL receptor-like module  
  0.00000000288   574-611   LDL receptor-like module  
  0.0000131   615-647   LDL receptor-like module  
ENSXETP00000011107   0.0000000000419   181-221   LDL receptor-like module  
  0.0000000000537   219-259   LDL receptor-like module  
  0.000000000105   265-300   LDL receptor-like module  
  0.000000000484   27-65   LDL receptor-like module  
  0.00000000127   102-141   LDL receptor-like module  
  0.00000000497   63-101   LDL receptor-like module  
  0.00000419   2-27   LDL receptor-like module  
ENSXETP00000011315   0.000000628   50-85   LDL receptor-like module  
ENSXETP00000013097   0.000000128   147-179   LDL receptor-like module  
  0.00000196   104-135   LDL receptor-like module  
ENSXETP00000013099   0.00000236   302-333   LDL receptor-like module  
  0.00000589   208-244   LDL receptor-like module  
  0.00000681   122-158   LDL receptor-like module  
  0.0000144   75-112   LDL receptor-like module  
  0.0000196   4-41   LDL receptor-like module  
  0.0000249   259-293   LDL receptor-like module  
ENSXETP00000014789   0.000000412   106-136   LDL receptor-like module  
ENSXETP00000017690   0.0000000000128   94-132   LDL receptor-like module  
  0.0000000000288   181-219   LDL receptor-like module  
  0.0000000000733   130-170   LDL receptor-like module  
  0.0000000000877   4-47   LDL receptor-like module  
  0.000000000772   221-257   LDL receptor-like module  
  0.00000000367   53-93   LDL receptor-like module  
ENSXETP00000019554   0.00000000102   1326-1364   LDL receptor-like module  
  0.00000000497   1248-1286   LDL receptor-like module  
  0.0000000072   1288-1323   LDL receptor-like module  
ENSXETP00000020614   0.0000000000537   27-65   LDL receptor-like module  
  0.000000000055   144-185   LDL receptor-like module  
  0.0000000000759   195-232   LDL receptor-like module  
  0.000000000393   64-107   LDL receptor-like module  
  0.00000000144   234-271   LDL receptor-like module  
  0.00000000327   109-146   LDL receptor-like module  
  0.000000131   277-312   LDL receptor-like module  
ENSXETP00000022100   0.00000000196   1321-1356   LDL receptor-like module  
  0.00000000327   1242-1282   LDL receptor-like module  
  0.00000000327   1283-1319   LDL receptor-like module  
ENSXETP00000022319   0.000000628   204-242   LDL receptor-like module  
ENSXETP00000023921   0.000000000072   846-886   LDL receptor-like module  
  0.0000000000877   3595-3632   LDL receptor-like module  
  0.000000000113   3553-3593   LDL receptor-like module  
  0.000000000209   3637-3681   LDL receptor-like module  
  0.000000000301   928-967   LDL receptor-like module  
  0.000000000301   2687-2723   LDL receptor-like module  
  0.000000000406   1011-1048   LDL receptor-like module  
  0.000000000484   24-64   LDL receptor-like module  
  0.000000000563   3353-3392   LDL receptor-like module  
  0.000000000641   2896-2937   LDL receptor-like module  
  0.000000000681   887-929   LDL receptor-like module  
  0.00000000127   3515-3554   LDL receptor-like module  
  0.00000000157   1055-1095   LDL receptor-like module  
  0.00000000275   972-1010   LDL receptor-like module  
  0.00000000301   2808-2844   LDL receptor-like module  
  0.00000000353   3472-3511   LDL receptor-like module  
  0.00000000537   2766-2800   LDL receptor-like module  
  0.00000000641   3432-3472   LDL receptor-like module  
  0.0000000115   2726-2759   LDL receptor-like module  
  0.0000000183   3395-3433   LDL receptor-like module  
  0.0000000223   3316-3351   LDL receptor-like module  
  0.0000000249   2846-2885   LDL receptor-like module  
  0.0000000262   2552-2593   LDL receptor-like module  
  0.0000000563   2593-2632   LDL receptor-like module  
  0.000000196   72-107   LDL receptor-like module  
  0.000000353   1141-1177   LDL receptor-like module  
  0.000000432   3682-3715   LDL receptor-like module  
  0.000000785   2516-2554   LDL receptor-like module  
  0.00000107   1106-1138   LDL receptor-like module  
  0.00000144   2651-2682   LDL receptor-like module  
ENSXETP00000024355   0.000000772   101-137   LDL receptor-like module  
ENSXETP00000024358   0.00000013   87-128   LDL receptor-like module  
ENSXETP00000025166   0.00000000942   41-78   LDL receptor-like module  
ENSXETP00000025606   0.00000000000641   26-66   LDL receptor-like module  
  0.00000000000759   146-187   LDL receptor-like module  
  0.0000000000144   233-271   LDL receptor-like module  
  0.0000000000916   270-310   LDL receptor-like module  
  0.000000000209   185-223   LDL receptor-like module  
  0.000000000262   68-107   LDL receptor-like module  
  0.00000000262   105-147   LDL receptor-like module  
  0.0000000301   315-353   LDL receptor-like module  
ENSXETP00000035000   0.00000107   496-535   LDL receptor-like module  
  0.0000183   454-486   LDL receptor-like module  
  0.0000458   420-453   LDL receptor-like module  
ENSXETP00000035400   0.0000000000034   2706-2748   LDL receptor-like module  
  0.0000000000038   1-35   LDL receptor-like module  
  0.0000000000236   1236-1277   LDL receptor-like module  
  0.0000000000353   1077-1114   LDL receptor-like module  
  0.000000000038   1036-1073   LDL receptor-like module  
  0.0000000000589   3599-3639   LDL receptor-like module  
  0.0000000000772   73-114   LDL receptor-like module  
  0.0000000000877   1117-1155   LDL receptor-like module  
  0.000000000089   2829-2869   LDL receptor-like module  
  0.0000000000956   2998-3040   LDL receptor-like module  
  0.000000000119   2958-3000   LDL receptor-like module  
  0.000000000196   187-228   LDL receptor-like module  
  0.000000000236   2873-2911   LDL receptor-like module  
  0.000000000353   3769-3807   LDL receptor-like module  
  0.000000000432   34-74   LDL receptor-like module  
  0.000000000694   993-1031   LDL receptor-like module  
  0.00000000111   3812-3846   LDL receptor-like module  
  0.00000000144   3518-3561   LDL receptor-like module  
  0.00000000157   1200-1236   LDL receptor-like module  
  0.00000000157   3482-3517   LDL receptor-like module  
  0.00000000236   3693-3726   LDL receptor-like module  
  0.00000000262   153-189   LDL receptor-like module  
  0.00000000275   2671-2715   LDL receptor-like module  
  0.00000000314   3557-3600   LDL receptor-like module  
  0.00000000353   3897-3934   LDL receptor-like module  
  0.00000000746   3725-3765   LDL receptor-like module  
  0.0000000144   2785-2831   LDL receptor-like module  
  0.0000000144   1156-1195   LDL receptor-like module  
  0.0000000759   3046-3086   LDL receptor-like module  
  0.0000000772   2915-2958   LDL receptor-like module  
  0.0000000969   3854-3892   LDL receptor-like module  
  0.000000109   1281-1317   LDL receptor-like module  
  0.000000157   118-151   LDL receptor-like module  
  0.00000209   2754-2790   LDL receptor-like module  
  0.00000903   3653-3686   LDL receptor-like module  
ENSXETP00000036749   0.0000000249   290-326   LDL receptor-like module  
ENSXETP00000036914   0.00000000000223   1411-1448   LDL receptor-like module  
  0.0000000000157   1315-1352   LDL receptor-like module  
  0.000000000101   1149-1186   LDL receptor-like module  
  0.000000000236   1189-1227   LDL receptor-like module  
  0.000000000458   1359-1396   LDL receptor-like module  
  0.000000000576   1068-1106   LDL receptor-like module  
  0.0000000183   1231-1264   LDL receptor-like module  
  0.000000183   1463-1503   LDL receptor-like module  
  0.000000262   1109-1147   LDL receptor-like module  
  0.00000236   1267-1304   LDL receptor-like module  
  0.00000733   1508-1543   LDL receptor-like module  
ENSXETP00000038018   0.0000000314   195-233   LDL receptor-like module  
ENSXETP00000038816   0.000000000017   240-277   LDL receptor-like module  
  0.000000000223   199-236   LDL receptor-like module  
  0.00000000183   114-152   LDL receptor-like module  
  0.00000000484   284-326   LDL receptor-like module  
ENSXETP00000038826   0.000000000641   435-476   LDL receptor-like module  
  0.00000000458   511-547   LDL receptor-like module  
  0.00000000812   474-513   LDL receptor-like module  
  0.000000288   551-590   LDL receptor-like module  
ENSXETP00000041596   0.000000144   25-62   LDL receptor-like module  
ENSXETP00000046585   0.000000017   284-321   LDL receptor-like module  
ENSXETP00000046684   0.000000000017   270-310   LDL receptor-like module  
  0.00000000183   113-149   LDL receptor-like module  
ENSXETP00000047077   0.0000000000812   108-146   LDL receptor-like module  
  0.000000000111   27-63   LDL receptor-like module  
  0.00000000017   67-106   LDL receptor-like module  
ENSXETP00000048449   0.00000000000484   25-67   LDL receptor-like module  
ENSXETP00000048946   0.000000000236   243-281   LDL receptor-like module  
  0.0000000759   1-37   LDL receptor-like module  
  0.00000864   205-241   LDL receptor-like module  
  0.000196   178-203   LDL receptor-like module  
ENSXETP00000052014   0.0000000089   218-256   LDL receptor-like module  
  0.000000406   262-294   LDL receptor-like module  
ENSXETP00000055091   0.00000000196   52-89   LDL receptor-like module  
ENSXETP00000055441   0.00000000327   197-235   LDL receptor-like module  
ENSXETP00000055445   0.00000000314   232-270   LDL receptor-like module  
ENSXETP00000059072   0.00000000497   140-173   LDL receptor-like module  
ENSXETP00000060226   0.00000000772   217-255   LDL receptor-like module  
  0.000000668   261-291   LDL receptor-like module  
ENSXETP00000060587   0.0000000000124   71-114   LDL receptor-like module  
  0.0000000000249   1-35   LDL receptor-like module  
  0.0000000157   41-75   LDL receptor-like module  
  0.000000017   160-196   LDL receptor-like module  
  0.00000017   113-152   LDL receptor-like module  
ENSXETP00000060870   0.0000000157   93-133   LDL receptor-like module  
ENSXETP00000061192   0.00000000615   217-255   LDL receptor-like module  
  0.000000196   261-293   LDL receptor-like module  
ENSXETP00000061604   0.000000563   5-38   LDL receptor-like module  
ENSXETP00000062218   0.00000000223   142-175   LDL receptor-like module  
ENSXETP00000062289   0.000000249   1-32   LDL receptor-like module  
ENSXETP00000062340   0.000000000314   1411-1452   LDL receptor-like module  
  0.00000000117   1491-1530   LDL receptor-like module  
  0.00000000144   1561-1598   LDL receptor-like module  
  0.00000000196   2393-2432   LDL receptor-like module  
  0.0000000117   2455-2491   LDL receptor-like module  
  0.0000000157   2243-2281   LDL receptor-like module  
  0.0000000196   1374-1412   LDL receptor-like module  
  0.0000000301   1451-1486   LDL receptor-like module  
  0.00000113   1600-1636   LDL receptor-like module  
  0.00017   1658-1687   LDL receptor-like module  
ENSXETP00000062395   0.00000000000484   25-67   LDL receptor-like module  
ENSXETP00000063177   0.000000615   49-84   LDL receptor-like module  
  0.0000812   95-125   LDL receptor-like module  
  0.000524   130-172   LDL receptor-like module  
ENSXETP00000063593   0.000000759   298-336   LDL receptor-like module  
ENSXETP00000063707   0.000000087   61-102   LDL receptor-like module  
ENSXETP00000064118   0.00000000000916   402-440   LDL receptor-like module  
  0.0000000000262   122-159   LDL receptor-like module  
  0.000000105   167-208   LDL receptor-like module  
  0.000000484   363-400   LDL receptor-like module  
  0.000000877   325-362   LDL receptor-like module  
 
Weak hits:
ENSXETP00000001849   0.0119   160-177   LDL receptor-like module  
ENSXETP00000022322   0.000511   1-25   LDL receptor-like module  
ENSXETP00000036514   0.000732   38-71   LDL receptor-like module  
  0.0288   88-110   LDL receptor-like module  
ENSXETP00000059601   0.000608   73-112   LDL receptor-like module  
  0.000681   39-70   LDL receptor-like module  
ENSXETP00000063508   0.00133   79-123   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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