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  Home > Genomes > Acromyrmex echinatior v3.8 > Invertebrate chitin-binding proteins domains


Invertebrate chitin-binding proteins superfamily domain assignments
in
Acromyrmex echinatior v3.8

Assignment details

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Acromyrmex echinatior v3.8 has 78 significant domains in 41 proteins.

     

Sequence ID   Evalue   Region   Family  
Aech_01774   0.000000602   477-532   Tachycitin  
Aech_01985   0.000000000102   33-98   Tachycitin  
Aech_02429   0.0000000034   7-67   Antifungal peptide scarabaecin  
Aech_03028   3.92e-20   25-83   Tachycitin  
Aech_03277   0.000000000915   1600-1644   Tachycitin  
Aech_03717   0.0000000000000105   120-190   Tachycitin  
  0.00000000000785   56-115   Tachycitin  
  0.0000000000628   203-252   Tachycitin  
Aech_03718   0.0000000000000034   84-146   Tachycitin  
  0.0000000000000183   176-223   Tachycitin  
  0.00000000000102   20-85   Tachycitin  
Aech_03719   0.0000000000000785   27-89   Tachycitin  
  0.00000000000139   181-231   Tachycitin  
  0.00000000000497   96-150   Tachycitin  
Aech_03720   0.0000000000968   161-220   Tachycitin  
  0.000000000136   18-80   Tachycitin  
  0.000000000575   88-152   Tachycitin  
Aech_03721   0.00000000000000732   93-156   Tachycitin  
  0.0000000000000418   156-217   Tachycitin  
  0.00000000418   31-93   Tachycitin  
Aech_03723   0.00000000000011   182-243   Tachycitin  
  0.000000000000246   107-174   Tachycitin  
  0.0000523   441-495   Tachycitin  
Aech_03725   0.0000000000000366   86-149   Tachycitin  
  0.000000000000863   21-86   Tachycitin  
  0.000000000471   166-221   Tachycitin  
Aech_04866   0.00000000000144   483-534   Tachycitin  
Aech_05072   0.0000157   199-254   Tachycitin  
  0.0000241   270-325   Tachycitin  
Aech_05144   0.00000000000497   47-94   Tachycitin  
Aech_05937   0.0000000497   156-212   Tachycitin  
Aech_05939   0.0000000000000445   48-107   Tachycitin  
Aech_05942   0.0000000288   57-120   Antifungal peptide scarabaecin  
Aech_06288   0.00000000000000128   114-182   Tachycitin  
  0.0000000000000173   189-253   Tachycitin  
  0.0000000000549   50-111   Tachycitin  
Aech_06692   0.000000000000204   334-401   Tachycitin  
  0.0000000000259   264-320   Tachycitin  
  0.00000000706   1693-1754   Tachycitin  
Aech_07019   0.000000000194   499-555   Tachycitin  
Aech_07020   0.00000000000000942   36-98   Tachycitin  
Aech_07192   0.0000000000000183   121-178   Tachycitin  
  0.0000186   43-86   Tachycitin  
Aech_07193   0.000000000000115   129-194   Tachycitin  
  0.00000000000144   219-286   Tachycitin  
Aech_07859   0.000000149   44-104   Tachycitin  
  0.00000759   172-227   Tachycitin  
  0.0000706   119-167   Tachycitin  
Aech_07946   0.00000000915   27-91   Tachycitin  
  0.0000000602   91-152   Tachycitin  
Aech_08595   0.000000000000418   1138-1189   Tachycitin  
  0.000000000000445   112-166   Tachycitin  
  0.000000000000863   177-235   Tachycitin  
Aech_09392   0.0000000251   55-94   Tachycitin  
Aech_09476   0.00000000732   70-122   Tachycitin  
Aech_09602   0.00000000418   138-200   Tachycitin  
Aech_09878   0.00000000000366   30-90   Tachycitin  
  0.0000000000314   224-285   Tachycitin  
  0.0000000000445   101-153   Tachycitin  
  0.000000000207   305-361   Tachycitin  
  0.00000000068   373-422   Tachycitin  
  0.0000000012   168-221   Tachycitin  
Aech_10057   0.00000000000000366   917-983   Tachycitin  
Aech_11566   0.0000000000259   148-206   Tachycitin  
Aech_11570   0.0000000000146   434-492   Tachycitin  
Aech_12947   0.00000000392   336-393   Tachycitin  
  0.00000017   25-82   Tachycitin  
  0.00628   418-466   Antifungal peptide scarabaecin  
Aech_13289   2.54e-16   190-252   Tachycitin  
Aech_13637   0.000000000811   279-345   Tachycitin  
Aech_16066   9.94e-18   298-356   Tachycitin  
  7.06e-17   383-442   Tachycitin  
  0.00000000000162   221-277   Tachycitin  
Aech_16067   0.0000000000811   1-47   Tachycitin  
Aech_17242   0.000000000000392   464-530   Tachycitin  
  0.00000000000994   277-338   Tachycitin  
  0.000000000102   77-134   Antifungal peptide scarabaecin  
  0.0000000471   736-792   Antifungal peptide scarabaecin  
  0.00994   820-877   Tachycitin  
Aech_17725   0.0000000000497   513-568   Tachycitin  
 
Weak hits:
Aech_01906   0.0523   2-20   Tachycitin  
Aech_06289   0.0011   2-44   Tachycitin  

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View all assignments containing a Invertebrate chitin-binding proteins domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   86395 86395
No Yes Homo sapiens 76_38 Human 9 9
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 5 5
No Yes Otolemur garnettii 76_3 Small-eared galago 5 5
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 3 3
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 5 5
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 2 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6 6
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0   3 3
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 76_2.0 Green anole 4 4
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4
No Yes Latimeria chalumnae 76_1 Coelacanth 4 4
No Yes Lepisosteus oculatus 76 Spotted gar 4 4
No Yes Gadus morhua 76_1 Atlantic cod 6 6
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 76_4 Torafugu 6 6
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 18 15
No Yes Oryzias latipes 76_1 Japanese medaka 6 6
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 4 4
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 8
No Yes Astyanax mexicanus 76 Mexican tetra 5 5
No Yes Danio rerio 76_9 Zebrafish 5 5
No Yes Oikopleura dioica   31 24
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 19 11
No Yes Ciona intestinalis 76 Vase tunicate 26 13
No Yes Adineta vaga   65 44
No Yes Octopus bimaculoides 280   147 81
No Yes Crassostrea gigas 22 Pacific oyster 153 76
No Yes Lottia gigantea Owl limpet 179 85
No Yes Helobdella robusta   18 16
No Yes Capitella sp. I   152 88
No Yes Danaus plexippus OGS1.0 Monarch butterfly 98 50
No Yes Heliconius melpomene Postman butterfly 125 48
No Yes Bombyx mori Domestic silkworm 94 50
No Yes Nasonia vitripennis Jewel wasp 62 38
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 130 67
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 108 48
No Yes Linepithema humile v1.1 Argentine ant 102 49
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 98 52
No Yes Solenopsis invicta v.2.2.3 Red fire ant 81 43
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 78 41
No Yes Atta cephalotes v1.1   103 46
No Yes Camponotus floridanus v3.3 Florida carpenter ant 94 47
No Yes Lucilia cuprina Australian sheep blowfly 290 93
No Yes Drosophila grimshawi 1.3   251 91
No Yes Drosophila willistoni 1.3   244 89
No Yes Drosophila pseudoobscura 2.13   230 90
No Yes Drosophila persimilis 1.3   206 82
No Yes Drosophila suzukii   251 81
No Yes Drosophila yakuba 1.3   299 106
No Yes Drosophila simulans 1.3   234 90
No Yes Drosophila sechellia 1.3   257 96
No Yes Drosophila melanogaster 76_5 Fruit fly 428 161
No Yes Drosophila erecta 1.3   261 96
No Yes Drosophila ananassae 1.3   259 96
No Yes Drosophila virilis 1.2   239 83
No Yes Drosophila mojavensis 1.3   256 92
No Yes Megaselia scalaris 22   60 38
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 303 134
No Yes Culex pipiens quinquefasciatus Southern house mosquito 319 138
No Yes Anopheles darlingi 22 American malaria mosquito 187 61
No Yes Anopheles gambiae 49_3j African malaria mosquito 238 82
No Yes Tribolium castaneum 3.0 Red flour beetle 123 53
No Yes Pediculus humanus corporis (Early assembly) Human body louse 76 37
No Yes Acyrthosiphon pisum Pea aphid 52 27
No Yes Rhodnius prolixus 22   83 46
No Yes Daphnia pulex Common water flea 191 107
No Yes Strigamia maritima 22   101 59
No Yes Sarcoptes scabiei   43 32
No Yes Tetranychus urticae Two-spotted spider mite 55 42
No Yes Ixodes scapularis (Preliminary) Black-legged tick 72 47
No Yes Pristionchus pacificus   64 17
No Yes Meloidogyne incognita Southern root-knot nematode 8 3
No Yes Meloidogyne hapla   18 4
No Yes Onchocerca volvulus 22   36 11
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 62 21
No Yes Caenorhabditis japonica   42 10
No Yes Caenorhabditis brenneri   73 23
No Yes Caenorhabditis remanei   49 13
No Yes Caenorhabditis elegans 76_235 Roundworm 64 22
No Yes Caenorhabditis briggsae 2   60 13
No Yes Trichinella spiralis 22   40 16
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   10 7
No Yes Nematostella vectensis 1.0 Starlet sea anemone 31 17
No Yes Hydra vulgaris   43 15
No Yes Mucor circinelloides   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   2 2
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Albugo laibachii 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Thalassiosira pseudonana CCMP1335   34 23
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 10 10
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 339 125
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 265 90
No Yes Ascaris suum Victoria/Ghent Pig roundworm 102 20
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 47 15
No Yes Aspergillus fumigatus A1163   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 10 10
No Yes Homo sapiens (NCBI version) Human 3 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Heliconius numata (Incomplete)   104 63
No Yes Loa loa v3.3 (Request) Eye worm 39 13
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 41 15
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 31 7
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 4 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 6 6
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Gadus morhua 69_1 Atlantic cod 6 6
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 10 9
No Yes Oryzias latipes 69_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 4 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 5 5
No Yes Danio rerio 69_9 Zebrafish 4 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 15 9
No Yes Ciona intestinalis 69 Vase tunicate 25 12
No Yes Drosophila melanogaster 69_5 Fruit fly 284 100
No Yes Caenorhabditis elegans 69_215 Roundworm 44 12
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   3 3
No Yes NCBI 2017_08 genome   26250 11984
No Yes STRING v9.0.5 (STRING)   3710 1499
No Yes Uniprot 2018_03 genome   38670 18130
No Yes Global Ocean Sampling Expedition (GOS)   7 5
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   216 198
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   22 22
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12
No Yes TargetDB (Targets)   42 10
No Yes UniProt viral sequences (Viral)   191 176

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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