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LDL receptor-like module superfamily domain assignments
in
Drosophila pseudoobscura 2.13

Assignment details

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Drosophila pseudoobscura 2.13 has 181 significant domains in 42 proteins.

     

Sequence ID   Evalue   Region   Family  
FBpp0272120   0.0000000000196   1402-1439   LDL receptor-like module  
  0.000000000353   1358-1394   LDL receptor-like module  
  0.000000000524   1061-1099   LDL receptor-like module  
  0.00000000157   613-650   LDL receptor-like module  
  0.00000000327   1022-1056   LDL receptor-like module  
  0.00000000445   410-450   LDL receptor-like module  
  0.00000000877   3515-3554   LDL receptor-like module  
  0.0000000106   326-362   LDL receptor-like module  
  0.0000000249   1132-1170   LDL receptor-like module  
  0.0000000327   1316-1354   LDL receptor-like module  
  0.0000000406   849-887   LDL receptor-like module  
  0.0000000851   155-191   LDL receptor-like module  
  0.000000196   196-232   LDL receptor-like module  
  0.000000249   564-601   LDL receptor-like module  
  0.000000262   665-705   LDL receptor-like module  
  0.000000471   982-1019   LDL receptor-like module  
  0.000000511   239-280   LDL receptor-like module  
  0.00000157   785-825   LDL receptor-like module  
  0.00000183   746-783   LDL receptor-like module  
  0.00000419   900-937   LDL receptor-like module  
  0.0000118   530-561   LDL receptor-like module  
  0.0000183   710-745   LDL receptor-like module  
  0.0000288   945-982   LDL receptor-like module  
  0.000123   280-315   LDL receptor-like module  
FBpp0273604   0.000000000367   179-214   LDL receptor-like module  
  0.000000262   213-260   LDL receptor-like module  
FBpp0273605   0.00000000000249   2632-2675   LDL receptor-like module  
  0.0000000000118   957-998   LDL receptor-like module  
  0.000000000144   2757-2799   LDL receptor-like module  
  0.000000000367   101-142   LDL receptor-like module  
  0.000000000511   3683-3720   LDL receptor-like module  
  0.000000000654   3472-3512   LDL receptor-like module  
  0.00000000106   3724-3761   LDL receptor-like module  
  0.00000000236   2938-2977   LDL receptor-like module  
  0.00000000288   2982-3016   LDL receptor-like module  
  0.00000000288   1001-1037   LDL receptor-like module  
  0.00000000327   2597-2635   LDL receptor-like module  
  0.00000000445   3557-3595   LDL receptor-like module  
  0.00000000628   2898-2933   LDL receptor-like module  
  0.00000000628   1042-1079   LDL receptor-like module  
  0.00000000851   3767-3804   LDL receptor-like module  
  0.0000000103   2806-2842   LDL receptor-like module  
  0.0000000115   3515-3553   LDL receptor-like module  
  0.0000000209   922-957   LDL receptor-like module  
  0.0000000209   3855-3891   LDL receptor-like module  
  0.0000000301   1130-1162   LDL receptor-like module  
  0.0000000353   2673-2714   LDL receptor-like module  
  0.0000000419   1078-1119   LDL receptor-like module  
  0.0000000497   3810-3846   LDL receptor-like module  
  0.0000000825   66-103   LDL receptor-like module  
  0.000000144   1165-1199   LDL receptor-like module  
  0.00000017   2721-2759   LDL receptor-like module  
  0.000000196   3434-3469   LDL receptor-like module  
  0.000000471   3641-3679   LDL receptor-like module  
  0.000000681   3593-3637   LDL receptor-like module  
  0.00000196   1209-1244   LDL receptor-like module  
  0.0000236   2853-2891   LDL receptor-like module  
  0.000746   38-62   LDL receptor-like module  
FBpp0273992   0.0000000432   439-471   LDL receptor-like module  
FBpp0274879   0.00000000223   241-274   LDL receptor-like module  
  0.0000432   1228-1263   LDL receptor-like module  
FBpp0275580   0.0000000144   1445-1479   LDL receptor-like module  
  0.0000000209   1489-1525   LDL receptor-like module  
  0.0000000327   1534-1572   LDL receptor-like module  
  0.0000864   1603-1637   LDL receptor-like module  
FBpp0275739   0.00000000288   50-87   LDL receptor-like module  
  0.0942   37-49   LDL receptor-like module  
FBpp0276236   0.0000000209   894-931   LDL receptor-like module  
  0.000000157   858-892   LDL receptor-like module  
FBpp0276541   0.0000000497   1325-1372   LDL receptor-like module  
  0.0000000759   1373-1409   LDL receptor-like module  
  0.00000101   1412-1447   LDL receptor-like module  
FBpp0277390   0.0000000000681   3458-3497   LDL receptor-like module  
  0.000000000131   3375-3415   LDL receptor-like module  
  0.000000000131   2607-2644   LDL receptor-like module  
  0.000000000249   3292-3332   LDL receptor-like module  
  0.00000000102   3575-3612   LDL receptor-like module  
  0.00000000106   2445-2484   LDL receptor-like module  
  0.00000000196   3657-3695   LDL receptor-like module  
  0.00000000367   3495-3535   LDL receptor-like module  
  0.00000000458   2482-2523   LDL receptor-like module  
  0.00000000471   2523-2560   LDL receptor-like module  
  0.0000000118   3419-3453   LDL receptor-like module  
  0.0000000275   3537-3576   LDL receptor-like module  
  0.0000000419   3610-3653   LDL receptor-like module  
  0.0000000563   2685-2717   LDL receptor-like module  
  0.0000000694   2785-2819   LDL receptor-like module  
  0.000000144   1073-1112   LDL receptor-like module  
  0.000000183   3256-3292   LDL receptor-like module  
  0.000000314   2825-2861   LDL receptor-like module  
  0.000000694   938-976   LDL receptor-like module  
  0.000000707   2734-2770   LDL receptor-like module  
  0.000000969   20-59   LDL receptor-like module  
  0.00000314   2646-2677   LDL receptor-like module  
  0.00000353   2573-2603   LDL receptor-like module  
  0.0000101   856-890   LDL receptor-like module  
  0.0000128   1019-1056   LDL receptor-like module  
  0.00017   3331-3377   LDL receptor-like module  
  0.000183   983-1016   LDL receptor-like module  
  0.000183   1123-1157   LDL receptor-like module  
  0.000641   64-98   LDL receptor-like module  
  0.0144   897-936   LDL receptor-like module  
FBpp0277828   0.00000000122   55-89   LDL receptor-like module  
  0.00000000445   9-54   LDL receptor-like module  
FBpp0277899   0.00000288   509-549   LDL receptor-like module  
FBpp0278434   0.000000000694   62-104   LDL receptor-like module  
  0.000000000812   112-153   LDL receptor-like module  
  0.000000275   30-63   LDL receptor-like module  
FBpp0279420   0.00000000117   121-161   LDL receptor-like module  
FBpp0279575   0.000000000798   23-61   LDL receptor-like module  
FBpp0279841   0.0000219   2472-2509   LDL receptor-like module  
FBpp0280092   0.0000000785   180-213   LDL receptor-like module  
FBpp0280394   0.00000000128   675-714   LDL receptor-like module  
  0.0000000055   433-467   LDL receptor-like module  
  0.000000668   470-508   LDL receptor-like module  
FBpp0281023   0.000000000017   165-206   LDL receptor-like module  
  0.00000000223   81-117   LDL receptor-like module  
  0.00000106   130-166   LDL receptor-like module  
  0.0000995   41-70   LDL receptor-like module  
FBpp0281416   0.000000000327   27-67   LDL receptor-like module  
FBpp0281453   0.00000000183   1183-1218   LDL receptor-like module  
  0.00000000367   1224-1261   LDL receptor-like module  
  0.00000000445   1097-1135   LDL receptor-like module  
  0.0000000119   1310-1350   LDL receptor-like module  
  0.0000000236   1140-1177   LDL receptor-like module  
  0.0000000327   1360-1397   LDL receptor-like module  
  0.0000000537   100-137   LDL receptor-like module  
  0.000000107   198-234   LDL receptor-like module  
  0.000000406   239-277   LDL receptor-like module  
  0.000000628   284-316   LDL receptor-like module  
  0.00000353   1269-1307   LDL receptor-like module  
  0.00000393   141-180   LDL receptor-like module  
  0.00000628   1055-1086   LDL receptor-like module  
FBpp0281798   0.000000000275   26-64   LDL receptor-like module  
  0.000000000563   161-204   LDL receptor-like module  
  0.0000000615   69-103   LDL receptor-like module  
  0.00017   122-154   LDL receptor-like module  
FBpp0282324   0.00000249   191-239   LDL receptor-like module  
FBpp0283054   0.00000393   426-463   LDL receptor-like module  
FBpp0283960   0.00000000393   550-589   LDL receptor-like module  
  0.00055   517-548   LDL receptor-like module  
FBpp0284047   0.000000497   723-762   LDL receptor-like module  
FBpp0284341   0.000000327   113-158   LDL receptor-like module  
FBpp0284561   0.0000000000157   318-355   LDL receptor-like module  
  0.000000000017   195-236   LDL receptor-like module  
  0.000000000131   439-480   LDL receptor-like module  
  0.000000000249   278-316   LDL receptor-like module  
  0.00000000113   156-190   LDL receptor-like module  
  0.00000000249   358-395   LDL receptor-like module  
  0.00000000537   239-275   LDL receptor-like module  
  0.0000000641   491-525   LDL receptor-like module  
  0.0000000694   402-441   LDL receptor-like module  
FBpp0284562   0.00000000000668   235-273   LDL receptor-like module  
  0.000000000107   315-353   LDL receptor-like module  
  0.000000000157   477-519   LDL receptor-like module  
  0.000000000196   356-392   LDL receptor-like module  
  0.000000000367   189-226   LDL receptor-like module  
  0.00000000353   396-430   LDL receptor-like module  
  0.00000000353   276-313   LDL receptor-like module  
  0.0000000864   441-480   LDL receptor-like module  
  0.000000157   528-562   LDL receptor-like module  
FBpp0284741   0.00000000209   121-163   LDL receptor-like module  
  0.00000000432   84-122   LDL receptor-like module  
  0.00000223   31-67   LDL receptor-like module  
  0.00537   8-28   LDL receptor-like module  
FBpp0284947   0.0000000772   52-90   LDL receptor-like module  
FBpp0285584   0.0000000000128   74-111   LDL receptor-like module  
  0.00000000012   247-285   LDL receptor-like module  
  0.000000000157   115-160   LDL receptor-like module  
  0.00000000314   204-241   LDL receptor-like module  
  0.00000012   154-201   LDL receptor-like module  
  0.000000668   40-71   LDL receptor-like module  
FBpp0286068   0.00000000576   122-159   LDL receptor-like module  
FBpp0286069   0.0000000089   154-190   LDL receptor-like module  
FBpp0286099   0.000000101   39-79   LDL receptor-like module  
  0.000942   1138-1173   LDL receptor-like module  
FBpp0286908   0.000000511   191-222   LDL receptor-like module  
FBpp0286973   0.000000589   2294-2331   LDL receptor-like module  
  0.00000117   1649-1686   LDL receptor-like module  
  0.00000223   1321-1356   LDL receptor-like module  
  0.00000236   2222-2257   LDL receptor-like module  
  0.00000262   822-857   LDL receptor-like module  
  0.00000628   2182-2215   LDL receptor-like module  
  0.00000982   1583-1622   LDL receptor-like module  
  0.00419   909-934   LDL receptor-like module  
  0.017   2261-2292   LDL receptor-like module  
  0.038   1628-1646   LDL receptor-like module  
  0.0537   855-882   LDL receptor-like module  
FBpp0287336   0.0000641   198-229   LDL receptor-like module  
FBpp0287712   0.00000144   889-921   LDL receptor-like module  
FBpp0287828   0.00000000288   212-249   LDL receptor-like module  
FBpp0287951   0.000000772   68-103   LDL receptor-like module  
  0.00000301   22-56   LDL receptor-like module  
  0.00000537   118-156   LDL receptor-like module  
  0.0000262   160-192   LDL receptor-like module  
FBpp0288328   0.00000000458   958-999   LDL receptor-like module  
  0.000000484   816-849   LDL receptor-like module  
 
Weak hits:
FBpp0276034   0.00294   835-860   LDL receptor-like module  
FBpp0277094   0.00017   44-78   LDL receptor-like module  
FBpp0278795   0.00034   461-498   LDL receptor-like module  
FBpp0280924   0.000115   48-81   LDL receptor-like module  
  0.000123   83-122   LDL receptor-like module  
FBpp0282190   0.0458   161-205   LDL receptor-like module  
FBpp0287019   0.00206   2509-2542   LDL receptor-like module  
FBpp0287185   0.000497   117-149   LDL receptor-like module  
  0.00759   91-114   LDL receptor-like module  
FBpp0287380   0.000209   72-98   LDL receptor-like module  
  0.0654   99-136   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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