Ribonuclease H-like superfamily domain assignments
in
Protein Data Bank

Assignment details

Protein Data Bank (all PDB sequenc) has 2302 significant domains in 2270 proteins.

     

Sequence ID	Evalue	Region	Family
1a5v_A	7.88e-36	2-149	Retroviral integrase, catalytic domain
1a5w_A	7.88e-36	2-149	Retroviral integrase, catalytic domain
1a5x_A	7.88e-36	2-149	Retroviral integrase, catalytic domain
1asu_A	1.29e-36	1-153	Retroviral integrase, catalytic domain
1asv_A	1.29e-36	1-153	Retroviral integrase, catalytic domain
1asw_A	1.29e-36	1-153	Retroviral integrase, catalytic domain
1b7e_A	3.35e-115	3-417	Transposase inhibitor (Tn5 transposase)
1b92_A	6.94e-80	7-160	Retroviral integrase, catalytic domain
1b9d_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
1b9f_A	9.31e-79	7-160	Retroviral integrase, catalytic domain
1bcm_A	9.82e-78	12-232	mu transposase, core domain
1bcm_B	9.82e-78	12-232	mu transposase, core domain
1bco_A	9.82e-78	12-232	mu transposase, core domain
1bgx_T	2.09e-38	295-378	DnaQ-like 3'-5' exonuclease
1bhl_A	7.88e-80	2-150	Retroviral integrase, catalytic domain
1bi4_A	7.88e-81	7-160	Retroviral integrase, catalytic domain
1bi4_B	1.72e-80	7-160	Retroviral integrase, catalytic domain
1bi4_C	7.88e-81	7-160	Retroviral integrase, catalytic domain
1bis_A	5.3e-79	10-163	Retroviral integrase, catalytic domain
1bis_B	5.3e-79	10-163	Retroviral integrase, catalytic domain
1biu_A	7.88e-79	10-163	Retroviral integrase, catalytic domain
1biu_B	7.88e-79	10-163	Retroviral integrase, catalytic domain
1biu_C	7.88e-79	10-163	Retroviral integrase, catalytic domain
1biz_A	3.79e-80	11-163	Retroviral integrase, catalytic domain
1biz_B	3.79e-80	11-163	Retroviral integrase, catalytic domain
1bl3_A	7.88e-81	7-160	Retroviral integrase, catalytic domain
1bl3_B	7.88e-81	7-160	Retroviral integrase, catalytic domain
1bl3_C	7.88e-81	7-160	Retroviral integrase, catalytic domain
1bqm_A	4.03e-40	437-556	Ribonuclease H
1bqn_A	3.22e-39	437-556	Ribonuclease H
1c0m_A	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c0m_B	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c0m_C	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c0m_D	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c0t_A	9.8e-39	437-556	Ribonuclease H
1c0u_A	9.8e-39	437-556	Ribonuclease H
1c1a_A	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c1a_B	4.73e-37	3-160	Retroviral integrase, catalytic domain
1c1b_A	9.8e-39	437-556	Ribonuclease H
1c1c_A	9.8e-39	437-556	Ribonuclease H
1c6v_A	6.8e-67	8-158	Retroviral integrase, catalytic domain
1c6v_B	6.8e-67	8-158	Retroviral integrase, catalytic domain
1c6v_C	6.8e-67	8-158	Retroviral integrase, catalytic domain
1c6v_D	6.8e-67	8-158	Retroviral integrase, catalytic domain
1clq_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
1cxq_A	6.16e-36	5-153	Retroviral integrase, catalytic domain
1cxu_A	6.16e-36	5-153	Retroviral integrase, catalytic domain
1cz9_A	9.31e-35	5-153	Retroviral integrase, catalytic domain
1czb_A	6.16e-36	5-153	Retroviral integrase, catalytic domain
1d5a_A	7.25e-90	1-346	DnaQ-like 3'-5' exonuclease
1d8y_A	2.88e-54	2-195	DnaQ-like 3'-5' exonuclease
1d9d_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1d9f_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1dlo_A	4.03e-40	437-556	Ribonuclease H
1dpi_A	5.01e-57	3-195	DnaQ-like 3'-5' exonuclease
1dtq_A	9.8e-39	437-556	Ribonuclease H
1dtt_A	9.8e-39	437-556	Ribonuclease H
1eet_A	5.1e-38	437-556	Ribonuclease H
1eke_A	8.25e-62	1-223	Ribonuclease H
1eke_B	8.25e-62	1-223	Ribonuclease H
1ep4_A	9.8e-39	437-556	Ribonuclease H
1ex4_A	2.72e-77	8-160	Retroviral integrase, catalytic domain
1ex4_B	2.72e-77	8-160	Retroviral integrase, catalytic domain
1exq_A	6.01e-78	2-154	Retroviral integrase, catalytic domain
1exq_B	6.01e-78	2-154	Retroviral integrase, catalytic domain
1f21_A	2.65e-92	3-141	Ribonuclease H
1fk9_A	2.7e-31	424-542	Ribonuclease H
1fko_A	2.7e-31	424-542	Ribonuclease H
1fkp_A	2.7e-31	424-542	Ribonuclease H
1fxx_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
1g15_A	1.18e-91	3-141	Ribonuclease H
1goa_A	1.58e-94	3-142	Ribonuclease H
1gob_A	2.86e-95	3-141	Ribonuclease H
1goc_A	2.36e-94	3-142	Ribonuclease H
1hjr_A	1.42e-83	2-151	RuvC resolvase
1hjr_B	1.42e-83	2-151	RuvC resolvase
1hjr_C	1.42e-83	2-151	RuvC resolvase
1hjr_D	1.42e-83	2-151	RuvC resolvase
1hmv_A	4.03e-40	437-556	Ribonuclease H
1hmv_C	4.03e-40	437-556	Ribonuclease H
1hmv_E	4.03e-40	437-556	Ribonuclease H
1hmv_G	4.03e-40	437-556	Ribonuclease H
1hni_A	4.03e-40	437-556	Ribonuclease H
1hnv_A	4.03e-40	437-556	Ribonuclease H
1hpz_A	4.03e-40	437-556	Ribonuclease H
1hqe_A	4.03e-40	437-556	Ribonuclease H
1hqu_A	4.03e-40	437-556	Ribonuclease H
1hrh_A	1.21e-41	11-130	Ribonuclease H
1hrh_B	1.21e-41	11-130	Ribonuclease H
1hvu_A	5.1e-39	437-553	Ribonuclease H
1hvu_D	5.1e-39	437-553	Ribonuclease H
1hvu_G	5.1e-39	437-553	Ribonuclease H
1hvu_J	5.1e-39	437-553	Ribonuclease H
1hys_A	8.86e-39	437-552	Ribonuclease H
1hyv_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
1hyz_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
1i39_A	6.7e-51	21-219	Ribonuclease H
1i3a_A	6.7e-51	21-219	Ribonuclease H
1ig9_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
1ih7_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
1ikv_A	5.1e-38	437-556	Ribonuclease H
1ikw_A	5.1e-38	437-556	Ribonuclease H
1ikx_A	5.1e-38	437-556	Ribonuclease H
1iky_A	5.1e-38	437-556	Ribonuclease H
1io2_A	2.71e-58	2-209	Ribonuclease H
1itg_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
1iv0_A	1.61e-19	2-97	Putative Holliday junction resolvase RuvX
1j53_A	7.12e-88	9-184	DnaQ-like 3'-5' exonuclease
1j54_A	7.12e-88	9-184	DnaQ-like 3'-5' exonuclease
1j5o_A	4.03e-40	437-556	Ribonuclease H
1j9a_A	5.48e-72	8-180	DnaQ-like 3'-5' exonuclease
1jkh_A	9.8e-39	437-556	Ribonuclease H
1jl1_A	6.45e-89	3-141	Ribonuclease H
1jl2_A	1.18e-85	3-142	Ribonuclease H
1jl2_B	1.18e-85	3-142	Ribonuclease H
1jl2_C	1.18e-85	3-142	Ribonuclease H
1jl2_D	1.18e-85	3-142	Ribonuclease H
1jla_A	9.8e-39	437-556	Ribonuclease H
1jlb_A	9.8e-39	437-556	Ribonuclease H
1jlc_A	9.8e-39	437-556	Ribonuclease H
1jle_A	9.8e-39	437-556	Ribonuclease H
1jlf_A	9.8e-39	437-556	Ribonuclease H
1jlg_A	9.8e-39	437-556	Ribonuclease H
1jlq_A	9.8e-39	437-556	Ribonuclease H
1jxb_A	1.04e-90	3-141	Ribonuclease H
1jxe_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
1k6y_A	1.72e-77	56-209	Retroviral integrase, catalytic domain
1k6y_B	1.72e-77	56-209	Retroviral integrase, catalytic domain
1k6y_C	1.72e-77	56-209	Retroviral integrase, catalytic domain
1k6y_D	1.72e-77	56-209	Retroviral integrase, catalytic domain
1kcf_A	1.71e-69	40-255	Mitochondrial resolvase ydc2 catalytic domain
1kcf_B	1.71e-69	40-255	Mitochondrial resolvase ydc2 catalytic domain
1kfd_A	5.01e-57	3-195	DnaQ-like 3'-5' exonuclease
1kfs_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1klm_A	9.8e-39	437-556	Ribonuclease H
1kln_A	1.59e-55	3-195	DnaQ-like 3'-5' exonuclease
1krp_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1ksp_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1ktq_A	7.89e-39	6-89	DnaQ-like 3'-5' exonuclease
1kva_A	1.97e-91	3-141	Ribonuclease H
1kvb_A	2.11e-93	3-141	Ribonuclease H
1kvc_A	3.26e-93	3-141	Ribonuclease H
1l3s_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1l3t_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1l3u_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1l3v_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1l5u_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1lav_A	7.88e-95	3-141	Ribonuclease H
1law_A	1.9e-94	3-141	Ribonuclease H
1lv5_A	5.28e-39	8-171	DnaQ-like 3'-5' exonuclease
1lv5_B	5.28e-39	8-171	DnaQ-like 3'-5' exonuclease
1lw0_A	9.8e-39	437-556	Ribonuclease H
1lw2_A	9.8e-39	437-556	Ribonuclease H
1lwc_A	9.8e-39	437-556	Ribonuclease H
1lwe_A	9.8e-39	437-556	Ribonuclease H
1lwf_A	9.8e-39	437-556	Ribonuclease H
1mm8_A	2.06e-130	11-478	Transposase inhibitor (Tn5 transposase)
1mu2_A	3.82e-37	424-555	Ribonuclease H
1muh_A	5.54e-130	11-478	Transposase inhibitor (Tn5 transposase)
1mus_A	2.25e-130	7-474	Transposase inhibitor (Tn5 transposase)
1n5y_A	4.03e-40	437-556	Ribonuclease H
1n6q_A	4.03e-40	437-556	Ribonuclease H
1njw_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1njx_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1njy_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1njz_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk0_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk4_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk5_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk6_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk7_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk8_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nk9_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nkb_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nkc_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nke_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1nmn_A	1.03e-43	3-136	Putative Holliday junction resolvase RuvX
1nmn_B	1.03e-43	3-136	Putative Holliday junction resolvase RuvX
1noy_A	1.42e-78	3-371	DnaQ-like 3'-5' exonuclease
1noy_B	1.42e-78	3-371	DnaQ-like 3'-5' exonuclease
1noz_A	1.42e-78	3-371	DnaQ-like 3'-5' exonuclease
1noz_B	1.42e-78	3-371	DnaQ-like 3'-5' exonuclease
1nu0_A	1.42e-43	3-136	Putative Holliday junction resolvase RuvX
1nu0_B	1.42e-43	3-136	Putative Holliday junction resolvase RuvX
1o1w_A	3.22e-40	15-134	Ribonuclease H
1ovq_A	1.03e-43	3-136	Putative Holliday junction resolvase RuvX
1q8i_A	2.89e-98	3-389	DnaQ-like 3'-5' exonuclease
1q9x_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
1q9x_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
1q9x_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
1q9x_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
1q9y_A	1.87e-71	7-378	DnaQ-like 3'-5' exonuclease
1qe1_A	4.03e-40	437-556	Ribonuclease H
1qht_A	1.49e-85	1-347	DnaQ-like 3'-5' exonuclease
1qqc_A	1.97e-90	1-346	DnaQ-like 3'-5' exonuclease
1qs4_A	5.87e-79	1-154	Retroviral integrase, catalytic domain
1qs4_B	5.87e-79	1-154	Retroviral integrase, catalytic domain
1qs4_C	5.87e-79	1-154	Retroviral integrase, catalytic domain
1qsl_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
1qss_A	3.99e-38	3-86	DnaQ-like 3'-5' exonuclease
1qsy_A	3.99e-38	3-86	DnaQ-like 3'-5' exonuclease
1qtm_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
1r0a_A	4.03e-40	437-556	Ribonuclease H
1rbr_A	2.65e-96	3-141	Ribonuclease H
1rbs_A	6.45e-95	3-141	Ribonuclease H
1rbt_A	1.25e-95	3-141	Ribonuclease H
1rbu_A	7.16e-95	3-141	Ribonuclease H
1rbv_A	1.75e-93	3-141	Ribonuclease H
1rch_A	1.93e-95	3-141	Ribonuclease H
1rda_A	7.52e-93	3-141	Ribonuclease H
1rdb_A	2.33e-93	3-141	Ribonuclease H
1rdc_A	4.3e-93	3-141	Ribonuclease H
1rdd_A	1.93e-95	3-141	Ribonuclease H
1rdh_A	1.57e-41	23-142	Ribonuclease H
1rdh_B	1.57e-41	23-142	Ribonuclease H
1rev_A	9.8e-39	437-556	Ribonuclease H
1ril_A	2.15e-81	11-146	Ribonuclease H
1rnh_A	1.93e-95	3-141	Ribonuclease H
1rt1_A	9.8e-39	437-556	Ribonuclease H
1rt2_A	9.8e-39	437-556	Ribonuclease H
1rt3_A	9.8e-39	437-556	Ribonuclease H
1rt4_A	9.8e-39	437-556	Ribonuclease H
1rt5_A	9.8e-39	437-556	Ribonuclease H
1rt6_A	9.8e-39	437-556	Ribonuclease H
1rt7_A	9.8e-39	437-556	Ribonuclease H
1rtd_A	1.99e-35	437-553	Ribonuclease H
1rtd_C	1.99e-35	437-553	Ribonuclease H
1rth_A	9.8e-39	437-556	Ribonuclease H
1rti_A	9.8e-39	437-556	Ribonuclease H
1rtj_A	9.8e-39	437-556	Ribonuclease H
1s1t_A	9.8e-39	437-556	Ribonuclease H
1s1u_A	9.8e-39	437-556	Ribonuclease H
1s1v_A	9.8e-39	437-556	Ribonuclease H
1s1w_A	9.8e-39	437-556	Ribonuclease H
1s1x_A	9.8e-39	437-556	Ribonuclease H
1s5j_A	1.85e-83	8-412	DnaQ-like 3'-5' exonuclease
1s6p_A	4.03e-40	437-556	Ribonuclease H
1s6q_A	4.03e-40	437-556	Ribonuclease H
1s9e_A	4.03e-40	437-556	Ribonuclease H
1s9g_A	4.03e-40	437-556	Ribonuclease H
1skr_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1sks_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1skw_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1sl0_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1sl0_C	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1sl1_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1sl2_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1suq_A	4.03e-40	437-556	Ribonuclease H
1sv5_A	4.03e-40	437-556	Ribonuclease H
1t03_A	4.03e-40	437-556	Ribonuclease H
1t05_A	4.03e-40	437-556	Ribonuclease H
1t7p_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1t8e_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1taq_A	2.09e-38	295-378	DnaQ-like 3'-5' exonuclease
1tau_A	2.09e-38	295-378	DnaQ-like 3'-5' exonuclease
1tgo_A	8.75e-90	1-346	DnaQ-like 3'-5' exonuclease
1tk0_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1tk5_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1tk8_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1tkd_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1tkt_A	9.8e-39	437-556	Ribonuclease H
1tkx_A	9.8e-39	437-556	Ribonuclease H
1tkz_A	9.8e-39	437-556	Ribonuclease H
1tl1_A	9.8e-39	437-556	Ribonuclease H
1tl3_A	9.8e-39	437-556	Ribonuclease H
1tv6_A	4.03e-40	437-556	Ribonuclease H
1tvr_A	4.03e-40	437-556	Ribonuclease H
1u04_A	1.61e-100	326-771	PIWI domain
1u45_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1u47_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1u48_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1u49_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1u4b_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1ua0_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1ua1_A	1.93e-39	8-171	DnaQ-like 3'-5' exonuclease
1uax_A	5.03e-60	2-208	Ribonuclease H
1uax_B	5.03e-60	2-208	Ribonuclease H
1uoc_A	2.29e-82	6-286	CAF1-like ribonuclease
1uoc_B	2.29e-82	6-286	CAF1-like ribonuclease
1uwb_A	4.03e-40	437-556	Ribonuclease H
1vhx_A	2.25e-44	4-140	Putative Holliday junction resolvase RuvX
1vhx_B	2.25e-44	4-140	Putative Holliday junction resolvase RuvX
1vk0_A	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vk0_B	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vk0_C	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vk0_D	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vk0_E	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vk0_F	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
1vrt_A	9.8e-39	437-556	Ribonuclease H
1vru_A	9.8e-39	437-556	Ribonuclease H
1vsd_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vse_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vsf_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vsh_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vsi_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vsj_A	1.5e-35	5-149	Retroviral integrase, catalytic domain
1vsk_A	4.15e-34	3-145	Retroviral integrase, catalytic domain
1vsl_A	4.15e-34	3-145	Retroviral integrase, catalytic domain
1vsm_A	2.72e-35	3-145	Retroviral integrase, catalytic domain
1w0h_A	1.25e-50	11-194	DnaQ-like 3'-5' exonuclease
1w9h_A	6.12e-64	2-427	PIWI domain
1waf_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
1waf_B	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
1waj_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
1wlj_A	1.44e-36	7-174	DnaQ-like 3'-5' exonuclease
1wn7_A	9.86e-91	1-347	DnaQ-like 3'-5' exonuclease
1wns_A	1.1e-90	1-347	DnaQ-like 3'-5' exonuclease
1wse_A	5.01e-92	3-141	Ribonuclease H
1wse_B	5.01e-92	3-141	Ribonuclease H
1wsf_A	8.95e-91	3-141	Ribonuclease H
1wsf_B	8.95e-91	3-141	Ribonuclease H
1wsf_C	8.95e-91	3-141	Ribonuclease H
1wsf_D	8.95e-91	3-141	Ribonuclease H
1wsg_A	8.59e-90	3-141	Ribonuclease H
1wsg_B	8.59e-90	3-141	Ribonuclease H
1wsg_C	8.59e-90	3-141	Ribonuclease H
1wsg_D	8.59e-90	3-141	Ribonuclease H
1wsh_A	5.01e-92	3-141	Ribonuclease H
1wsh_B	5.01e-92	3-141	Ribonuclease H
1wsh_C	5.01e-92	3-141	Ribonuclease H
1wsh_D	5.01e-92	3-141	Ribonuclease H
1wsi_A	8.59e-90	3-141	Ribonuclease H
1wsi_B	8.59e-90	3-141	Ribonuclease H
1wsi_C	8.59e-90	3-141	Ribonuclease H
1wsi_D	8.59e-90	3-141	Ribonuclease H
1wsj_A	1e-91	5-141	Ribonuclease H
1wsj_B	1e-91	5-141	Ribonuclease H
1wsj_C	1e-91	5-141	Ribonuclease H
1wsj_D	1e-91	5-141	Ribonuclease H
1wsj_E	1e-91	5-141	Ribonuclease H
1wsj_F	1e-91	5-141	Ribonuclease H
1wsj_G	1e-91	5-141	Ribonuclease H
1wsj_H	1e-91	5-141	Ribonuclease H
1x1p_A	4.51e-54	2-196	Ribonuclease H
1x9m_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1x9s_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1x9w_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
1xc9_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1xhx_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhx_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhx_C	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhx_D	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhz_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhz_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhz_C	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xhz_D	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xi1_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xi1_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
1xwl_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
1y97_A	7.4e-56	5-229	DnaQ-like 3'-5' exonuclease
1y97_B	7.4e-56	5-229	DnaQ-like 3'-5' exonuclease
1yt3_A	1.37e-67	1-210	DnaQ-like 3'-5' exonuclease
1yta_A	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
1yta_B	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
1yta_C	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
1yta_D	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
1ytu_A	6.12e-64	2-427	PIWI domain
1ytu_B	6.12e-64	2-427	PIWI domain
1yvu_A	1.13e-79	334-706	PIWI domain
1z25_A	1.61e-100	326-771	PIWI domain
1z26_A	1.61e-100	326-771	PIWI domain
1zbf_A	1.72e-30	11-138	Ribonuclease H
1zbh_A	3.22e-44	79-262	DnaQ-like 3'-5' exonuclease
1zbh_B	3.22e-44	79-262	DnaQ-like 3'-5' exonuclease
1zbh_C	3.22e-44	79-262	DnaQ-like 3'-5' exonuclease
1zbh_D	3.22e-44	79-262	DnaQ-like 3'-5' exonuclease
1zbi_A	1.72e-30	11-138	Ribonuclease H
1zbi_B	1.72e-30	11-138	Ribonuclease H
1zbl_A	2.18e-31	11-138	Ribonuclease H
1zbl_B	2.18e-31	11-138	Ribonuclease H
1zbu_A	1.2e-48	129-312	DnaQ-like 3'-5' exonuclease
1zbu_B	1.2e-48	129-312	DnaQ-like 3'-5' exonuclease
1zbu_C	1.2e-48	129-312	DnaQ-like 3'-5' exonuclease
1zbu_D	1.2e-48	129-312	DnaQ-like 3'-5' exonuclease
1zup_A	3.93e-93	13-313	TM1739-like
1zup_B	3.93e-93	13-313	TM1739-like
1zyq_A	1.58e-52	1-200	DnaQ-like 3'-5' exonuclease
2a1r_A	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2a1r_B	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2a1s_A	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2a1s_B	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2a1s_C	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2a1s_D	9.99e-67	1-134,266-403	CAF1-like ribonuclease
2ajq_A	4.19e-50	11-206	DnaQ-like 3'-5' exonuclease
2ajq_F	4.19e-50	11-206	DnaQ-like 3'-5' exonuclease
2atq_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2b4j_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
2b4j_B	2.22e-80	10-163	Retroviral integrase, catalytic domain
2b5j_A	4.03e-40	437-556	Ribonuclease H
2b6a_A	4.03e-40	437-556	Ribonuclease H
2ban_A	4.03e-40	437-556	Ribonuclease H
2bdp_A	3.74e-39	8-171	DnaQ-like 3'-5' exonuclease
2be2_A	4.03e-40	437-556	Ribonuclease H
2bgg_A	6.12e-64	2-427	PIWI domain
2bgg_B	6.12e-64	2-427	PIWI domain
2bw3_A	9.66e-73	90-531	Hermes transposase-like
2d0a_A	2.71e-48	93-304	Ribonuclease H
2d0b_A	2.71e-48	93-304	Ribonuclease H
2d0c_A	2.71e-48	93-304	Ribonuclease H
2d5r_A	2.33e-98	2-252	CAF1-like ribonuclease
2dfe_A	4.9e-58	2-207	Ribonuclease H
2dff_A	5.15e-58	2-207	Ribonuclease H
2dfh_A	3.22e-58	2-209	Ribonuclease H
2dtu_A	1.68e-68	4-368	DnaQ-like 3'-5' exonuclease
2dtu_B	1.68e-68	4-368	DnaQ-like 3'-5' exonuclease
2dtu_C	1.68e-68	4-368	DnaQ-like 3'-5' exonuclease
2dtu_D	1.68e-68	4-368	DnaQ-like 3'-5' exonuclease
2dy4_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2dy4_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2dy4_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2dy4_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2e4l_A	6.45e-88	5-144	Ribonuclease H
2e6l_A	2.19e-39	35-191	DnaQ-like 3'-5' exonuclease
2e6m_A	2.19e-39	35-191	DnaQ-like 3'-5' exonuclease
2ehg_A	1.68e-33	5-130	SCOPe
2etj_A	2.71e-68	18-211	Ribonuclease H
2ex3_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2ex3_C	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2ex3_E	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2ex3_G	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2ex3_I	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2ex3_K	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2f8s_A	1.13e-79	334-706	PIWI domain
2f8s_B	1.13e-79	334-706	PIWI domain
2f8t_A	1.13e-79	334-706	PIWI domain
2f8t_B	1.13e-79	334-706	PIWI domain
2f96_A	1.09e-66	31-218	DnaQ-like 3'-5' exonuclease
2f96_B	1.09e-66	31-218	DnaQ-like 3'-5' exonuclease
2fbt_A	2.9e-40	41-196	DnaQ-like 3'-5' exonuclease
2fbv_A	2.9e-40	41-196	DnaQ-like 3'-5' exonuclease
2fbx_A	2.9e-40	41-196	DnaQ-like 3'-5' exonuclease
2fby_A	2.9e-40	41-196	DnaQ-like 3'-5' exonuclease
2fc0_A	2.9e-40	41-196	DnaQ-like 3'-5' exonuclease
2g8f_A	6.45e-31	11-138	Ribonuclease H
2g8h_A	2.36e-31	11-138	Ribonuclease H
2g8i_A	2.36e-31	11-138	Ribonuclease H
2g8k_A	2.36e-31	11-138	Ribonuclease H
2g8u_A	1.72e-30	11-138	Ribonuclease H
2g8v_A	6.45e-31	11-138	Ribonuclease H
2g8w_A	6.45e-31	11-138	Ribonuclease H
2gbz_A	6.02e-68	9-179	SCOPe
2gui_A	8.45e-88	12-187	DnaQ-like 3'-5' exonuclease
2gv9_A	2.23e-81	128-273,317-572	SCOPe
2gv9_B	2.23e-81	128-273,317-572	SCOPe
2hb5_A	2.33e-46	24-153	SCOPe
2hbj_A	1.53e-93	4-283	DnaQ-like 3'-5' exonuclease
2hbk_A	1.53e-93	4-283	DnaQ-like 3'-5' exonuclease
2hbl_A	1.53e-93	4-283	DnaQ-like 3'-5' exonuclease
2hbm_A	1.53e-93	4-283	DnaQ-like 3'-5' exonuclease
2hhq_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhs_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hht_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhu_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhv_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhw_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhw_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hhx_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hmi_A	4.03e-40	437-556	Ribonuclease H
2hnd_A	1.83e-27	421-534	Ribonuclease H
2hny_A	1.83e-27	421-534	Ribonuclease H
2hnz_A	1.83e-27	421-534	Ribonuclease H
2hvh_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hvh_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hvi_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hvi_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2hw3_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
2i5j_A	1.61e-38	437-552	Ribonuclease H
2iaj_A	4.03e-40	437-556	Ribonuclease H
2ic3_A	4.03e-40	437-556	Ribonuclease H
2ido_A	7.12e-88	9-184	DnaQ-like 3'-5' exonuclease
2ido_C	7.12e-88	9-184	DnaQ-like 3'-5' exonuclease
2igi_A	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
2igi_B	1.29e-76	5-178	DnaQ-like 3'-5' exonuclease
2ioc_A	2.5e-53	10-233	DnaQ-like 3'-5' exonuclease
2ioc_B	2.5e-53	10-233	DnaQ-like 3'-5' exonuclease
2is3_A	7.22e-71	18-206	DnaQ-like 3'-5' exonuclease
2is3_B	7.22e-71	18-206	DnaQ-like 3'-5' exonuclease
2is3_C	7.22e-71	18-206	DnaQ-like 3'-5' exonuclease
2is3_D	7.22e-71	18-206	DnaQ-like 3'-5' exonuclease
2itg_A	8.59e-81	7-160	Retroviral integrase, catalytic domain
2jgu_A	2.35e-92	1-347	SCOPe
2jle_A	9.8e-39	437-556	Ribonuclease H
2jle_B	9.8e-39	437-556	Ribonuclease H
2kfn_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
2kfz_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
2kq2_A	4.17e-19	8-137	Ribonuclease H
2ktq_A	6.44e-39	1-84	DnaQ-like 3'-5' exonuclease
2kw4_A	4.17e-19	8-137	Ribonuclease H
2kzm_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
2kzz_A	3.44e-57	2-195	DnaQ-like 3'-5' exonuclease
2lsn_A	1.18e-29	11-160	Ribonuclease H
2nub_A	1.13e-79	334-706	PIWI domain
2o4g_A	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
2o4g_B	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
2o4g_C	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
2o4g_D	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
2o4i_A	1.35e-51	12-235	DnaQ-like 3'-5' exonuclease
2o4i_B	1.35e-51	12-235	DnaQ-like 3'-5' exonuclease
2oa8_A	2.08e-53	7-230	DnaQ-like 3'-5' exonuclease
2oa8_B	2.08e-53	7-230	DnaQ-like 3'-5' exonuclease
2oce_A	6.44e-53	326-474	Tex RuvX-like domain-like
2opp_A	8.25e-33	421-542	Ribonuclease H
2opq_A	1.83e-27	421-534	Ribonuclease H
2opr_A	2.22e-34	436-547	Ribonuclease H
2ops_A	2.7e-31	423-541	Ribonuclease H
2oyq_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2oyq_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2oyq_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2oyq_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2ozm_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2ozs_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p1j_A	1.11e-82	13-175	DnaQ-like 3'-5' exonuclease
2p1j_B	1.11e-82	13-175	DnaQ-like 3'-5' exonuclease
2p51_A	3.52e-89	22-269	SCOPe
2p5g_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5g_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5g_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5g_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5o_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5o_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5o_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2p5o_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
2py5_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2py5_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pyj_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pyj_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pyl_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pzs_A	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pzs_B	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pzs_C	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2pzs_D	3.41e-50	6-184	DnaQ-like 3'-5' exonuclease
2q3s_A	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2q3s_B	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2q3s_C	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2q3s_D	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2q3s_E	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2q3s_F	6.28e-51	3-204	DnaQ-like 3'-5' exonuclease
2qk9_A	6.09e-70	8-149	SCOPe
2qkb_A	6.09e-70	8-149	SCOPe
2qkb_B	6.09e-70	8-149	SCOPe
2qkk_A	6.09e-70	8-149	SCOPe
2qkk_B	6.09e-70	8-149	SCOPe
2qkk_E	6.09e-70	8-149	SCOPe
2qkk_F	6.09e-70	8-149	SCOPe
2qkk_I	6.09e-70	8-149	SCOPe
2qkk_J	6.09e-70	8-149	SCOPe
2qkk_M	6.09e-70	8-149	SCOPe
2qkk_N	6.09e-70	8-149	SCOPe
2qkk_R	6.09e-70	8-149	SCOPe
2qkk_S	6.09e-70	8-149	SCOPe
2qkk_W	6.09e-70	8-149	SCOPe
2qxf_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
2r7y_A	1.29e-30	4-131	Ribonuclease H
2rf2_A	9.8e-39	440-559	Ribonuclease H
2rki_A	9.8e-39	437-556	Ribonuclease H
2rn2_A	1.93e-95	3-141	Ribonuclease H
2rpi_A	3.12e-47	23-106	Ribonuclease H
	0.0000129	5-24	Ribonuclease H
2vg5_A	4.03e-40	437-556	Ribonuclease H
2vg6_A	4.03e-40	437-556	Ribonuclease H
2vg7_A	4.03e-40	437-556	Ribonuclease H
2vwj_A	2.78e-88	1-346	DnaQ-like 3'-5' exonuclease
2vwk_A	8.43e-88	1-346	DnaQ-like 3'-5' exonuclease
2w42_A	6.12e-64	2-427	PIWI domain
2w42_B	6.12e-64	2-427	PIWI domain
2wom_A	9.8e-39	437-556	Ribonuclease H
2won_A	9.8e-39	437-556	Ribonuclease H
2x6n_A	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6n_B	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6n_C	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6n_D	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6n_E	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6n_F	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_A	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_B	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_C	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_D	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_E	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x6s_F	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_A	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_B	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_C	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_D	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_E	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x74_F	1.79e-42	12-161	Retroviral integrase, catalytic domain
2x78_A	6.52e-43	12-161	Retroviral integrase, catalytic domain
2x78_B	6.52e-43	12-161	Retroviral integrase, catalytic domain
2x78_C	6.52e-43	12-161	Retroviral integrase, catalytic domain
2xdy_A	0.0000000106	77-144	PIWI domain
2xhb_A	4.51e-88	1-346	DnaQ-like 3'-5' exonuclease
2xo7_A	3.48e-39	8-171	DnaQ-like 3'-5' exonuclease
2xri_A	5.16e-39	32-207	DnaQ-like 3'-5' exonuclease
2xy5_A	3.48e-39	9-172	DnaQ-like 3'-5' exonuclease
2xy6_A	3.48e-39	9-172	DnaQ-like 3'-5' exonuclease
2xy7_A	8.38e-39	8-171	DnaQ-like 3'-5' exonuclease
2xy8_A	7.12e-88	9-184	DnaQ-like 3'-5' exonuclease
2y1i_A	6.06e-39	8-171	DnaQ-like 3'-5' exonuclease
2y1j_A	6.06e-39	8-171	DnaQ-like 3'-5' exonuclease
2yha_A	2.68e-84	150-387
2yhb_A	9.66e-122	150-436
2ykm_A	5.1e-38	437-556	Ribonuclease H
2ykn_A	5.1e-38	437-556	Ribonuclease H
2ynf_A	9.8e-39	440-559	Ribonuclease H
2yng_A	9.8e-39	440-559	Ribonuclease H
2ynh_A	9.8e-39	440-559	Ribonuclease H
2yni_A	9.8e-39	440-559	Ribonuclease H
2yv0_X	1.68e-93	3-141	Ribonuclease H
2z1g_A	7.88e-93	3-141	Ribonuclease H
2z1h_A	1.5e-94	3-141	Ribonuclease H
2z1i_A	3.26e-93	3-141	Ribonuclease H
2z1i_B	3.26e-93	3-141	Ribonuclease H
2z1j_A	3.26e-93	3-141	Ribonuclease H
2zd1_A	1.48e-39	439-557	Ribonuclease H
2ze2_A	1.48e-39	439-557	Ribonuclease H
2zqb_A	8.24e-90	5-144	Ribonuclease H
2zqb_B	8.24e-90	5-144	Ribonuclease H
2zqb_C	8.24e-90	5-144	Ribonuclease H
2zqb_D	8.24e-90	5-144	Ribonuclease H
3a2f_A	1.86e-92	1-347	SCOPe
3aa2_A	1.83e-95	3-141	Ribonuclease H
3aa3_A	1.32e-95	3-141	Ribonuclease H
3aa4_A	1.07e-95	3-141	Ribonuclease H
3aa5_X	7.16e-95	3-141	Ribonuclease H
3aly_A	1.43e-33	5-130	SCOPe
3aly_B	1.43e-33	5-130	SCOPe
3ao1_A	4.8e-78	8-160	Retroviral integrase, catalytic domain
3ao1_B	4.8e-78	8-160	Retroviral integrase, catalytic domain
3ao2_A	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao2_B	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao3_A	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao3_B	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao4_A	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao4_B	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao5_A	2.36e-77	8-160	Retroviral integrase, catalytic domain
3ao5_B	2.36e-77	8-160	Retroviral integrase, catalytic domain
3asm_A	2.71e-48	93-304	Ribonuclease H
3av9_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3av9_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3ava_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3ava_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avb_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avb_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avc_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avc_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avf_A	3.01e-79	28-180	Retroviral integrase, catalytic domain
3avf_B	3.01e-79	28-180	Retroviral integrase, catalytic domain
3avg_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avg_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avh_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avh_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avi_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avi_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avj_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avj_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avk_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avk_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avl_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avl_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avm_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avm_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avn_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3avn_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3b6o_A	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6o_B	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6o_C	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6o_D	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6p_A	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6p_B	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6p_C	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3b6p_D	2.7e-53	12-235	DnaQ-like 3'-5' exonuclease
3bdp_A	3.74e-39	8-171	DnaQ-like 3'-5' exonuclease
3bgr_A	1.48e-39	439-557	Ribonuclease H
3bzc_A	6.44e-53	325-473	Tex RuvX-like domain-like
3bzk_A	6.44e-53	325-473	Tex RuvX-like domain-like
3c6t_A	9.8e-39	440-559	Ribonuclease H
3c6u_A	9.8e-39	440-559	Ribonuclease H
3c94_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
3c95_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
3cfo_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
3cfp_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
3cfr_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
3cg7_A	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cg7_B	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cm5_A	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cm5_B	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cm6_A	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cm6_B	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
3cq8_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3cym_A	4.6e-45	6-211	DnaQ-like 3'-5' exonuclease
3d0p_A	1.4e-30	5-132	Ribonuclease H
3d0p_C	1.4e-30	5-132	Ribonuclease H
3d45_A	1.52e-65	3-136,261-398	CAF1-like ribonuclease
3d45_B	1.52e-65	3-136,261-398	CAF1-like ribonuclease
3di6_A	9.8e-39	437-556	Ribonuclease H
3dlb_A	2.9e-73	282-685	PIWI domain
3dlb_B	2.9e-73	282-685	PIWI domain
3dle_A	9.8e-39	437-556	Ribonuclease H
3dlg_A	9.8e-39	437-556	Ribonuclease H
3dlh_A	2.9e-73	282-685	PIWI domain
3dlh_B	2.9e-73	282-685	PIWI domain
3dlk_A	1.48e-39	438-556	Ribonuclease H
3dlr_A	5.8e-45	16-165	Retroviral integrase, catalytic domain
3dm2_A	9.8e-39	437-556	Ribonuclease H
3dmj_A	9.8e-39	437-556	Ribonuclease H
3dok_A	9.8e-39	437-556	Ribonuclease H
3dol_A	9.8e-39	437-556	Ribonuclease H
3drp_A	9.8e-39	440-559	Ribonuclease H
3drr_A	9.8e-39	440-559	Ribonuclease H
3drs_A	9.8e-39	440-559	Ribonuclease H
3dya_A	9.8e-39	437-556	Ribonuclease H
3e01_A	9.8e-39	437-556	Ribonuclease H
3e66_A	3.22e-212	19-265	Prp8 beta-finger domain-like
3e66_B	3.22e-212	19-265	Prp8 beta-finger domain-like
3e9l_A	1.8e-267	1-247	Prp8 beta-finger domain-like
3e9o_A	1.05e-208	7-249	Prp8 beta-finger domain-like
3e9p_A	2.58e-211	1-246	Prp8 beta-finger domain-like
3e9p_B	2.58e-211	1-246	Prp8 beta-finger domain-like
3ecp_A	5.41e-130	7-474	Transposase inhibitor (Tn5 transposase)
3enb_A	1.33e-238	1-222	Prp8 beta-finger domain-like
3enb_B	1.33e-238	1-222	Prp8 beta-finger domain-like
3ey1_A	1.54e-30	7-134	Ribonuclease H
3eyz_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
3ez5_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
3ez5_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
3f73_A	2.9e-73	282-685	PIWI domain
3f73_B	2.9e-73	282-685	PIWI domain
3f9k_A	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_B	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_E	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_F	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_I	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_J	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_M	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_N	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_Q	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_R	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_U	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_V	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_Y	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_Z	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_c	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_d	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_g	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_h	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_k	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_l	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_o	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_p	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_s	2.08e-66	58-208	Retroviral integrase, catalytic domain
3f9k_t	2.08e-66	58-208	Retroviral integrase, catalytic domain
3ffi_A	9.8e-39	438-557	Ribonuclease H
3g0z_A	3.52e-89	22-269	SCOPe
3g10_A	3.52e-89	22-269	SCOPe
3h08_A	7.16e-83	5-142	SCOPe
3h08_B	7.16e-83	5-142	SCOPe
3hjf_A	1.59e-72	282-685	PIWI domain
3hk2_A	1.61e-72	282-685	PIWI domain
3hk2_B	1.61e-72	282-685	PIWI domain
3hl8_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
3hm9_A	2.9e-73	282-685	PIWI domain
3ho1_A	2.09e-72	282-685	PIWI domain
3hp6_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
3hp6_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
3hp9_A	1.65e-135	9-474	DnaQ-like 3'-5' exonuclease
3hpg_A	2.72e-48	58-208	SCOPe
3hpg_B	2.72e-48	58-208	SCOPe
3hpg_C	2.72e-48	58-208	SCOPe
3hpg_D	2.72e-48	58-208	SCOPe
3hpg_E	2.72e-48	58-208	SCOPe
3hpg_F	2.72e-48	58-208	SCOPe
3hph_A	2.72e-48	58-208	SCOPe
3hph_B	2.72e-48	58-208	SCOPe
3hph_C	2.72e-48	58-208	SCOPe
3hph_D	2.72e-48	58-208	SCOPe
3hpo_A	5.28e-39	8-171	DnaQ-like 3'-5' exonuclease
3hst_B	6.45e-62	4-132	SCOPe
3hst_D	6.45e-62	4-132	SCOPe
3ht3_A	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
3ht3_D	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
3hvr_A	2.9e-73	282-685	PIWI domain
3hvr_B	2.9e-73	282-685	PIWI domain
3hvt_A	4.03e-40	437-556	Ribonuclease H
3hxm_A	2.9e-73	282-685	PIWI domain
3hyf_A	7.52e-62	12-145	Ribonuclease H
3i0r_A	9.8e-39	440-559	Ribonuclease H
3i0s_A	9.8e-39	440-559	Ribonuclease H
3i8d_A	1.29e-30	4-131	Ribonuclease H
3i8d_C	1.29e-30	4-131	Ribonuclease H
3iay_A	2.88e-103	64-486	DnaQ-like 3'-5' exonuclease
3ig1_A	1.48e-39	437-555	Ribonuclease H
3ikm_A	0.0000000000185	34-239,268-359	SCOPe
3ikm_D	0.0000000000185	34-239,268-359	SCOPe
3irx_A	1.48e-39	440-558	Ribonuclease H
3is9_A	1.48e-39	440-558	Ribonuclease H
3isn_C	5.1e-38	437-556	Ribonuclease H
3ith_A	5.1e-38	437-556	Ribonuclease H
3ith_C	5.1e-38	437-556	Ribonuclease H
3jb9_A	3.22e-231	1784-2030	Prp8 beta-finger domain-like
	3.86e-81	1021-1277	Prp8 beta-finger domain-like
3jca_A	1.65e-42	61-213	Retroviral integrase, catalytic domain
3jca_B	1.65e-42	61-213	Retroviral integrase, catalytic domain
3jca_E	1.65e-42	61-213	Retroviral integrase, catalytic domain
3jca_F	1.65e-42	61-213	Retroviral integrase, catalytic domain
3jcm_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
3jcr_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
3jsm_A	4.03e-40	437-556	Ribonuclease H
3jyt_A	4.03e-40	437-556	Ribonuclease H
3k2p_A	1.21e-41	13-132	Ribonuclease H
3k2p_B	1.21e-41	13-132	Ribonuclease H
3k57_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k58_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k59_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5l_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5m_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5n_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5n_B	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5o_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3k5o_B	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3kd1_E	2.15e-73	4-375	DnaQ-like 3'-5' exonuclease
3kd5_E	2.15e-73	4-375	DnaQ-like 3'-5' exonuclease
3kio_A	2.71e-58	29-248	Ribonuclease H
3kjv_A	9.8e-39	437-556	Ribonuclease H
3kk1_A	9.8e-39	437-556	Ribonuclease H
3kk2_A	9.8e-39	437-556	Ribonuclease H
3kk3_A	9.8e-39	437-556	Ribonuclease H
3kkr_A	1.07e-52	3-151	SCOPe
3kks_A	1.07e-52	3-151	SCOPe
3kks_B	1.07e-52	3-151	SCOPe
3kle_A	4.03e-40	439-558	Ribonuclease H
3kle_E	4.03e-40	439-558	Ribonuclease H
3kle_I	4.03e-40	439-558	Ribonuclease H
3kle_M	4.03e-40	439-558	Ribonuclease H
3klf_A	1.48e-39	439-557	Ribonuclease H
3klf_E	1.48e-39	439-557	Ribonuclease H
3klf_I	1.48e-39	439-557	Ribonuclease H
3klf_M	1.48e-39	439-557	Ribonuclease H
3klg_A	4.03e-40	439-558	Ribonuclease H
3klg_E	4.03e-40	439-558	Ribonuclease H
3klh_A	4.03e-40	439-558	Ribonuclease H
3kli_A	4.03e-40	439-558	Ribonuclease H
3ktq_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3l2q_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2q_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2r_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2r_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2u_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2u_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2v_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2v_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2w_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l2w_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3l3u_A	4.8e-78	8-160	Retroviral integrase, catalytic domain
3l3u_B	4.8e-78	8-160	Retroviral integrase, catalytic domain
3l3v_A	4.8e-78	8-160	Retroviral integrase, catalytic domain
3l3v_B	4.8e-78	8-160	Retroviral integrase, catalytic domain
3l8b_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3l8b_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3lak_A	9.8e-39	437-556	Ribonuclease H
3lak_B	9.8e-39	437-556	Ribonuclease H
3lal_A	9.8e-39	437-556	Ribonuclease H
3lal_B	9.8e-39	437-556	Ribonuclease H
3lam_A	9.8e-39	437-556	Ribonuclease H
3lam_B	9.8e-39	437-556	Ribonuclease H
3lan_A	9.8e-39	437-556	Ribonuclease H
3lan_B	9.8e-39	437-556	Ribonuclease H
3lds_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3lp0_A	9.8e-39	440-559	Ribonuclease H
3lp1_A	9.8e-39	440-559	Ribonuclease H
3lp2_A	9.8e-39	440-559	Ribonuclease H
3lp3_A	1.29e-41	13-132	Ribonuclease H
3lp3_B	1.29e-41	13-132	Ribonuclease H
3lpt_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
3lpu_A	2.22e-80	10-163	Retroviral integrase, catalytic domain
3lru_A	4.72e-165	1-160	Prp8 beta-finger domain-like
3lru_B	4.72e-165	1-160	Prp8 beta-finger domain-like
3luc_A	0.00000000000773	4-137	PIWI domain
3luc_B	0.00000000000773	4-137	PIWI domain
3luc_C	0.00000000000773	4-137	PIWI domain
3lud_A	0.00000000000773	4-137	PIWI domain
3lud_B	0.00000000000773	4-137	PIWI domain
3lud_C	0.00000000000773	4-137	PIWI domain
3lug_A	0.00000000000773	4-137	PIWI domain
3lug_B	0.00000000000773	4-137	PIWI domain
3lug_C	0.00000000000773	4-137	PIWI domain
3luh_A	0.00000000000773	4-137	PIWI domain
3luh_B	0.00000000000773	4-137	PIWI domain
3luh_C	0.00000000000773	4-137	PIWI domain
3luj_A	0.00000000000773	4-137	PIWI domain
3luj_B	0.00000000000773	4-137	PIWI domain
3luj_C	0.00000000000773	4-137	PIWI domain
3luk_A	0.00000000000773	4-137	PIWI domain
3luk_B	0.00000000000773	4-137	PIWI domain
3luk_C	0.00000000000773	4-137	PIWI domain
3lwl_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3lwm_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3lzi_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3lzj_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3m8p_A	9.8e-39	437-556	Ribonuclease H
3m8q_A	9.8e-39	437-556	Ribonuclease H
3m8r_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3m8s_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3maq_A	3.38e-97	6-392	DnaQ-like 3'-5' exonuclease
3mec_A	9.8e-39	437-556	Ribonuclease H
3med_A	9.8e-39	437-556	Ribonuclease H
3mee_A	9.8e-39	437-556	Ribonuclease H
3meg_A	9.8e-39	437-556	Ribonuclease H
3mwp_A	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mwp_B	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mwp_C	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mwt_A	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mwt_B	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mwt_C	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx2_A	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx2_B	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx2_C	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx5_A	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx5_B	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mx5_C	1.87e-144	379-573	DnaQ-like 3'-5' exonuclease
3mxi_A	9.31e-51	10-233	DnaQ-like 3'-5' exonuclease
3mxi_B	9.31e-51	10-233	DnaQ-like 3'-5' exonuclease
3mxj_A	2.5e-53	10-233	DnaQ-like 3'-5' exonuclease
3mxj_B	2.5e-53	10-233	DnaQ-like 3'-5' exonuclease
3mxm_A	2.79e-51	10-233	DnaQ-like 3'-5' exonuclease
3mxm_B	2.79e-51	10-233	DnaQ-like 3'-5' exonuclease
3nae_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3nbp_A	9.8e-39	437-556	Ribonuclease H
3nci_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3ndk_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3ne6_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3nf6_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf6_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf7_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf7_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf8_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf8_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf9_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nf9_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nfa_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
3nfa_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
3ngi_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3ngy_A	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3ngy_B	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3ngy_C	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3ngy_D	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3ngz_A	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3ngz_B	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3nh0_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh0_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh1_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh1_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh1_C	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh1_D	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh2_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh2_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh2_E	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nh2_F	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3nhg_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3o3f_A	1.42e-67	5-198	Ribonuclease H
3o3g_A	2.06e-68	5-198	Ribonuclease H
3o3h_A	1.42e-67	5-198	Ribonuclease H
3o4n_A	3.58e-35	6-149	Retroviral integrase, catalytic domain
3o4n_B	3.58e-35	6-149	Retroviral integrase, catalytic domain
3o4q_A	2.08e-35	6-149	Retroviral integrase, catalytic domain
3ojs_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3oju_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3os0_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3os0_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3os1_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3os1_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3os2_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3os2_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3ovn_A	4.8e-78	8-160	Retroviral integrase, catalytic domain
3ovn_B	4.8e-78	8-160	Retroviral integrase, catalytic domain
3oy9_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oy9_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oya_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oya_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyb_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyb_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyc_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyc_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyd_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyd_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oye_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oye_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyf_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyf_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyg_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyg_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyh_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyh_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3oyi_A	1.93e-44	124-273	Retroviral integrase, catalytic domain
3oyi_B	1.93e-44	124-273	Retroviral integrase, catalytic domain
3oyj_A	1.93e-44	124-273	Retroviral integrase, catalytic domain
3oyj_B	1.93e-44	124-273	Retroviral integrase, catalytic domain
3oyk_A	1.43e-42	124-273	Retroviral integrase, catalytic domain
3oyk_B	1.43e-42	124-273	Retroviral integrase, catalytic domain
3oyl_A	1.43e-42	124-273	Retroviral integrase, catalytic domain
3oyl_B	1.43e-42	124-273	Retroviral integrase, catalytic domain
3oym_A	6.16e-44	124-273	Retroviral integrase, catalytic domain
3oym_B	6.16e-44	124-273	Retroviral integrase, catalytic domain
3oyn_A	6.16e-44	124-273	Retroviral integrase, catalytic domain
3oyn_B	6.16e-44	124-273	Retroviral integrase, catalytic domain
3p1g_A	3.22e-44	20-154	SCOPe
3p56_A	5.03e-53	29-247	Ribonuclease H
3p56_D	5.03e-53	29-247	Ribonuclease H
3p5j_A	2.71e-58	29-248	Ribonuclease H
3p83_D	5.54e-51	13-211	Ribonuclease H
3p83_E	5.54e-51	13-211	Ribonuclease H
3p83_F	5.54e-51	13-211	Ribonuclease H
3po4_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3po5_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3psf_A	2.38e-24	517-669	Tex RuvX-like domain-like
3psi_A	3.03e-24	514-666	Tex RuvX-like domain-like
3puf_A	5.8e-57	32-250	Ribonuclease H
3puf_D	5.8e-57	32-250	Ribonuclease H
3puf_G	5.8e-57	32-250	Ribonuclease H
3puf_J	5.8e-57	32-250	Ribonuclease H
3puf_M	5.8e-57	32-250	Ribonuclease H
3puf_P	5.8e-57	32-250	Ribonuclease H
3pv8_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3pv8_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px0_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px0_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px4_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px4_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px6_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3px6_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3py8_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3q7b_A	1.93e-145	45-239	DnaQ-like 3'-5' exonuclease
3q7c_A	1.93e-145	45-239	DnaQ-like 3'-5' exonuclease
3qei_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qep_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qer_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qes_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qet_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qev_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qew_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qex_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qin_A	7.52e-62	12-145	Ribonuclease H
3qio_A	7.52e-62	12-145	Ribonuclease H
3qip_A	9.8e-39	437-556	Ribonuclease H
3qlh_A	5.1e-39	438-554	Ribonuclease H
3qnn_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qno_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3qo9_A	1.48e-39	439-557	Ribonuclease H
3qx8_A	0.00000000000773	4-137	PIWI domain
3qx8_B	0.00000000000773	4-137	PIWI domain
3qx8_C	0.00000000000773	4-137	PIWI domain
3qx9_A	0.00000000000773	4-137	PIWI domain
3qx9_B	0.00000000000773	4-137	PIWI domain
3qx9_C	0.00000000000773	4-137	PIWI domain
3r3l_A	5.58e-142	371-572	SCOPe
3r3l_B	5.58e-142	371-572	SCOPe
3r3l_C	5.58e-142	371-572	SCOPe
3rma_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rma_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rma_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rma_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmb_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmb_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmb_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmb_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmc_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmc_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmc_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmc_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmd_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmd_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmd_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rmd_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3rr7_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3rr8_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3rrg_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3rrh_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3rtv_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3rwu_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3s3m_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
3s3m_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
3s3n_A	1.43e-42	124-273	Retroviral integrase, catalytic domain
3s3n_B	1.43e-42	124-273	Retroviral integrase, catalytic domain
3s3o_A	6.16e-44	124-273	Retroviral integrase, catalytic domain
3s3o_B	6.16e-44	124-273	Retroviral integrase, catalytic domain
3s9h_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3saf_A	1.29e-83	2-310	DnaQ-like 3'-5' exonuclease
3saf_B	1.29e-83	2-310	DnaQ-like 3'-5' exonuclease
3sag_A	1.29e-83	2-310	DnaQ-like 3'-5' exonuclease
3sag_B	1.29e-83	2-310	DnaQ-like 3'-5' exonuclease
3sah_A	1.98e-83	2-310	DnaQ-like 3'-5' exonuclease
3sah_B	1.98e-83	2-310	DnaQ-like 3'-5' exonuclease
3sbg_A	1.07e-207	4-246	Prp8 beta-finger domain-like
3sbt_A	1.1e-208	4-246	Prp8 beta-finger domain-like
3scx_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3si6_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sjj_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3snn_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3spy_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3spz_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sq0_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sq1_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sq2_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sq4_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sun_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3suo_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sup_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3suq_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3sv3_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3sv4_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3syz_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3sz2_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3t19_A	9.8e-39	440-559	Ribonuclease H
3t19_B	9.8e-39	440-559	Ribonuclease H
3t1a_A	9.8e-39	440-559	Ribonuclease H
3t1a_B	9.8e-39	440-559	Ribonuclease H
3t3f_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
3tab_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tab_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tab_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tab_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tae_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tae_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tae_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tae_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3taf_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3taf_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3taf_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3taf_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tag_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tag_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tag_C	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tag_D	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
3tam_A	9.8e-39	440-559	Ribonuclease H
3tan_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3tap_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3taq_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3tar_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3thv_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3thv_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3ti0_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3ti0_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
3tr8_A	2.4e-67	9-181	DnaQ-like 3'-5' exonuclease
3tr8_B	2.4e-67	9-181	DnaQ-like 3'-5' exonuclease
3twh_A	1.54e-30	7-134	Ribonuclease H
3u3g_A	8.59e-57	4-136	SCOPe
3u3g_B	8.59e-57	4-136	SCOPe
3u3g_C	8.59e-57	4-136	SCOPe
3u3g_D	8.59e-57	4-136	SCOPe
3u3y_A	1.14e-50	10-233	DnaQ-like 3'-5' exonuclease
3u3y_B	1.14e-50	10-233	DnaQ-like 3'-5' exonuclease
3u6f_A	2.15e-51	10-233	DnaQ-like 3'-5' exonuclease
3u6f_B	2.15e-51	10-233	DnaQ-like 3'-5' exonuclease
3uiq_A	5.16e-75	4-375	DnaQ-like 3'-5' exonuclease
3uld_A	1.72e-30	11-138	Ribonuclease H
3v1o_A	1.36e-54	24-169	SCOPe
3v1q_A	3.55e-44	22-156	SCOPe
3v1r_A	1.36e-54	24-169	SCOPe
3v4i_A	8.06e-37	439-555	Ribonuclease H
3v4i_C	8.06e-37	439-555	Ribonuclease H
3v6d_A	8.06e-37	439-555	Ribonuclease H
3v6d_C	8.06e-37	439-555	Ribonuclease H
3v81_A	8.06e-37	439-555	Ribonuclease H
3v81_C	8.06e-37	439-555	Ribonuclease H
3v9s_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9s_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9u_A	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9u_B	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9u_C	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9u_D	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9w_A	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9w_B	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9w_C	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9w_D	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3v9x_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9x_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9x_C	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9x_D	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9z_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3v9z_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3va0_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3va0_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
3va3_A	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3va3_B	1.96e-68	38-226	DnaQ-like 3'-5' exonuclease
3vn5_A	5.41e-31	75-255	Ribonuclease H
3vna_A	0.0000000000000127	2-149	PIWI domain
3vnb_A	0.0000000000000215	2-150	PIWI domain
3vq4_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq4_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq5_A	2e-77	2-154	Retroviral integrase, catalytic domain
3vq5_B	2e-77	2-154	Retroviral integrase, catalytic domain
3vq6_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq6_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq7_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq7_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vq8_A	2e-77	2-154	Retroviral integrase, catalytic domain
3vq8_B	2e-77	2-154	Retroviral integrase, catalytic domain
3vq9_A	7.88e-81	7-160	Retroviral integrase, catalytic domain
3vq9_B	7.88e-81	7-160	Retroviral integrase, catalytic domain
3vq9_C	7.88e-81	7-160	Retroviral integrase, catalytic domain
3vqa_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqa_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqb_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqb_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqc_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqc_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqd_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqd_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqe_A	2e-77	2-154	Retroviral integrase, catalytic domain
3vqe_B	2e-77	2-154	Retroviral integrase, catalytic domain
3vqp_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqp_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqq_A	4.22e-78	3-155	Retroviral integrase, catalytic domain
3vqq_B	4.22e-78	3-155	Retroviral integrase, catalytic domain
3wne_A	2e-77	2-154	Retroviral integrase, catalytic domain
3wne_B	2e-77	2-154	Retroviral integrase, catalytic domain
3wnf_A	2e-77	2-154	Retroviral integrase, catalytic domain
3wnf_B	2e-77	2-154	Retroviral integrase, catalytic domain
3wng_A	2e-77	2-154	Retroviral integrase, catalytic domain
3wng_B	2e-77	2-154	Retroviral integrase, catalytic domain
3wnh_A	2e-77	2-154	Retroviral integrase, catalytic domain
3wnh_B	2e-77	2-154	Retroviral integrase, catalytic domain
3zcm_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zcm_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zef_B	5.8e-208	950-1196	Prp8 beta-finger domain-like
	2e-85	188-443	Prp8 beta-finger domain-like
3zef_E	5.8e-208	950-1196	Prp8 beta-finger domain-like
	2e-85	188-443	Prp8 beta-finger domain-like
3zso_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zso_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsq_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsq_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsr_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsr_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsv_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsv_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsw_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsw_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsx_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsx_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsy_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsy_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsz_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zsz_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt0_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt0_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt1_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt1_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt2_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt2_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt3_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt3_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt4_A	2.29e-79	12-164	Retroviral integrase, catalytic domain
3zt4_B	2.29e-79	12-164	Retroviral integrase, catalytic domain
4ah9_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ah9_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahc_A	3.04e-89	1-347	SCOPe
4ahc_B	3.04e-89	1-347	SCOPe
4ahr_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahr_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahs_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahs_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4aht_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4aht_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahu_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahu_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahv_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ahv_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ail_C	3.04e-89	1-347	SCOPe
4b08_A	2.15e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4b3o_A	4.64e-38	437-556	Ribonuclease H
4b3p_A	4.96e-36	424-558	Ribonuclease H
4b3q_A	8.77e-37	424-558	Ribonuclease H
4b8a_B	3.36e-82	4-283	CAF1-like ribonuclease
4b8c_A	2.29e-82	5-285	CAF1-like ribonuclease
4b8c_C	2.29e-82	5-285	CAF1-like ribonuclease
4b8c_E	2.29e-82	5-285	CAF1-like ribonuclease
4b8c_F	2.29e-82	5-285	CAF1-like ribonuclease
4b9l_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9m_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9n_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9s_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9t_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9u_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4b9v_A	3.87e-39	47-210	DnaQ-like 3'-5' exonuclease
4bac_A	2.72e-42	125-274	Retroviral integrase, catalytic domain
4bac_B	2.72e-42	125-274	Retroviral integrase, catalytic domain
4bdp_A	3.74e-39	8-171	DnaQ-like 3'-5' exonuclease
4bdy_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4bdy_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4bdz_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4bdz_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be0_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be0_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be1_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be1_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be2_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4be2_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4bwj_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4bwm_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4c8k_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4c8l_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4c8m_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4c8n_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4c8o_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4cch_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4ce9_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ce9_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cea_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cea_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceb_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceb_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cec_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cec_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ced_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ced_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cee_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cee_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cef_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cef_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceo_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceo_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceq_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ceq_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cer_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cer_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ces_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ces_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cez_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cez_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf0_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf0_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf1_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf1_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf2_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf2_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf8_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf8_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf9_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cf9_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfa_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfa_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfb_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfb_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfc_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfc_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfd_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cfd_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgd_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgd_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgf_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgf_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgg_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgg_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgh_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgh_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgi_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgi_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgj_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cgj_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chn_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chn_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cho_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cho_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chp_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chp_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chq_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chq_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chy_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chy_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chz_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4chz_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cie_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cie_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cif_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cif_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cig_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cig_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj3_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj3_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj4_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj4_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj5_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cj5_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cje_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cje_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjf_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjf_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjk_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjk_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjl_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjp_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjp_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjq_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjq_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjr_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjr_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjs_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjs_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjt_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjt_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cju_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cju_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjv_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjv_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjw_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4cjw_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck1_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck1_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck2_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck2_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck3_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ck3_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4czw_A	1.29e-20	441-618	DnaQ-like 3'-5' exonuclease
4d1q_A	9.66e-73	89-530	Hermes transposase-like
4d1q_B	9.66e-73	89-530	Hermes transposase-like
4d1q_G	9.66e-73	89-530	Hermes transposase-like
4d1q_H	9.66e-73	89-530	Hermes transposase-like
4df4_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4df8_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dfj_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dfk_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dfm_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dfp_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dg1_A	8.06e-37	437-549	Ribonuclease H
4dle_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dlg_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4dm0_A	2e-130	7-474	Transposase inhibitor (Tn5 transposase)
4dmn_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
4dqi_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqi_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqp_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqp_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqq_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqq_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqr_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqr_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dqs_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ds4_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ds4_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ds5_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ds5_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dse_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dse_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dsf_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dsf_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4dsi_A	2.19e-39	9-172	DnaQ-like 3'-5' exonuclease
4dsj_A	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
4dsj_B	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
4dsk_A	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
4dsl_A	2.19e-39	7-170	DnaQ-like 3'-5' exonuclease
4dtj_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtm_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtn_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dto_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtp_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtr_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dts_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtu_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dtx_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4du1_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4du3_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4du4_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4dwi_A	2.19e-39	9-172	DnaQ-like 3'-5' exonuclease
4e0d_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4e19_A	3.37e-53	73-197	SCOPe
4e19_B	3.37e-53	73-197	SCOPe
4e1m_A	1.22e-80	10-163	Retroviral integrase, catalytic domain
4e1n_A	1.22e-80	10-163	Retroviral integrase, catalytic domain
4e3s_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4e7h_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7h_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7i_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7i_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7j_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7j_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7k_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7k_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7l_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e7l_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4e89_A	6.11e-55	9-154	SCOPe
4elt_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4elu_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4elv_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
4ep4_A	2.15e-52	1-156	RuvC resolvase
4ep4_B	2.15e-52	1-156	RuvC resolvase
4ep5_A	3.44e-49	1-156	RuvC resolvase
4ez6_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ez6_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ez9_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4ez9_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f1n_A	3.76e-103	762-1045
4f1n_B	3.76e-103	762-1045
4f2r_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f2r_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f2s_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f2s_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f3o_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f3o_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f3t_A	4.94e-189	592-860
4f4k_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f4k_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f8r_A	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4f8r_D	2.32e-39	20-183	DnaQ-like 3'-5' exonuclease
4fcy_A	1.42e-76	183-403	mu transposase, core domain
4fcy_B	1.42e-76	183-403	mu transposase, core domain
4fj5_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fj7_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fj8_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fj9_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjg_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjh_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fji_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjj_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjk_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjl_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjm_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjn_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fjx_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fk0_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fk2_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4fk4_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4flt_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4flu_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4flv_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4flw_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4flx_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4fly_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4flz_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4fm0_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4fm1_A	7.93e-87	23-368	DnaQ-like 3'-5' exonuclease
4fm2_A	1.29e-85	23-366	DnaQ-like 3'-5' exonuclease
4fvm_A	2.15e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4fvu_A	1.16e-141	45-239	DnaQ-like 3'-5' exonuclease
4fw1_A	2.79e-33	3-160	Retroviral integrase, catalytic domain
4fw1_B	2.79e-33	3-160	Retroviral integrase, catalytic domain
4fw2_A	1e-36	51-208	Retroviral integrase, catalytic domain
4fw2_B	1e-36	51-208	Retroviral integrase, catalytic domain
4fxd_A	2.15e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4fxd_B	2.15e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4fyd_A	2e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4fyd_B	2e-67	3-226,259-465	DnaQ-like 3'-5' exonuclease
4fzx_C	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4fzx_D	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4fzy_A	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4fzy_B	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4fzz_A	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4fzz_B	6.18e-34	4-153	DnaQ-like 3'-5' exonuclease
4g0m_A	0.00000000215	21-148	PIWI domain
4g0m_B	0.00000000215	21-148	PIWI domain
4g0o_A	7.73e-16	3-138	PIWI domain
4g0o_B	7.73e-16	3-138	PIWI domain
4g0p_A	0.0000000000000365	2-146	PIWI domain
4g0q_A	0.0000000000000365	2-146	PIWI domain
4g0x_A	0.0000000000000365	2-146	PIWI domain
4g0y_A	0.0000000000000365	2-146	PIWI domain
4g0z_A	0.0000000000000365	2-146	PIWI domain
4g1q_A	1.48e-39	439-557	Ribonuclease H
4g9z_A	1.19e-145	15-209	DnaQ-like 3'-5' exonuclease
4gmj_B	3.77e-98	12-262	CAF1-like ribonuclease
4gmj_D	3.77e-98	12-262	CAF1-like ribonuclease
4gmj_F	3.77e-98	12-262	CAF1-like ribonuclease
4gv3_A	1.22e-145	16-210	DnaQ-like 3'-5' exonuclease
4gv6_A	1.22e-145	16-210	DnaQ-like 3'-5' exonuclease
4gv9_A	1.19e-145	15-209	DnaQ-like 3'-5' exonuclease
4gve_A	7.6e-130	12-205	DnaQ-like 3'-5' exonuclease
4gvm_A	8.59e-80	7-160	Retroviral integrase, catalytic domain
4gw6_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
4h4m_A	1.48e-39	439-557	Ribonuclease H
4h4o_A	1.48e-39	439-557	Ribonuclease H
4h8k_A	7.88e-54	4-136	SCOPe
4h8k_B	7.88e-54	4-136	SCOPe
4hcb_A	1.93e-135	9-474	DnaQ-like 3'-5' exonuclease
4hcb_B	1.93e-135	9-474	DnaQ-like 3'-5' exonuclease
4hcc_A	1.93e-135	9-474	DnaQ-like 3'-5' exonuclease
4hcc_B	1.93e-135	9-474	DnaQ-like 3'-5' exonuclease
4hec_A	0.0000219	26-178	SCOPe
4hec_B	0.0000219	26-178	SCOPe
4hht_A	1.68e-66	5-198	Ribonuclease H
4hkq_A	5.43e-52	525-670	SCOPe
4htu_A	1.4e-30	5-132	Ribonuclease H
4htu_B	1.4e-30	5-132	Ribonuclease H
4hue_A	1.4e-30	5-132	Ribonuclease H
4hue_B	1.4e-30	5-132	Ribonuclease H
4huf_A	1.4e-30	5-132	Ribonuclease H
4huf_B	1.4e-30	5-132	Ribonuclease H
4hug_A	1.4e-30	5-132	Ribonuclease H
4hug_B	1.4e-30	5-132	Ribonuclease H
4hvj_A	0.0000219	26-178	SCOPe
4hvj_B	0.0000219	26-178	SCOPe
4i2p_A	1.48e-39	439-557	Ribonuclease H
4i2q_A	1.48e-39	439-557	Ribonuclease H
4i43_B	1.48e-210	983-1229	Prp8 beta-finger domain-like
	2.06e-85	221-476	Prp8 beta-finger domain-like
4i7f_A	9.8e-39	437-556	Ribonuclease H
4i9l_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4i9q_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4i9q_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4ibn_A	2.15e-47	19-166	Ribonuclease H
4icl_A	1.48e-39	439-557	Ribonuclease H
4id1_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
4id5_A	1.48e-39	439-557	Ribonuclease H
4idk_A	1.48e-39	439-557	Ribonuclease H
4ifv_A	1.48e-39	439-557	Ribonuclease H
4ify_A	1.48e-39	439-557	Ribonuclease H
4ig0_A	1.48e-39	439-557	Ribonuclease H
4ig3_A	1.48e-39	439-557	Ribonuclease H
4ikf_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ikf_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ilg_B	1.05e-208	4-246	Prp8 beta-finger domain-like
4ilh_A	1.05e-208	4-246	Prp8 beta-finger domain-like
4ilj_A	2.36e-205	4-246	Prp8 beta-finger domain-like
4ilj_B	2.36e-205	4-246	Prp8 beta-finger domain-like
4j2a_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4j2b_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4j2d_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4j2e_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4jk7_A	1.33e-238	1-222	Prp8 beta-finger domain-like
4jk7_B	1.33e-238	1-222	Prp8 beta-finger domain-like
4jk8_A	9.02e-236	1-222	Prp8 beta-finger domain-like
4jk8_B	9.02e-236	1-222	Prp8 beta-finger domain-like
4jk9_A	1.33e-238	1-222	Prp8 beta-finger domain-like
4jk9_B	1.33e-238	1-222	Prp8 beta-finger domain-like
4jka_A	9.02e-236	1-222	Prp8 beta-finger domain-like
4jka_B	9.02e-236	1-222	Prp8 beta-finger domain-like
4jkb_A	1.42e-236	1-222	Prp8 beta-finger domain-like
4jkb_B	1.42e-236	1-222	Prp8 beta-finger domain-like
4jkc_A	4.72e-236	1-222	Prp8 beta-finger domain-like
4jkc_B	4.72e-236	1-222	Prp8 beta-finger domain-like
4jkd_A	3.87e-236	1-222	Prp8 beta-finger domain-like
4jkd_B	3.87e-236	1-222	Prp8 beta-finger domain-like
4jke_A	1.89e-236	1-222	Prp8 beta-finger domain-like
4jke_B	1.89e-236	1-222	Prp8 beta-finger domain-like
4jkf_A	1.27e-233	1-222	Prp8 beta-finger domain-like
4jkf_B	1.27e-233	1-222	Prp8 beta-finger domain-like
4jkg_A	9.02e-236	1-222	Prp8 beta-finger domain-like
4jkg_B	1.27e-233	1-222	Prp8 beta-finger domain-like
4jkh_A	3.22e-236	1-222	Prp8 beta-finger domain-like
4jkh_B	3.22e-236	1-222	Prp8 beta-finger domain-like
4jlh_A	8.59e-80	7-160	Retroviral integrase, catalytic domain
4jrp_A	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4jrp_B	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4jrq_A	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4jrq_B	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4js4_A	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4js4_B	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4js5_A	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4js5_B	8.14e-136	12-477	DnaQ-like 3'-5' exonuclease
4k7e_A	5.54e-136	35-230	DnaQ-like 3'-5' exonuclease
4k8x_A	1.49e-85	1-347	DnaQ-like 3'-5' exonuclease
4k8z_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
4kaz_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
4kb0_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
4kb0_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
4kb1_A	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
4kb1_B	9.42e-71	38-226	DnaQ-like 3'-5' exonuclease
4kfb_A	1.48e-39	439-557	Ribonuclease H
4khn_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khn_B	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khq_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khs_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khu_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khw_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4khy_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4ki4_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4ki6_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4kko_A	1.48e-39	439-557	Ribonuclease H
4ko0_A	1.48e-39	439-557	Ribonuclease H
4kpy_A	2.9e-73	282-685	PIWI domain
4kpy_B	2.9e-73	282-685	PIWI domain
4kre_A	1.18e-181	589-857	SCOPe
4krf_A	1.18e-181	589-857	SCOPe
4ktq_A	6.31e-39	2-85	DnaQ-like 3'-5' exonuclease
4ktw_A	7.09e-19	4-160	RuvC resolvase
4ktw_B	7.09e-19	4-160	RuvC resolvase
4ktz_A	7.09e-19	4-160	RuvC resolvase
4ktz_B	7.09e-19	4-160	RuvC resolvase
4kv8_A	9.8e-39	438-557	Ribonuclease H
4kxt_A	1.18e-181	593-861	SCOPe
4l8r_B	4.3e-50	75-258	DnaQ-like 3'-5' exonuclease
4l8r_E	4.3e-50	75-258	DnaQ-like 3'-5' exonuclease
4ld0_A	4.72e-50	4-159	RuvC resolvase
4ld0_B	4.72e-50	4-159	RuvC resolvase
4lh4_A	7.16e-81	26-179	Retroviral integrase, catalytic domain
4lh5_A	7.16e-81	26-179	Retroviral integrase, catalytic domain
4lsl_A	1.48e-39	439-557	Ribonuclease H
4lsn_A	1.48e-39	439-557	Ribonuclease H
4ly7_A	6.09e-95	4-141	Ribonuclease H
4m3r_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3t_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3u_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3w_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3x_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3y_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m3z_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m41_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m42_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m45_A	1.87e-71	4-375	DnaQ-like 3'-5' exonuclease
4m8o_A	1.14e-80	118-143,282-505	SCOPe
4mfb_A	1.48e-39	439-557	Ribonuclease H
4mh8_A	1.79e-56	499-641	SCOPe
4mq3_A	6.3e-44	4-132	SCOPe
4n41_A	2.9e-73	282-685	PIWI domain
4n41_B	2.9e-73	282-685	PIWI domain
4n47_A	2.9e-73	282-685	PIWI domain
4n56_A	8.21e-39	16-99	DnaQ-like 3'-5' exonuclease
4n5s_A	8.21e-39	16-99	DnaQ-like 3'-5' exonuclease
4n76_A	2.9e-73	282-685	PIWI domain
4n76_B	2.9e-73	282-685	PIWI domain
4nca_A	2.9e-73	282-685	PIWI domain
4nca_B	2.9e-73	282-685	PIWI domain
4ncb_A	2.9e-73	282-685	PIWI domain
4ncb_B	2.9e-73	282-685	PIWI domain
4ncg_A	9.8e-39	440-559	Ribonuclease H
4nlb_A	2.26e-73	2-273	DnaQ-like 3'-5' exonuclease
4nlc_A	2.26e-73	2-273	DnaQ-like 3'-5' exonuclease
4nyf_A	9.31e-79	15-167	Retroviral integrase, catalytic domain
4nyf_B	9.31e-79	15-167	Retroviral integrase, catalytic domain
4nyn_A	3.37e-53	73-197	SCOPe
4nyn_B	3.37e-53	73-197	SCOPe
4o0i_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
4o0j_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
4o44_A	1.48e-39	439-557	Ribonuclease H
4o4g_A	1.48e-39	439-557	Ribonuclease H
4o55_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
4o5b_A	8.59e-80	7-160	Retroviral integrase, catalytic domain
4o6h_A	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_B	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_C	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_D	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_E	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_F	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_G	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6h_H	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6i_A	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4o6i_B	1.48e-132	39-230	DnaQ-like 3'-5' exonuclease
4ojr_A	1.5e-81	8-161	Retroviral integrase, catalytic domain
4oke_A	0.0000142	4-156	SCOPe
4oke_B	0.0000142	4-156	SCOPe
4okj_A	0.0000142	4-156	SCOPe
4okj_B	0.0000142	4-156	SCOPe
4okk_A	0.0000142	4-156	SCOPe
4okk_B	0.0000142	4-156	SCOPe
4ola_A	4.83e-189	590-858
4olb_A	4.83e-189	590-858
4oo1_J	3.59e-93	5-284	DnaQ-like 3'-5' exonuclease
4opj_A	1.72e-30	11-138	Ribonuclease H
4opj_C	1.72e-30	11-138	Ribonuclease H
4opk_A	1.72e-30	11-138	Ribonuclease H
4opk_C	1.72e-30	11-138	Ribonuclease H
4ovl_A	3.22e-79	28-180	Retroviral integrase, catalytic domain
4ovl_B	3.22e-79	28-180	Retroviral integrase, catalytic domain
4p1z_A	4.94e-30	4-128	PIWI domain
4p1z_B	4.94e-30	4-128	PIWI domain
4p1z_C	4.94e-30	4-128	PIWI domain
4p1z_D	4.94e-30	4-128	PIWI domain
4pa1_A	2.79e-52	2-149	SCOPe
4pqu_A	8.06e-37	439-555	Ribonuclease H
4pqu_C	8.06e-37	439-555	Ribonuclease H
4ptf_A	5.59e-85	125-150,289-512	SCOPe
4puo_A	8.06e-37	439-555	Ribonuclease H
4puo_C	8.06e-37	439-555	Ribonuclease H
4pwd_A	8.06e-37	439-555	Ribonuclease H
4pwd_C	8.06e-37	439-555	Ribonuclease H
4py5_A	2.06e-35	74-265	Ribonuclease H
4q0b_A	8.06e-37	439-555	Ribonuclease H
4q0b_C	8.06e-37	439-555	Ribonuclease H
4q5v_A	9.91e-81	90-463	DnaQ-like 3'-5' exonuclease
4q5v_E	9.91e-81	90-463	DnaQ-like 3'-5' exonuclease
4q8h_A	5.68e-18	449-630	DnaQ-like 3'-5' exonuclease
4qag_A	1.09e-41	13-132	Ribonuclease H
4qag_B	1.09e-41	13-132	Ribonuclease H
4qcl_A	9.91e-81	90-463	DnaQ-like 3'-5' exonuclease
4qoz_B	4.3e-50	75-258	DnaQ-like 3'-5' exonuclease
4qoz_E	4.3e-50	75-258	DnaQ-like 3'-5' exonuclease
4r5p_A	8.06e-37	439-555	Ribonuclease H
4r5p_C	8.06e-37	439-555	Ribonuclease H
4rg8_A	1.77e-120	51-521	SCOPe
4rw4_A	1.48e-39	439-557	Ribonuclease H
4rw6_A	1.48e-39	439-557	Ribonuclease H
4rw7_A	1.48e-39	439-557	Ribonuclease H
4rw8_A	1.48e-39	439-557	Ribonuclease H
4rw9_A	1.48e-39	439-557	Ribonuclease H
4tsx_A	4.51e-80	7-160	Retroviral integrase, catalytic domain
4uqg_A	3.48e-39	7-170	DnaQ-like 3'-5' exonuclease
4w5n_A	4.83e-189	590-858
4w5o_A	4.83e-189	590-858
4w5q_A	4.83e-189	590-858
4w5r_A	4.83e-189	590-858
4w5t_A	4.83e-189	590-858
4wbq_A	0.000000000000276	10-193	DnaQ-like 3'-5' exonuclease
4wbq_B	0.000000000000276	10-193	DnaQ-like 3'-5' exonuclease
4we1_A	1.48e-39	439-557	Ribonuclease H
4x0p_A	0.00000215	109-229	DnaQ-like 3'-5' exonuclease
4x0p_B	0.00000215	109-229	DnaQ-like 3'-5' exonuclease
4x0p_C	0.00000215	109-229	DnaQ-like 3'-5' exonuclease
4x0p_D	0.00000215	109-229	DnaQ-like 3'-5' exonuclease
4x0q_A	0.00000206	82-202	DnaQ-like 3'-5' exonuclease
4x0q_B	0.00000206	82-202	DnaQ-like 3'-5' exonuclease
4xiu_A	6.31e-39	2-85	DnaQ-like 3'-5' exonuclease
4xr7_A	7.62e-18	567-748	DnaQ-like 3'-5' exonuclease
4xr7_D	7.62e-18	567-748	DnaQ-like 3'-5' exonuclease
4xr7_G	7.62e-18	567-748	DnaQ-like 3'-5' exonuclease
4xr7_J	7.62e-18	567-748	DnaQ-like 3'-5' exonuclease
4y1c_A	5.3e-78	12-164	Retroviral integrase, catalytic domain
4y1c_B	5.3e-78	12-164	Retroviral integrase, catalytic domain
4y1d_A	5.3e-78	12-164	Retroviral integrase, catalytic domain
4y1d_B	5.3e-78	12-164	Retroviral integrase, catalytic domain
4yfu_A	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
4yfu_D	2.19e-39	8-171	DnaQ-like 3'-5' exonuclease
4ynq_A	8.12e-51	10-233	DnaQ-like 3'-5' exonuclease
4ynq_B	8.12e-51	10-233	DnaQ-like 3'-5' exonuclease
4ynq_C	8.12e-51	10-233	DnaQ-like 3'-5' exonuclease
4ynq_D	8.12e-51	10-233	DnaQ-like 3'-5' exonuclease
4z0u_A	1.93e-95	3-141	Ribonuclease H
4z0u_B	1.93e-95	3-141	Ribonuclease H
4z4c_A	4.83e-189	590-858
4z4d_A	4.83e-189	590-858
4z4e_A	4.83e-189	590-858
4z4f_A	4.83e-189	590-858
4z4g_A	4.83e-189	590-858
4z4h_A	4.83e-189	590-858
4z4i_A	4.83e-189	590-858
4zhr_A	1.68e-40	439-558	Ribonuclease H
4ztf_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ztf_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ztj_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ztj_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
4ztu_A	0.000000227	232-281,315-390	SCOPe
4ztz_A	0.000000227	232-281,315-390	SCOPe
5awh_A	4.19e-64	322-778	PIWI domain
5awh_B	4.19e-64	322-778	PIWI domain
5c0w_K	8.86e-93	132-410	DnaQ-like 3'-5' exonuclease
5c0x_K	8.86e-93	132-410	DnaQ-like 3'-5' exonuclease
5c0y_A	1.65e-93	14-293	DnaQ-like 3'-5' exonuclease
5c0y_B	1.65e-93	14-293	DnaQ-like 3'-5' exonuclease
5c24_A	4.57e-34	429-537	Ribonuclease H
5c25_A	1.48e-39	439-557	Ribonuclease H
5c42_A	1.48e-39	439-557	Ribonuclease H
5c51_A	0.000000000953	95-117,154-275,309-384	SCOPe
5c52_A	0.000000000953	95-117,154-275,309-384	SCOPe
5c53_A	0.000000000953	95-117,154-275,309-384	SCOPe
5cy4_A	8.38e-70	16-188	SCOPe
5cy4_B	8.38e-70	16-188	SCOPe
5cy4_C	8.38e-70	16-188	SCOPe
5cy4_D	8.38e-70	16-188	SCOPe
5cy4_E	8.38e-70	16-188	SCOPe
5cy4_F	8.38e-70	16-188	SCOPe
5cym_A	1.48e-39	439-557	Ribonuclease H
5cyq_A	1.48e-39	439-557	Ribonuclease H
5cz1_A	4.3e-43	12-164	Retroviral integrase, catalytic domain
5cz1_B	4.3e-43	12-164	Retroviral integrase, catalytic domain
5cz1_C	4.3e-43	12-164	Retroviral integrase, catalytic domain
5cz1_D	4.3e-43	12-164	Retroviral integrase, catalytic domain
5cz2_A	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_B	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_C	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_D	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_E	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_F	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_G	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_H	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_I	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_J	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_K	5.51e-42	61-209	Retroviral integrase, catalytic domain
5cz2_L	5.51e-42	61-209	Retroviral integrase, catalytic domain
5d3g_A	1.48e-39	437-555	Ribonuclease H
5d3g_C	1.48e-39	437-555	Ribonuclease H
5dk5_A	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
5dk5_B	3.31e-29	17-217	DnaQ-like 3'-5' exonuclease
5dkt_A	5.54e-49	37-286	DnaQ-like 3'-5' exonuclease
5dku_A	8.38e-49	27-266	DnaQ-like 3'-5' exonuclease
5dku_B	8.38e-49	27-266	DnaQ-like 3'-5' exonuclease
5dmq_A	1.79e-56	495-637	SCOPe
5dmr_A	3.22e-57	19-161	SCOPe
5dzm_A	3.22e-40	15-134	Ribonuclease H
5dzm_B	3.22e-40	15-134	Ribonuclease H
5dzm_C	3.22e-40	15-134	Ribonuclease H
5dzm_D	3.22e-40	15-134	Ribonuclease H
5e41_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5e6f_A	4.72e-36	3-150	Mitochondrial resolvase ydc2 catalytic domain
5e6f_B	4.72e-36	3-150	Mitochondrial resolvase ydc2 catalytic domain
5ejk_A	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_B	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_C	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_D	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_E	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_F	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_G	1.36e-35	51-208	Retroviral integrase, catalytic domain
5ejk_H	1.36e-35	51-208	Retroviral integrase, catalytic domain
5eu7_A	1.15e-79	2-153	Retroviral integrase, catalytic domain
5eu7_B	1.15e-79	2-153	Retroviral integrase, catalytic domain
5exr_C	1.54e-80	91-464	DnaQ-like 3'-5' exonuclease
5exr_G	1.54e-80	91-464	DnaQ-like 3'-5' exonuclease
5fdl_A	4.03e-40	437-556	Ribonuclease H
5fiq_A	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fiq_C	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fiq_E	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fiq_G	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fiq_I	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fis_A	2.58e-19	16-199	DnaQ-like 3'-5' exonuclease
5fis_B	1.72e-19	16-199	DnaQ-like 3'-5' exonuclease
5fku_D	4.78e-88	9-186	DnaQ-like 3'-5' exonuclease
5fkv_D	4.78e-88	9-186	DnaQ-like 3'-5' exonuclease
5fkw_D	4.78e-88	9-186	DnaQ-like 3'-5' exonuclease
5frm_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5frm_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5frn_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5frn_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5fro_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5fro_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5g5s_A	3.09e-77	303-715	PIWI domain
5g5t_A	3.09e-77	301-713	PIWI domain
5gan_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5gap_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5gm6_A	2.58e-210	1706-1952	Prp8 beta-finger domain-like
	3.48e-85	944-1199	Prp8 beta-finger domain-like
5gmk_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5gnq_A	1.93e-71	9-380	DnaQ-like 3'-5' exonuclease
5gnq_B	1.93e-71	9-380	DnaQ-like 3'-5' exonuclease
5gq9_A	2.9e-73	282-685	PIWI domain
5gq9_B	2.9e-73	282-685	PIWI domain
5guh_A	1.61e-133	445-899
5h12_A	3.31e-91	1-346	SCOPe
5hbm_A	1.48e-39	439-557	Ribonuclease H
5hlf_A	1.48e-39	437-555	Ribonuclease H
5hlf_C	1.48e-39	437-555	Ribonuclease H
5hot_A	5.44e-80	56-209	Retroviral integrase, catalytic domain
5hot_B	5.44e-80	56-209	Retroviral integrase, catalytic domain
5hp1_A	1.48e-39	437-555	Ribonuclease H
5hp1_C	1.48e-39	437-555	Ribonuclease H
5hrn_A	1.5e-81	8-161	Retroviral integrase, catalytic domain
5hro_A	1.48e-39	437-555	Ribonuclease H
5hro_C	1.48e-39	437-555	Ribonuclease H
5hrp_A	2.79e-81	8-161	Retroviral integrase, catalytic domain
5hrr_A	2e-81	8-161	Retroviral integrase, catalytic domain
5hrs_A	8.59e-82	8-161	Retroviral integrase, catalytic domain
5i3u_A	1.48e-39	437-555	Ribonuclease H
5i3u_C	1.48e-39	437-555	Ribonuclease H
5i42_A	1.48e-39	437-555	Ribonuclease H
5i42_C	1.48e-39	437-555	Ribonuclease H
5i4a_A	1.61e-20	418-630	PIWI domain
5i4a_C	1.61e-20	418-630	PIWI domain
5ikn_A	4.19e-50	11-206	DnaQ-like 3'-5' exonuclease
5ikn_B	4.19e-50	11-206	DnaQ-like 3'-5' exonuclease
5ikn_C	4.19e-50	11-206	DnaQ-like 3'-5' exonuclease
5iud_A	3.22e-81	88-461	DnaQ-like 3'-5' exonuclease
5iud_D	3.22e-81	88-461	DnaQ-like 3'-5' exonuclease
5iud_G	3.22e-81	88-461	DnaQ-like 3'-5' exonuclease
5iud_J	3.22e-81	88-461	DnaQ-like 3'-5' exonuclease
5j1e_A	1.48e-39	439-557	Ribonuclease H
5j1e_C	1.48e-39	439-557	Ribonuclease H
5j2m_A	9.8e-39	437-556	Ribonuclease H
5j2n_A	9.8e-39	437-556	Ribonuclease H
5j2p_A	9.8e-39	437-556	Ribonuclease H
5j2q_A	9.8e-39	437-556	Ribonuclease H
5jl4_A	1.07e-79	7-160	Retroviral integrase, catalytic domain
5jl4_B	1.07e-79	7-160	Retroviral integrase, catalytic domain
5js1_A	4.83e-189	590-858
5js2_A	4.83e-189	590-858
5k14_A	9.8e-39	437-556	Ribonuclease H
5k36_J	3.59e-93	5-284	DnaQ-like 3'-5' exonuclease
5kgw_A	2.08e-80	7-160	Retroviral integrase, catalytic domain
5kgx_A	8.59e-80	7-160	Retroviral integrase, catalytic domain
5ki6_A	4.83e-189	590-858
5krs_A	1.43e-79	3-152	Retroviral integrase, catalytic domain
5krt_A	1.43e-79	3-152	Retroviral integrase, catalytic domain
5ktq_A	7.89e-39	6-89	DnaQ-like 3'-5' exonuclease
5l7z_A	0.0000991	35-201	DnaQ-like 3'-5' exonuclease
5lj3_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5lj5_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5lqw_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5lrp_A	1.83e-142	8-202	DnaQ-like 3'-5' exonuclease
5lrp_B	1.83e-142	8-202	DnaQ-like 3'-5' exonuclease
5ls4_A	1.83e-142	8-202	DnaQ-like 3'-5' exonuclease
5m0q_A	5.58e-48	58-208	SCOPe
5m0q_B	5.58e-48	58-208	SCOPe
5m0q_C	5.58e-48	58-208	SCOPe
5m0q_D	5.58e-48	58-208	SCOPe
5m0q_E	5.58e-48	58-208	SCOPe
5m0q_F	5.58e-48	58-208	SCOPe
5m0q_G	5.58e-48	58-208	SCOPe
5m0q_H	5.58e-48	58-208	SCOPe
5m0q_I	5.58e-48	58-208	SCOPe
5m0q_J	5.58e-48	58-208	SCOPe
5m0q_K	5.58e-48	58-208	SCOPe
5m0q_L	5.58e-48	58-208	SCOPe
5m0q_M	5.58e-48	58-208	SCOPe
5m0q_N	5.58e-48	58-208	SCOPe
5m0q_O	5.58e-48	58-208	SCOPe
5m0q_P	5.58e-48	58-208	SCOPe
5m0r_A	5.58e-48	58-208	SCOPe
5m0r_B	5.58e-48	58-208	SCOPe
5m0r_C	5.58e-48	58-208	SCOPe
5m0r_D	5.58e-48	58-208	SCOPe
5m0r_E	5.58e-48	58-208	SCOPe
5m0r_F	5.58e-48	58-208	SCOPe
5m0r_G	5.58e-48	58-208	SCOPe
5m0r_H	5.58e-48	58-208	SCOPe
5m0r_I	5.58e-48	58-208	SCOPe
5m0r_J	5.58e-48	58-208	SCOPe
5m0r_K	5.58e-48	58-208	SCOPe
5m0r_L	5.58e-48	58-208	SCOPe
5m0r_M	5.58e-48	58-208	SCOPe
5m0r_N	5.58e-48	58-208	SCOPe
5m0r_O	5.58e-48	58-208	SCOPe
5m0r_P	5.58e-48	58-208	SCOPe
5m1s_D	4.78e-88	9-186	DnaQ-like 3'-5' exonuclease
5mdn_A	1.59e-78	4-390	SCOPe
5mdn_B	1.59e-78	4-390	SCOPe
5mma_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5mma_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5mmb_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5mmb_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5mps_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5mq0_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5mqf_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5n2e_A	5.45e-47	7-198,227-360,438-509	DnaQ-like 3'-5' exonuclease
5n2g_A	5.45e-47	7-198,227-360,438-509	DnaQ-like 3'-5' exonuclease
5n2h_A	3.32e-44	7-198,227-360,438-509	DnaQ-like 3'-5' exonuclease
5nkl_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5no1_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5no1_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5nrl_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5o7t_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5o9z_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5oi2_A	7.16e-81	26-179	Retroviral integrase, catalytic domain
5oi3_A	2.43e-81	26-179	Retroviral integrase, catalytic domain
5oi5_A	7.16e-81	26-179	Retroviral integrase, catalytic domain
5oi8_A	2.43e-81	26-179	Retroviral integrase, catalytic domain
5oia_A	2.43e-81	26-179	Retroviral integrase, catalytic domain
5oki_A	1.14e-81	118-143,282-505	SCOPe
5oki_B	1.14e-81	118-143,282-505	SCOPe
5ol8_A	0.000000509	121-314	Mitochondrial resolvase ydc2 catalytic domain
5ol8_B	0.000000509	121-314	Mitochondrial resolvase ydc2 catalytic domain
5ol8_C	0.000000509	121-314	Mitochondrial resolvase ydc2 catalytic domain
5ol8_D	0.000000509	121-314	Mitochondrial resolvase ydc2 catalytic domain
5ola_A	0.000000193	36-229	Mitochondrial resolvase ydc2 catalytic domain
5ola_B	0.000000193	36-229	Mitochondrial resolvase ydc2 catalytic domain
5ola_C	0.000000193	36-229	Mitochondrial resolvase ydc2 catalytic domain
5ola_D	0.000000193	36-229	Mitochondrial resolvase ydc2 catalytic domain
5omf_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5omq_A	1.49e-85	1-347	DnaQ-like 3'-5' exonuclease
5omv_A	1.49e-85	1-347	DnaQ-like 3'-5' exonuclease
5ovn_A	1.65e-30	410-532	Ribonuclease H
5oxj_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5swm_A	1.72e-30	11-138	Ribonuclease H
5swm_B	1.72e-30	11-138	Ribonuclease H
5szt_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5t3a_A	1.65e-47	2-149	SCOPe
5t7b_A	5.26e-186	592-860
5tep_A	1.48e-39	439-557	Ribonuclease H
5ter_A	1.48e-39	439-557	Ribonuclease H
5the_A	9.45e-104	265-548
5the_C	9.45e-104	265-548
5the_E	9.45e-104	265-548
5the_G	9.45e-104	265-548
5tuq_A	1.48e-39	439-557	Ribonuclease H
5tw3_A	1.48e-39	439-557	Ribonuclease H
5txl_A	8.06e-37	439-555	Ribonuclease H
5txl_C	8.06e-37	439-555	Ribonuclease H
5txm_A	2.39e-37	439-557	Ribonuclease H
5txm_C	2.39e-37	439-557	Ribonuclease H
5txn_A	8.06e-37	439-555	Ribonuclease H
5txn_C	8.06e-37	439-555	Ribonuclease H
5txo_A	8.06e-37	439-555	Ribonuclease H
5txo_C	8.06e-37	439-555	Ribonuclease H
5txp_A	8.06e-37	439-555	Ribonuclease H
5txp_C	8.06e-37	439-555	Ribonuclease H
5u1c_A	5.51e-80	151-304	Retroviral integrase, catalytic domain
5u1c_B	5.51e-80	151-304	Retroviral integrase, catalytic domain
5u1c_C	5.51e-80	151-304	Retroviral integrase, catalytic domain
5u1c_D	5.51e-80	151-304	Retroviral integrase, catalytic domain
5uop_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5uop_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5uoq_A	3.44e-44	124-273	Retroviral integrase, catalytic domain
5uoq_B	3.44e-44	124-273	Retroviral integrase, catalytic domain
5us2_A	1.72e-30	11-138	Ribonuclease H
5usa_A	1.72e-30	11-138	Ribonuclease H
5use_A	1.72e-30	11-138	Ribonuclease H
5usg_A	1.72e-30	11-138	Ribonuclease H
5uv5_A	1.48e-39	439-557	Ribonuclease H
5uv5_C	1.48e-39	439-557	Ribonuclease H
5ux0_A	1.8e-19	418-630	PIWI domain
5ux0_D	1.8e-19	418-630	PIWI domain
5v5f_A	1.93e-51	2-199	DnaQ-like 3'-5' exonuclease
5v5f_B	1.93e-51	2-199	DnaQ-like 3'-5' exonuclease
5v5f_C	1.93e-51	2-199	DnaQ-like 3'-5' exonuclease
5vaj_A	1.72e-30	11-138	Ribonuclease H
5vaj_B	1.72e-30	11-138	Ribonuclease H
5vm9_A	3.22e-188	587-861	SCOPe
5vm9_C	3.22e-188	587-861	SCOPe
5vqq_A	1.48e-39	439-557	Ribonuclease H
5vqr_A	1.48e-39	439-557	Ribonuclease H
5vqs_A	1.48e-39	439-557	Ribonuclease H
5vqt_A	1.48e-39	439-557	Ribonuclease H
5vqu_A	1.48e-39	439-557	Ribonuclease H
5vqv_A	1.48e-39	439-557	Ribonuclease H
5vqw_A	1.48e-39	439-557	Ribonuclease H
5vqx_A	1.48e-39	439-557	Ribonuclease H
5vqy_A	1.48e-39	439-557	Ribonuclease H
5vqz_A	1.48e-39	439-557	Ribonuclease H
5vu5_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5vu6_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5vu7_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5vu8_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5vu9_A	1.16e-87	1-347	DnaQ-like 3'-5' exonuclease
5vz6_A	9.8e-39	440-559	Ribonuclease H
5vzj_J	3.59e-93	5-284	DnaQ-like 3'-5' exonuclease
5w6k_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5w6q_A	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5w6q_C	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5w6q_G	6.31e-39	3-86	DnaQ-like 3'-5' exonuclease
5w6v_A	1.18e-181	590-858	SCOPe
5w7n_A	1.29e-30	4-131	Ribonuclease H
5w7o_A	1.29e-30	4-131	Ribonuclease H
5wea_A	1.5e-184	590-858
5wjr_A	1.72e-30	11-138	Ribonuclease H
5wsg_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5xjc_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5xn0_A	6.19e-40	439-557	Ribonuclease H
5xn0_C	6.19e-40	439-557	Ribonuclease H
5xn1_A	6.19e-40	439-557	Ribonuclease H
5xn1_C	6.19e-40	439-557	Ribonuclease H
5xn2_A	6.19e-40	439-557	Ribonuclease H
5xn2_C	6.19e-40	439-557	Ribonuclease H
5xou_A	2.09e-72	282-685	PIWI domain
5xou_B	2.09e-72	282-685	PIWI domain
5xow_A	2.09e-72	282-685	PIWI domain
5xp8_A	2.9e-73	282-685	PIWI domain
5xpa_A	2.09e-72	282-685	PIWI domain
5xpg_A	2.09e-72	282-685	PIWI domain
5xq2_A	2.09e-72	282-685	PIWI domain
5xq2_B	2.09e-72	282-685	PIWI domain
5y88_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5y9p_A	4.9e-62	71-260	Ribonuclease H
5ylz_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5yws_A	3.95e-53	44-267	DnaQ-like 3'-5' exonuclease
5yws_B	3.95e-53	44-267	DnaQ-like 3'-5' exonuclease
5ywt_A	3.95e-53	44-267	DnaQ-like 3'-5' exonuclease
5ywt_B	3.95e-53	44-267	DnaQ-like 3'-5' exonuclease
5ywu_A	3.12e-53	27-250	DnaQ-like 3'-5' exonuclease
5ywu_B	3.12e-53	27-250	DnaQ-like 3'-5' exonuclease
5ywv_A	3.12e-53	27-250	DnaQ-like 3'-5' exonuclease
5ywv_B	3.12e-53	27-250	DnaQ-like 3'-5' exonuclease
5yzg_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5z56_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5z57_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5z58_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
5z9x_A	9.25e-30	139-296	DnaQ-like 3'-5' exonuclease
5zwm_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
5zwo_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
6amo_A	5.1e-39	439-555	Ribonuclease H
6amo_C	5.1e-39	439-555	Ribonuclease H
6an2_A	5.1e-39	439-555	Ribonuclease H
6an2_C	5.1e-39	439-555	Ribonuclease H
6an8_A	5.1e-39	439-555	Ribonuclease H
6an8_C	5.1e-39	439-555	Ribonuclease H
6anq_A	5.1e-39	439-555	Ribonuclease H
6anq_C	5.1e-39	439-555	Ribonuclease H
6aoc_A	1.48e-39	439-557	Ribonuclease H
6aoc_C	1.48e-39	439-557	Ribonuclease H
6as7_A	9.91e-81	90-463	DnaQ-like 3'-5' exonuclease
6asw_A	5.1e-39	439-555	Ribonuclease H
6asw_C	5.1e-39	439-555	Ribonuclease H
6avm_A	5.1e-39	439-555	Ribonuclease H
6avm_C	5.1e-39	439-555	Ribonuclease H
6avt_A	5.1e-39	439-555	Ribonuclease H
6avt_C	5.1e-39	439-555	Ribonuclease H
6b19_A	5.37e-38	439-558	Ribonuclease H
6bk8_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
6bsg_A	4.64e-38	438-557	Ribonuclease H
6bsh_A	4.64e-38	438-557	Ribonuclease H
6bsi_A	4.64e-38	438-557	Ribonuclease H
6bsj_A	4.64e-38	438-557	Ribonuclease H
6c0j_A	1.48e-39	439-557	Ribonuclease H
6c0k_A	1.48e-39	439-557	Ribonuclease H
6c0l_A	1.48e-39	439-557	Ribonuclease H
6c0n_A	1.48e-39	439-557	Ribonuclease H
6c0o_A	1.48e-39	439-557	Ribonuclease H
6c0p_A	1.48e-39	439-557	Ribonuclease H
6c0r_A	1.48e-39	439-557	Ribonuclease H
6cbd_A	4.83e-189	590-858
6cgf_A	1.48e-39	439-557	Ribonuclease H
6d6q_J	5.77e-83	181-489	DnaQ-like 3'-5' exonuclease
6d6r_J	5.77e-83	181-489	DnaQ-like 3'-5' exonuclease
6d8a_A	4.35e-64	335-791	PIWI domain
6d8a_F	4.35e-64	335-791	PIWI domain
6d8f_A	4.35e-64	335-791	PIWI domain
6d8f_F	4.35e-64	335-791	PIWI domain
6d8p_A	4.35e-64	335-791	PIWI domain
6d8p_B	4.35e-64	335-791	PIWI domain
6d92_A	4.35e-64	335-791	PIWI domain
6d92_F	4.35e-64	335-791	PIWI domain
6d95_A	3.87e-64	302-758	PIWI domain
6d95_F	3.87e-64	302-758	PIWI domain
6d9k_A	4.35e-64	335-791	PIWI domain
6d9k_F	4.35e-64	335-791	PIWI domain
6d9l_A	4.35e-64	335-791	PIWI domain
6d9l_F	4.35e-64	335-791	PIWI domain
6dmn_A	1.47e-31	11-138	Ribonuclease H
6dmv_A	1.47e-31	11-138	Ribonuclease H
6do8_A	1.47e-31	11-138	Ribonuclease H
6do9_A	1.25e-31	5-132	Ribonuclease H
6doa_A	1.25e-31	5-132	Ribonuclease H
6dob_A	1.47e-31	11-138	Ribonuclease H
6doc_A	1.47e-31	11-138	Ribonuclease H
6dod_A	1.47e-31	11-138	Ribonuclease H
6doe_A	1.25e-31	5-132	Ribonuclease H
6dof_A	1.47e-31	11-138	Ribonuclease H
6dog_A	1.47e-31	11-138	Ribonuclease H
6doh_A	1.15e-31	5-132	Ribonuclease H
6doi_A	1.15e-31	5-132	Ribonuclease H
6doj_A	1.22e-31	5-132	Ribonuclease H
6dok_A	1.22e-31	5-132	Ribonuclease H
6dol_A	1.22e-31	5-132	Ribonuclease H
6dom_A	1.25e-31	5-132	Ribonuclease H
6don_A	1.25e-31	5-132	Ribonuclease H
6doo_A	1.25e-31	5-132	Ribonuclease H
6dop_A	1.47e-31	11-138	Ribonuclease H
6doq_A	1.47e-31	11-138	Ribonuclease H
6dor_A	1.25e-31	5-132	Ribonuclease H
6dos_A	1.22e-31	5-132	Ribonuclease H
6dot_A	1.25e-31	5-132	Ribonuclease H
6dou_A	1.25e-31	5-132	Ribonuclease H
6dov_A	1.25e-31	5-132	Ribonuclease H
6dow_A	1.25e-31	5-132	Ribonuclease H
6dox_A	1.25e-31	5-132	Ribonuclease H
6doy_A	1.47e-31	11-138	Ribonuclease H
6doz_A	1.47e-31	11-138	Ribonuclease H
6dp0_A	1.22e-31	5-132	Ribonuclease H
6dp1_A	1.47e-31	11-138	Ribonuclease H
6dp2_A	1.47e-31	11-138	Ribonuclease H
6dp3_A	1.47e-31	11-138	Ribonuclease H
6dp4_A	1.47e-31	11-138	Ribonuclease H
6dp5_A	1.47e-31	11-138	Ribonuclease H
6dp6_A	1.47e-31	11-138	Ribonuclease H
6dp7_A	1.22e-31	5-132	Ribonuclease H
6dp8_A	1.47e-31	11-138	Ribonuclease H
6dp9_A	1.25e-31	5-132	Ribonuclease H
6dpa_A	1.25e-31	5-132	Ribonuclease H
6dpb_A	1.25e-31	5-132	Ribonuclease H
6dpc_A	1.25e-31	5-132	Ribonuclease H
6dpd_A	1.25e-31	5-132	Ribonuclease H
6dpe_A	1.25e-31	5-132	Ribonuclease H
6dpf_A	1.25e-31	5-132	Ribonuclease H
6dpg_A	6.45e-31	11-138	Ribonuclease H
6dph_A	6.45e-31	11-138	Ribonuclease H
6dpi_A	1.47e-31	11-138	Ribonuclease H
6dpj_A	1.47e-31	11-138	Ribonuclease H
6dpk_A	1.47e-31	11-138	Ribonuclease H
6dpl_A	1.47e-31	11-138	Ribonuclease H
6dpm_A	1.47e-31	11-138	Ribonuclease H
6dpn_A	6.45e-31	11-138	Ribonuclease H
6dpo_A	6.45e-31	11-138	Ribonuclease H
6dpp_A	1.25e-31	5-132	Ribonuclease H
6duf_A	1.48e-39	439-557	Ribonuclease H
6dug_A	1.48e-39	439-557	Ribonuclease H
6duh_A	1.48e-39	439-557	Ribonuclease H
6dww_A	3.67e-70	90-511	Hermes transposase-like
6dwy_A	3.67e-70	90-511	Hermes transposase-like
6dwz_A	3.67e-70	90-511	Hermes transposase-like
6dwz_E	3.67e-70	90-511	Hermes transposase-like
6dx0_A	3.67e-70	90-511	Hermes transposase-like
6eli_A	1.48e-39	439-557	Ribonuclease H
6ex9_A	1.22e-78	2-152	Retroviral integrase, catalytic domain
6exn_A	2.79e-210	1832-2078	Prp8 beta-finger domain-like
	3.74e-85	1070-1325	Prp8 beta-finger domain-like
6fbc_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbd_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbe_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbf_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbg_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbh_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6fbi_A	7.89e-39	4-87	DnaQ-like 3'-5' exonuclease
6ff4_A	2.13e-265	1760-2006	Prp8 beta-finger domain-like
	1.61e-90	997-1253	Prp8 beta-finger domain-like
6fsz_KK	1.05e-92	130-408	DnaQ-like 3'-5' exonuclease
6ft6_KK	2.17e-94	130-408	DnaQ-like 3'-5' exonuclease
6gmh_M	2.45e-23	780-934	Tex RuvX-like domain-like

---

Add assignments from individual genomes

Genome		Domains	Proteins
ALL		2587822	2587822
Homo sapiens 76_38	Human	215	209
Pan troglodytes 76_2.1.4	Chimpanzee	62	59
Gorilla gorilla 76_3.1	Western gorilla	94	89
Pongo abelii 76_2	Sumatran orangutan	66	63
Nomascus leucogenys 76_1.0	Northern white-cheeked gibbon	72	69
Papio anubis 76	Olive baboon	62	59
Macaca mulatta 76_1	Rhesus monkey	97	93
Callithrix jacchus 76_3.2.1	White-tufted-ear marmoset	124	119
Otolemur garnettii 76_3	Small-eared galago	60	58
Microcebus murinus 76_1	Gray mouse lemur	49	45
Rattus norvegicus 76_5.0	Norway rat	62	60
Mus musculus 76_38	House mouse	118	114
Dipodomys ordii 76_1	Ord's kangaroo rat	47	42
Ictidomys tridecemlineatus 76_2	Thirteen-lined ground squirrel	61	59
Heterocephalus glaber v1.7-2	Naked mole-rat	60	57
Cavia porcellus 76_3	Domestic guinea pig	58	56
Oryctolagus cuniculus 76_2	Rabbit	61	57
Ochotona princeps 76	American pika	46	42
Tupaia belangeri 76	Northern tree shrew	50	41
Sus scrofa 76_10.2	Pig	64	63
Bos taurus 76_3.1	Cattle	62	59
Ovis aries 76_3.1	Sheep	116	103
Vicugna pacos 76_1	Alpaca	36	33
Tursiops truncatus 76_1	Bottlenose dolphin	55	52
Mustela putorius furo 76_1.0	Domestic ferret	66	62
Ailuropoda melanoleuca 76_1	Giant panda	67	62
Canis familiaris 76_3.1	Dog	79	75
Felis catus 76_6.2	Domestic cat	105	94
Equus caballus 76_2	Horse	70	67
Myotis lucifugus 76_2.0	Little brown bat	66	64
Pteropus vampyrus 76_1	Large flying fox	58	53
Sorex araneus 76_1	European shrew	45	38
Erinaceus europaeus 76	Western European hedgehog	39	35
Procavia capensis 76_1	Cape rock hyrax	57	49
Loxodonta africana 76_3	African savanna elephant	63	61
Echinops telfairi 76	Small Madagascar hedgehog	40	36
Dasypus novemcinctus 76_2	Nine-banded armadillo	76	71
Choloepus hoffmanni 76_1	Hoffmann's two-fingered sloth	40	36
Macropus eugenii 76_1.0	Tammar wallaby	48	44
Sarcophilus harrisii 76_7.0	Tasmanian devil	63	60
Monodelphis domestica 76_5	Gray short-tailed opossum	189	143
Ornithorhynchus anatinus 76_5	Platypus	54	54
Saccoglossus kowalevskii v3.0		234	228
Petromyzon marinus 76_7.0	Sea lamprey	39	38
Meleagris gallopavo 76_2	Turkey	46	45
Gallus gallus 76_4	Chicken	47	45
Anas platyrhynchos 76_1.0	Mallard	48	46
Taeniopygia guttata 76_3.2.4	Zebra finch	70	59
Ficedula albicollis 76_1.0	Collared flycatcher	45	44
Pelodiscus sinensis 76_1.0	Chinese soft-shelled turtle	276	270
Anolis carolinensis 76_2.0	Green anole	143	142
Xenopus laevis	African clawed frog	87	85
Xenopus tropicalis 76_4.2	Tropical clawed frog	84	83
Latimeria chalumnae 76_1	Coelacanth	593	587
Lepisosteus oculatus 76	Spotted gar	88	85
Gadus morhua 76_1	Atlantic cod	130	128
Tetraodon nigroviridis 76_8	Spotted green pufferfish	63	59
Takifugu rubripes 76_4	Torafugu	126	117
Gasterosteus aculeatus 76_1	Three-spined stickleback	92	89
Oryzias latipes 76_1	Japanese medaka	74	73
Xiphophorus maculatus 76_4.4.2	Southern platyfish	68	67
Poecilia formosa 76	Amazon molly	73	72
Oreochromis niloticus 76_1.0	Nile tilapia	173	171
Astyanax mexicanus 76	Mexican tetra	81	80
Danio rerio 76_9	Zebrafish	136	134
Oikopleura dioica		90	89
Ciona savignyi 76_2.0	Pacific transparent sea squirt	110	101
Ciona intestinalis 76	Vase tunicate	51	50
Strongylocentrotus purpuratus v3.1	Purple sea urchin	521	503
Adineta vaga		185	180
Octopus bimaculoides 280		142	141
Crassostrea gigas 22	Pacific oyster	95	89
Lottia gigantea	Owl limpet	93	92
Helobdella robusta		174	173
Capitella sp. I		155	153
Danaus plexippus OGS1.0	Monarch butterfly	53	51
Heliconius melpomene	Postman butterfly	46	44
Bombyx mori	Domestic silkworm	175	169
Nasonia vitripennis	Jewel wasp	301	297
Apis mellifera 38.2d (Not maintained)	Honey bee	85	85
Harpegnathos saltator v3.3	Jerdon's jumping ant	175	173
Linepithema humile v1.1	Argentine ant	138	134
Pogonomyrmex barbatus v1.2	Red harvester ant	59	57
Solenopsis invicta v.2.2.3	Red fire ant	131	129
Acromyrmex echinatior v3.8	Panamanian leafcutter ant	57	56
Atta cephalotes v1.1		60	59
Camponotus floridanus v3.3	Florida carpenter ant	226	225
Lucilia cuprina	Australian sheep blowfly	52	49
Drosophila grimshawi 1.3		36	35
Drosophila willistoni 1.3		57	56
Drosophila pseudoobscura 2.13		62	60
Drosophila persimilis 1.3		61	60
Drosophila suzukii		50	47
Drosophila yakuba 1.3		40	39
Drosophila simulans 1.3		31	30
Drosophila sechellia 1.3		36	35
Drosophila melanogaster 76_5	Fruit fly	68	67
Drosophila erecta 1.3		35	34
Drosophila ananassae 1.3		47	46
Drosophila virilis 1.2		38	37
Drosophila mojavensis 1.3		42	41
Megaselia scalaris 22		50	49
Aedes aegypti 55 (Not maintained)	Yellow fever mosquito	43	42
Culex pipiens quinquefasciatus	Southern house mosquito	85	81
Anopheles darlingi 22	American malaria mosquito	36	35
Anopheles gambiae 49_3j	African malaria mosquito	32	31
Tribolium castaneum 3.0	Red flour beetle	243	233
Pediculus humanus corporis (Early assembly)	Human body louse	33	32
Acyrthosiphon pisum	Pea aphid	224	220
Rhodnius prolixus 22		140	138
Daphnia pulex	Common water flea	179	178
Strigamia maritima 22		249	245
Sarcoptes scabiei		26	25
Tetranychus urticae	Two-spotted spider mite	53	52
Ixodes scapularis (Preliminary)	Black-legged tick	86	85
Pristionchus pacificus		108	105
Meloidogyne incognita	Southern root-knot nematode	314	313
Meloidogyne hapla		114	114
Onchocerca volvulus 22		63	61
Brugia malayi WS250	Agent of lymphatic filariasis	50	48
Caenorhabditis japonica		273	268
Caenorhabditis brenneri		328	318
Caenorhabditis remanei		405	398
Caenorhabditis elegans 76_235	Roundworm	127	122
Caenorhabditis briggsae 2		161	154
Trichinella spiralis 22		276	271
Hymenolepis microstoma		81	78
Echinococcus multilocularis		46	45
Echinococcus granulosus		31	29
Taenia solium	Pork tapeworm	69	68
Schistosoma mansoni		41	40
Mnemiopsis leidyi	Sea walnut	136	135
Thelohanellus kitauei		425	424
Acropora digitifera v1.0		293	291
Nematostella vectensis 1.0	Starlet sea anemone	88	85
Hydra vulgaris		1005	992
Amphimedon queenslandica		683	680
Trichoplax adhaerens		39	38
Proterospongia sp. ATCC 50818		24	23
Monosiga brevicollis		27	26
Sphaeroforma arctica JP610		60	57
Capsaspora owczarzaki ATCC 30864		29	26
Conidiobolus coronatus NRRL28638 v1.0		17	16
Mortierella verticillata NRRL 6337		42	41
Phycomyces blakesleeanus		40	38
Rhizopus oryzae RA 99-880		334	331
Mucor circinelloides		32	31
Rhizomucor miehei CAU432		54	52
Malassezia globosa CBS 7966		40	38
Sporisorium reilianum 22		25	24
Ustilago maydis		43	40
Mixia osmundae IAM 14324 v1.0		25	24
Cronartium quercuum f. sp. fusiforme G11 v1.0		104	103
Puccinia graminis f. sp. tritici CRL 75-36-700-3		352	349
Melampsora laricis-populina		50	49
Rhodotorula graminis WP1 v1.0		26	25
Sporobolomyces roseus IAM 13481		18	17
Microbotryum violaceum 22		32	31
Wallemia sebi v1.0		29	28
Sphaerobolus stellatus v1.0		235	234
Piloderma croceum F 1598 v1.0		133	132
Serpula lacrymans var. lacrymans S7.9		49	48
Coniophora puteana		83	82
Hydnomerulius pinastri v2.0		58	57
Paxillus rubicundulus Ve08.2h10 v1.0		281	280
Pisolithus microcarpus 441 v1.0		269	268
Pisolithus tinctorius Marx 270 v1.0		109	108
Scleroderma citrinum Foug A v1.0		334	333
Coprinopsis cinerea okayama7 130 v3		41	40
Pleurotus ostreatus	Oyster mushroom	45	44
Amanita thiersii Skay4041 v1.0		35	34
Amanita muscaria Koide v1.0	Fly agaric	164	163
Galerina marginata v1.0		136	135
Hebeloma cylindrosporum h7 v2.0		80	79
Laccaria bicolor S238N-H82		151	150
Agaricus bisporus var. bisporus		69	68
Schizophyllum commune		78	76
Stereum hirsutum FP-91666 SS1 v1.0		90	89
Heterobasidion annosum		65	64
Gloeophyllum trabeumv1.0		77	76
Punctularia strigosozonata v1.0		75	72
Sebacina vermifera MAFF 305830 v1.0		51	50
Fomitiporia mediterranea v1.0		53	52
Tulasnella calospora AL13/4D v1.0		83	81
Postia placenta		66	65
Wolfiporia cocos MD-104 SS10 v1.0		92	91
Fomitopsis pinicolav1.0		104	103
Fomitopsis pinicola FP-58527 SS1 v3.0		79	78
Phanerochaete chrysosporium RP-78 2.1		163	161
Dichomitus squalens		64	63
Trametes versicolor v1.0		118	117
Tremella mesenterica	Witches' butter	38	37
Daldinia eschscholzii EC12 v1.0		32	31
Apiospora montagnei NRRL 25634 v1.0		51	50
Magnaporthe poae ATCC 64411 22		22	21
Magnaporthe grisea 70-15		29	28
Podospora anserina		34	33
Sporotrichum thermophile ATCC 42464		30	29
Thielavia terrestris NRRL 8126		34	33
Chaetomium globosum CBS 148.51		141	137
Neurospora tetrasperma		31	29
Neurospora discreta FGSC 8579		26	24
Neurospora crassa OR74A		31	29
Cryphonectria parasitica	Chestnut blight fungus	28	27
Verticillium albo-atrum VaMs.102		28	28
Verticillium dahliae VdLs.17		26	25
Acremonium alcalophilumv 1.0		46	44
Glomerella graminicola 22		32	31
Fusarium graminearum		27	26
Nectria haematococca mpVI		43	42
Fusarium oxysporum f. sp. lycopersici 4286		174	167
Fusarium verticillioides 7600		27	26
Trichoderma asperellum CBS 433.97 v1.0		36	35
Trichoderma atroviride		31	30
Trichoderma citrinoviride v1.0		29	28
Trichoderma reesei 1.2		30	29
Trichoderma virens Gv29-8		33	32
Trichoderma longibrachiatum ATCC 18648 v1.0		30	29
Trichoderma harzianum CBS 226.95 v1.0		42	41
Amorphotheca resinae v1.0	Creosote fungus	27	26
Botrytis cinerea B05.10		63	63
Sclerotinia sclerotiorum		131	130
Blumeria graminis 22		44	43
Didymella exigua CBS 183.55 v1.0		38	37
Leptosphaeria maculans 22		32	31
Setosphaeria turcica v1.0		42	41
Cochliobolus miyabeanus ATCC 44560 v1.0		4	3
Cochliobolus victoriae FI3 v1.0		7	6
Cochliobolus carbonum 26-R-13 v1.0		8	7
Cochliobolus heterostrophus	Southern corn leaf blight pathogen	35	34
Alternaria brassicicola		43	43
Cochliobolus lunatus m118 v2.0		3	2
Pyrenophora teres f. teres 22		96	94
Pyrenophora tritici-repentis		95	93
Stagonospora nodorum		47	46
Mycosphaerella graminicola IPO323		48	47
Zasmidium cellare ATCC 36951 v1.0		7	6
Dothistroma septosporum		38	37
Septoria musiva v1.0		35	34
Mycosphaerella fijiensis CIRAD86		40	39
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0		30	29
Paracoccidioides brasiliensis Pb18		29	28
Coccidioides posadasii RMSCC 3488		30	29
Coccidioides immitis RS		26	25
Ajellomyces dermatitidis SLH14081		29	28
Histoplasma capsulatum class NAmI strain WU24		34	33
Microsporum canis CBS 113480		24	22
Trichophyton equinum CBS 127.97		26	24
Trichophyton verrucosum HKI 0517		28	27
Arthroderma benhamiae CBS 112371		27	26
Trichophyton tonsurans CBS 112818		29	28
Trichophyton rubrum CBS 118892		29	28
Uncinocarpus reesii 1704		29	28
Aspergillus zonatus v1.0		29	28
Penicillium chrysogenum Wisconsin 54-1255		64	63
Penicillium chrysogenum v1.0		48	47
Aspergillus acidus v1.0		35	34
Aspergillus fumigatus Af293		55	54
Aspergillus brasiliensis v1.0		29	28
Aspergillus nidulans FGSC A4		24	23
Aspergillus sydowii v1.0		32	30
Aspergillus versicolor v1.0		29	28
Aspergillus glaucus		35	34
Aspergillus carbonarius ITEM 5010		32	31
Neosartorya fischeri NRRL 181		29	28
Aspergillus terreus NIH2624		39	38
Aspergillus tubingensis v1.0		31	30
Aspergillus wentii v1.0		26	25
Aspergillus oryzae RIB40		34	33
Aspergillus niger 22		57	56
Aspergillus niger ATCC 1015		20	19
Aspergillus flavus NRRL3357		30	29
Aspergillus clavatus NRRL 1		26	25
Penicillium marneffei ATCC 18224		114	113
Tuber melanosporum Mel28 22		30	29
Tuber melanosporum Vittad	Perigord truffle	837	834
Hansenula polymorpha v2.0		20	19
Dekkera bruxellensis CBS 2499 v2.0		23	22
Pichia membranifaciensv1.0		21	20
Candida tanzawaensis NRRL Y-17324 v1.0		21	20
Candida dubliniensis CD36		35	34
Candida tropicalis MYA-3404		27	26
Candida parapsilosis		22	21
Candida albicans SC5314		31	30
Lodderomyces elongisporus NRRL YB-4239		50	49
Babjeviella inositovora NRRL Y-12698 v1.0		20	19
Pichia stipitis CBS 6054		22	21
Candida guilliermondii ATCC 6260		23	22
Hyphopichia burtonii NRRL Y-1933 v1.0		22	21
Debaromyces hansenii		27	26
Wickerhamomyces anomalus		26	25
Pichia pastoris GS115		17	16
Hanseniaspora valbyensis NRRL Y-1626 v1.1		20	19
Yarrowia lipolytica CLIB122		51	50
Candida lusitaniae ATCC 42720		25	24
Metschnikowia bicuspidata NRRL YB-4993 v1.0		21	20
Vanderwaltozyma polyspora DSM 70294		49	47
Candida glabrata CBS138		20	19
Kluyveromyces thermotolerans CBS 6340		20	19
Lachancea kluyveri		26	25
Kluyveromyces waltii		58	57
Ashbya gossypii ATCC 10895		19	18
Zygosaccharomyces rouxii		19	18
Saccharomyces mikatae MIT		33	32
Saccharomyces paradoxus MIT		29	28
Saccharomyces cerevisiae 76	Baker's yeast	65	64
Saccharomyces bayanus MIT		35	34
Kluyveromyces lactis		19	18
Schizosaccharomyces cryophilus OY26 22		25	23
Schizosaccharomyces octosporus yFS286		22	21
Schizosaccharomyces japonicus yFS275		23	22
Schizosaccharomyces pombe	Fission yeast	33	32
Catenaria anguillulae PL171 v1.0		124	122
Allomyces macrogynus ATCC 38327		71	68
Spizellomyces punctatus DAOM BR117		67	63
Dictyostelium discoideum		67	66
Dictyostelium purpureum		59	58
Entamoeba dispar 1.2		27	26
Entamoeba invadens 1.2		61	60
Entamoeba histolytica 1		23	22
Selaginella moellendorffii		90	89
Pinus taeda	Loblolly pine	196	186
Picea abies	Norway spruce	92	89
Eucalyptus grandis v201	Rose gum	141	139
Theobroma cacao B97-61/B2 v1	Cacao	5298	5064
Gossypium raimondii v221		386	382
Citrus clementina v165		231	230
Citrus sinensis v154	Sweet orange	230	228
Thellungiella halophila v173		186	184
Brassica rapa Chiifu-401 1.2	Field mustard	129	126
Capsella rubella v183		151	149
Arabidopsis lyrata	Lyrate rockcress	136	133
Arabidopsis thaliana 10	Thale cress	177	175
Carica papaya	Papaya	89	87
Medicago truncatula	Barrel medic	129	126
Phaseolus vulgaris v186	French bean	154	153
Glycine max v109	Soybean	336	292
Cucumis sativus v122	Cucumber	218	213
Fragaria vesca	Wild strawberry	527	514
Malus domestica v196	Apple	332	325
Prunus persica v139	Peach	463	458
Linum usitatissimum v200	Flax	157	155
Manihot esculenta v147	Cassava	125	123
Populus trichocarpa v156	Black cottonwood	291	290
Vitis vinifera	Wine grape	84	81
Mimulus guttatus v140	Spotted monkey flower	139	137
Solanum lycopersicum v.2.3	Tomato	229	228
Solanum tuberosum	Potato	251	249
Actinidia chinensis Hongyang		318	308
Aquilegia coerulea v195		265	263
Triticum urartu 22		176	169
Triticum aestivum 22	Bread wheat	712	707
Aegilops tauschii 22		171	164
Brachypodium distachyon	Stiff brome	310	307
Oryza barthii 22	African wild rice	148	132
Oryza meridionalis 22		152	144
Oryza glumaepatula 22		155	145
Oryza glaberrima	African rice	193	185
Oryza punctata 22		164	148
Oryza nivara 22		173	157
Oryza brachyantha 22	Malo sina	161	158
Oryza sativa ssp. japonica 5.0	Japanese rice	5176	4202
Oryza sativa v193	Rice	5130	4160
Phyllostachys heterocyclavar. pubescens	Kikko-chiku	122	116
Panicum virgatum v202	Switchgrass	549	549
Setaria italica v164	Foxtail millet	161	159
Zea mays subsp. mays	Maize	186	184
Zea mays v181	Maize	204	202
Sorghum bicolor	Sorghum	463	454
Musa balbisiana	Balbis banana	1700	1625
Musa acuminata 22	Wild Malaysian banana	112	110
Amborella trichopoda 22		154	153
Physcomitrella patens		115	113
Coccomyxa subellipsoidea sp. C-169 v2		32	29
Asterochloris sp. Cgr/DA1pho v1.0		30	29
Chlorella variabilis sp. NC64A		38	37
Chlorella vulgaris		31	28
Volvox carteri f. nagariensis		81	80
Volvox carteri v199		42	41
Chlamydomonas reinhardtii 4.0		46	45
Ostreococcus sp. RCC809		25	24
Ostreococcus lucimarinus CCE9901		27	26
Ostreococcus tauri		31	29
Bathycoccus prasinos		27	25
Micromonas sp. RCC299		32	30
Micromonas pusilla CCMP1545 v3.0		40	39
Cyanidioschyzon merolae strain 10D 22		20	19
Cyanidioschyzon merolae		20	19
Porphyridium purpureum 02_2012		86	82
Thecamonas trahens ATCC 50062		36	34
Bigelowiella natans CCMP2755 22		75	74
Giardia lamblia 2.3		13	13
Cyanophora paradoxa		116	115
Leishmania mexicana 2.4		32	31
Leishmania major strain Friedlin		32	31
Leishmania infantum JPCM5 2.4		32	31
Leishmania braziliensis MHOM/BR/75/M2904 2.4		36	34
Trypanosoma vivax		77	75
Trypanosoma cruzi strain CL Brener		24	24
Trypanosoma congolense 2.4		72	68
Trypanosoma brucei gambiense v4.1		35	34
Trypanosoma brucei TREU927 v4.1		32	31
Ectocarpus siliculosus		60	58
Aureococcus anophagefferens		34	33
Albugo laibachii 22		152	150
Pythium iwayamai DAOM BR242034 22		99	97
Pythium arrhenomanes ATCC 12531 22		153	150
Pythium ultimum v1.7-2		154	152
Pythium aphanidermatum DAOM BR444 22		77	76
Pythium irregulare DAOM BR486 22		51	50
Pythium vexans DAOM BR484 22		61	58
Phytophthora ramorum 1.1	Sudden oak death agent	493	469
Phytophthora sojae 1.1		1127	1016
Phytophthora infestans T30-4		398	393
Phytophthora capsici		193	184
Hyaloperonospora arabidopsidis 22		50	48
Phaeodactylum tricornutumCCAP 1055/1		117	115
Fragilariopsis cylindrus		138	135
Thalassiosira pseudonana CCMP1335		54	53
Perkinsus marinus ATCC 50983		419	414
Paramecium tetraurelia		61	58
Tetrahymena thermophila SB210 1		54	52
Ichthyophthirius multifiliis strain G5		18	17
Cryptosporidium hominis		8	7
Cryptosporidium muris		11	10
Cryptosporidium parvum Iowa II		10	9
Neospora caninum		26	21
Toxoplasma gondii VEG		23	19
Toxoplasma gondii ME49		26	22
Toxoplasma gondii GT1		22	19
Babesia bovis T2Bo		30	28
Theileria parva		12	11
Theileria annulata		13	12
Plasmodium falciparum 3D7		18	16
Plasmodium vivax SaI-1 7.0		19	16
Plasmodium knowlesi strain H		18	16
Plasmodium yoelii ssp. yoelii 1		19	16
Plasmodium chabaudi		17	15
Plasmodium berghei ANKA		17	15
Symbiodinium minutum clade B1 v1.2		844	829
Naegleria gruberi		51	49
Trichomonas vaginalis		3094	3093
Guillardia theta CCMP2712 v1.0		48	47
Emiliania huxleyi CCMP1516		102	101
Acholeplasma laidlawii PG-8A		10	10
Thermobaculum terrenum ATCC BAA-798		7	7
Leptolyngbya sp. PCC 7376		57	57
Pseudanabaena sp. PCC 7367		22	22
Acaryochloris marina MBIC11017		144	144
Synechocystis sp. PCC 6803		33	33
Thermosynechococcus sp. NK55		7	7
Thermosynechococcus elongatus BP-1		27	27
Synechococcus sp. PCC 7502		23	23
Synechococcus sp. PCC 6312		11	11
Synechococcus sp. CC9311		9	9
Synechococcus elongatus PCC 7942		10	10
Prochlorococcus marinus str. MIT 9515		9	9
Microcoleus sp. PCC 7113		31	30
Trichodesmium erythraeum IMS101		59	59
Geitlerinema sp. PCC 7407		12	12
Cyanothece sp. PCC 8802		19	19
Gloeocapsa sp. PCC 7428		14	14
cyanobacterium UCYN-A		6	6
Halothece sp. PCC 7418		10	10
Microcystis aeruginosa NIES-843		93	92
Gloeobacter violaceus PCC 7421		30	30
Rivularia sp. PCC 7116		17	17
Calothrix sp. PCC 7507		31	31
Anabaena variabilis ATCC 29413		36	36
'Nostoc azollae' 0708		13	13
Nostoc sp. PCC 7107		29	29
Nostoc punctiforme PCC 73102		57	57
Nostoc sp. PCC 7120		14	14
Nostoc sp. PCC 7524		26	26
Anabaena sp. 90		18	18
Candidatus Phytoplasma mali		5	5
Aster yellows witches'-broom phytoplasma AYWB		15	15
Onion yellows phytoplasma OY-M		16	16
Mesoplasma florum L1		5	5
Ureaplasma parvum serovar 3 str. ATCC 27815		7	7
Ureaplasma urealyticum serovar 10 str. ATCC 33699		6	6
Mycoplasma leachii 99/014/6		13	13
Mycoplasma mycoides subsp. capri LC str. 95010		28	28
Mycoplasma capricolum subsp. capricolum ATCC 27343		7	7
Mycoplasma haemocanis str. Illinois		4	4
Mycoplasma wenyonii str. Massachusetts		2	2
Mycoplasma suis KI3806		2	2
Mycoplasma crocodyli MP145		5	5
Mycoplasma conjunctivae HRC/581		8	8
Mycoplasma haemofelis Ohio2		4	4
Mycoplasma bovis HB0801		45	45
Mycoplasma penetrans HF-2		25	25
Mycoplasma putrefaciens KS1		5	5
Mycoplasma mobile 163K		5	5
Mycoplasma fermentans M64		13	13
Mycoplasma arthritidis 158L3-1		5	5
Mycoplasma agalactiae PG2		5	5
Mycoplasma synoviae 53		9	9
Mycoplasma pulmonis UAB CTIP		8	8
Mycoplasma pneumoniae 309		3	3
Mycoplasma hyorhinis GDL-1		5	5
Mycoplasma hyopneumoniae 168		16	16
Mycoplasma hominis ATCC 23114		5	5
Mycoplasma genitalium G37		2	2
Mycoplasma gallisepticum str. F		3	3
Conexibacter woesei DSM 14684		12	12
Cryptobacterium curtum DSM 15641		8	8
Eggerthella sp. YY7918		10	10
Eggerthella lenta DSM 2243		12	12
Slackia heliotrinireducens DSM 20476		15	15
Olsenella uli DSM 7084		8	8
Atopobium parvulum DSM 20469		10	10
Coriobacterium glomerans PW2		7	7
Rubrobacter xylanophilus DSM 9941		12	12
Ilumatobacter coccineus		11	11
Acidimicrobium ferrooxidans DSM 10331		28	28
Thermobispora bispora DSM 43833		10	10
Nakamurella multipartita DSM 44233		65	65
Acidothermus cellulolyticus 11B		10	10
Modestobacter marinus		29	29
Blastococcus saxobsidens DD2		35	35
Geodermatophilus obscurus DSM 43160		19	19
Kineococcus radiotolerans SRS30216		14	14
Catenulispora acidiphila DSM 44928		15	15
Stackebrandtia nassauensis DSM 44728		12	12
Frankia symbiont of Datisca glomerata		125	125
Frankia sp. EAN1pec		97	97
Frankia alni ACN14a		18	18
Thermobifida fusca YX		13	13
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111		17	17
Thermomonospora curvata DSM 43183		14	14
Streptosporangium roseum DSM 43021		27	27
Kitasatospora setae KM-6054		39	39
Streptomyces coelicolor A3(2)		30	30
Streptomyces sp. PAMC26508		15	15
Streptomyces flavogriseus ATCC 33331		26	26
Streptomyces sp. SirexAA-E		15	15
Streptomyces griseus subsp. griseus NBRC 13350		19	19
Streptomyces bingchenggensis BCW-1		72	72
Streptomyces violaceusniger Tu 4113		51	51
Streptomyces avermitilis MA-4680		39	38
Streptomyces cattleya NRRL 8057 = DSM 46488		30	30
Streptomyces scabiei 87.22		38	38
Streptomyces hygroscopicus subsp. jinggangensis 5008		77	77
Actinosynnema mirum DSM 43827		21	21
Saccharomonospora viridis DSM 43017		11	11
Pseudonocardia dioxanivorans CB1190		46	46
Saccharopolyspora erythraea NRRL 2338		61	61
Amycolatopsis mediterranei U32		31	31
Kribbella flavida DSM 17836		10	10
Nocardioides sp. JS614		23	23
Propionibacterium propionicum F0230a		16	16
Propionibacterium acnes SK137		10	10
Microlunatus phosphovorus NM-1		60	60
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1		43	43
Salinispora arenicola CNS-205		26	26
Salinispora tropica CNB-440		26	26
Verrucosispora maris AB-18-032		24	24
Micromonospora sp. L5		19	19
Micromonospora aurantiaca ATCC 27029		30	30
Actinoplanes sp. N902-109		23	23
Actinoplanes sp. SE50/110		29	29
Actinoplanes missouriensis 431		29	29
Segniliparus rotundus DSM 44985		13	13
Tsukamurella paurometabola DSM 20162		43	43
Gordonia sp. KTR9		30	30
Gordonia polyisoprenivorans VH2		27	26
Gordonia bronchialis DSM 43247		63	63
Rhodococcus jostii RHA1		66	66
Rhodococcus equi 103S		12	12
Rhodococcus opacus B4		50	50
Rhodococcus erythropolis PR4		35	35
Nocardia cyriacigeorgica GUH-2		16	16
Nocardia farcinica IFM 10152		23	23
Amycolicicoccus subflavus DQS3-9A1		15	15
Mycobacterium massiliense str. GO 06		10	10
Mycobacterium abscessus ATCC 19977		16	16
Mycobacterium sp. JLS		40	40
Mycobacterium intracellulare ATCC 13950		30	30
Mycobacterium avium 104		38	38
Mycobacterium vanbaalenii PYR-1		49	49
Mycobacterium canettii CIPT 140010059		36	36
Mycobacterium africanum GM041182		23	23
Mycobacterium tuberculosis KZN 1435		31	31
Mycobacterium tuberculosis		27	27
Mycobacterium bovis BCG str. Pasteur 1173P2		17	17
Mycobacterium rhodesiae NBB3		30	30
Mycobacterium ulcerans Agy99		17	17
Mycobacterium gilvum PYR-GCK		59	59
Mycobacterium chubuense NBB4		37	37
Mycobacterium marinum M		35	35
Mycobacterium smegmatis str. MC2 155		44	44
Mycobacterium leprae Br4923		7	7
Corynebacterium resistens DSM 45100		33	33
Corynebacterium aurimucosum ATCC 700975		51	51
Corynebacterium kroppenstedtii DSM 44385		13	13
Corynebacterium efficiens YS-314		53	53
Corynebacterium ulcerans 0102		12	12
Corynebacterium urealyticum DSM 7109		33	33
Corynebacterium jeikeium K411		50	50
Corynebacterium variabile DSM 44702		37	37
Corynebacterium pseudotuberculosis 316		12	12
Corynebacterium glutamicum R		21	21
Corynebacterium diphtheriae NCTC 13129		32	32
Tropheryma whipplei TW08/27		5	5
Sanguibacter keddieii DSM 10542		12	12
Kytococcus sedentarius DSM 20547		26	25
Beutenbergia cavernae DSM 12333		9	9
Leifsonia xyli subsp. xyli str. CTCB07		32	32
Microbacterium testaceum StLB037		16	16
Clavibacter michiganensis subsp. michiganensis NCPPB 382		10	10
Jonesia denitrificans DSM 20603		9	9
Intrasporangium calvum DSM 43043		18	18
Brachybacterium faecium DSM 4810		12	12
Isoptericola variabilis 225		15	15
Xylanimonas cellulosilytica DSM 15894		15	15
Cellulomonas flavigena DSM 20109		23	23
Cellulomonas fimi ATCC 484		19	19
[Cellvibrio] gilvus ATCC 13127		27	27
Arthrobacter phenanthrenivorans Sphe3		46	46
Arthrobacter chlorophenolicus A6		18	18
Arthrobacter aurescens TC1		23	23
Arthrobacter arilaitensis Re117		46	46
Kocuria rhizophila DC2201		16	16
Rothia mucilaginosa DY-18		10	10
Rothia dentocariosa ATCC 17931		11	11
Arthrobacter sp. Rue61a		14	14
Arthrobacter sp. FB24		16	16
Renibacterium salmoninarum ATCC 33209		89	89
Micrococcus luteus NCTC 2665		23	23
Gardnerella vaginalis 409-05		10	10
Bifidobacterium longum subsp. longum JDM301		30	30
Bifidobacterium animalis subsp. lactis Bl-04		9	9
Bifidobacterium dentium Bd1		18	18
Bifidobacterium breve ACS-071-V-Sch8b		14	13
Bifidobacterium bifidum S17		16	16
Bifidobacterium adolescentis ATCC 15703		18	18
Arcanobacterium haemolyticum DSM 20595		20	20
Mobiluncus curtisii ATCC 43063		20	20
Actinomyces sp. F0330		20	20
Caldilinea aerophila DSM 14535 = NBRC 104270		13	13
Dehalococcoides ethenogenes 195		7	7
Dehalococcoides sp. BAV1		14	14
Dehalogenimonas lykanthroporepellens BL-DC-9		21	21
Anaerolinea thermophila UNI-1		16	16
Thermomicrobium roseum DSM 5159		9	9
Sphaerobacter thermophilus DSM 20745		12	12
Herpetosiphon aurantiacus DSM 785		43	43
Roseiflexus sp. RS-1		16	16
Roseiflexus castenholzii DSM 13941		19	19
Chloroflexus sp. MS-G		9	9
Chloroflexus sp. Y-400-fl		12	12
Chloroflexus aggregans DSM 9485		9	9
Chloroflexus aurantiacus J-10-fl		12	12
Truepera radiovictrix DSM 17093		10	10
Deinococcus gobiensis I-0		43	43
Deinococcus deserti VCD115		22	22
Deinococcus maricopensis DSM 21211		11	11
Deinococcus geothermalis DSM 11300		49	49
Deinococcus proteolyticus MRP		24	24
Deinococcus radiodurans R1		30	30
Oceanithermus profundus DSM 14977		8	8
Marinithermus hydrothermalis DSM 14884		22	22
Meiothermus silvanus DSM 9946		119	119
Meiothermus ruber DSM 1279		10	10
Thermus sp. CCB_US3_UF1		22	22
Thermus scotoductus SA-01		21	21
Thermus thermophilus HB27		24	24
Anaerococcus prevotii DSM 20548		8	8
Finegoldia magna ATCC 29328		10	10
Veillonella parvula DSM 2008		9	9
Megasphaera elsdenii DSM 20460		23	23
Acidaminococcus intestini RyC-MR95		26	26
Acidaminococcus fermentans DSM 20731		16	16
Megamonas hypermegale		10	10
Selenomonas sputigena ATCC 35185		21	21
Selenomonas ruminantium subsp. lactilytica TAM6421		25	25
Erysipelothrix rhusiopathiae str. Fujisawa		34	34
Natranaerobius thermophilus JW/NM-WN-LF		30	30
Symbiobacterium thermophilum IAM 14863		39	39
Clostridiales genomosp. BVAB3 str. UPII9-5		8	8
Clostridium clariflavum DSM 19732		61	61
Eubacterium siraeum		9	9
Clostridium cellulolyticum H10		63	63
Clostridium thermocellum ATCC 27405		57	57
Ethanoligenens harbinense YUAN-3		11	11
Faecalibacterium prausnitzii		4	4
Ruminococcus sp.		8	8
Ruminococcus bromii		6	6
Ruminococcus albus 7		16	16
Thermaerobacter marianensis DSM 12885		12	12
Sulfobacillus acidophilus DSM 10332		42	42
Oscillibacter valericigenes Sjm18-20		122	122
butyrate-producing bacterium SS3/4		13	13
butyrate-producing bacterium SM4/1		4	4
Candidatus Desulforudis audaxviator MP104C		18	18
Thermincola potens JR		21	21
Pelotomaculum thermopropionicum SI		40	40
Desulfosporosinus acidiphilus SJ4		13	13
Desulfosporosinus orientis DSM 765		29	29
Dehalobacter sp. DCA		41	41
Dehalobacter sp. CF		41	41
Syntrophobotulus glycolicus DSM 8271		18	18
Desulfitobacterium hafniense Y51		56	56
Desulfitobacterium dehalogenans ATCC 51507		13	13
Desulfotomaculum reducens MI-1		58	58
Desulfotomaculum acetoxidans DSM 771		74	74
Desulfotomaculum kuznetsovii DSM 6115		25	25
Desulfotomaculum carboxydivorans CO-1-SRB		30	30
Desulfotomaculum ruminis DSM 2154		29	29
Acetobacterium woodii DSM 1030		22	22
Eubacterium eligens ATCC 27750		12	12
Eubacterium limosum KIST612		8	8
Clostridium difficile 630		12	12
Clostridium sticklandii DSM 519		13	13
Filifactor alocis ATCC 35896		21	21
Clostridium saccharolyticum WM1		21	21
Clostridium phytofermentans ISDg		15	15
Clostridium lentocellum DSM 5427		32	32
[Ruminococcus] obeum		7	7
[Ruminococcus] torques		12	12
Eubacterium rectale M104/1		9	9
Eubacterium rectale ATCC 33656		18	18
Coprococcus sp. ART55/1		9	9
Roseburia hominis A2-183		8	8
Roseburia intestinalis		10	10
Butyrivibrio proteoclasticus B316		17	17
Butyrivibrio fibrisolvens		9	9
Syntrophothermus lipocalidus DSM 12680		8	8
Syntrophomonas wolfei subsp. wolfei str. Goettingen		16	16
Heliobacterium modesticaldum Ice1		47	47
Alkaliphilus oremlandii OhILAs		16	16
Alkaliphilus metalliredigens QYMF		48	48
Candidatus Arthromitus sp. SFB-mouse-Japan		8	8
Clostridium sp. BNL1100		14	14
Clostridium novyi NT		9	9
Clostridium ljungdahlii DSM 13528		16	16
Clostridium kluyveri DSM 555		29	29
Clostridium beijerinckii NCIMB 8052		20	20
Clostridium tetani E88		22	22
Clostridium perfringens ATCC 13124		11	11
Clostridium cellulovorans 743B		24	24
Clostridium botulinum A str. ATCC 3502		12	12
Clostridium acetobutylicum ATCC 824		11	11
Mahella australiensis 50-1 BON		22	22
Thermosediminibacter oceani DSM 16646		20	20
Caldicellulosiruptor obsidiansis OB47		19	19
Caldicellulosiruptor kronotskyensis 2002		13	13
Caldicellulosiruptor hydrothermalis 108		16	16
Caldicellulosiruptor owensensis OL		7	7
Caldicellulosiruptor lactoaceticus 6A		27	27
Caldicellulosiruptor kristjanssonii 177R1B		35	35
Caldicellulosiruptor saccharolyticus DSM 8903		57	57
Caldicellulosiruptor bescii DSM 6725		18	18
Thermoanaerobacterium xylanolyticum LX-11		33	33
Thermoanaerobacterium thermosaccharolyticum DSM 571		16	16
Thermodesulfobium narugense DSM 14796		17	17
Coprothermobacter proteolyticus DSM 5265		6	6
Tepidanaerobacter acetatoxydans Re1		18	18
Thermoanaerobacter tengcongensis MB4		21	21
Carboxydothermus hydrogenoformans Z-2901		12	12
Moorella thermoacetica ATCC 39073		16	16
Ammonifex degensii KC4		21	21
Thermoanaerobacter mathranii subsp. mathranii str. A3		10	10
Thermoanaerobacter pseudethanolicus ATCC 33223		30	30
Thermoanaerobacter sp. X514		18	18
Thermoanaerobacter italicus Ab9		23	23
Thermoanaerobacter wiegelii Rt8.B1		32	32
Thermoanaerobacter brockii subsp. finnii Ako-1		24	24
Acetohalobium arabaticum DSM 5501		16	16
Halothermothrix orenii H 168		13	13
Halanaerobium hydrogeniformans		46	46
Halanaerobium praevalens DSM 2228		16	16
Carnobacterium sp. 17-4		9	9
Carnobacterium sp. WN1359		25	25
Aerococcus urinae ACS-120-V-Col10a		30	30
Tetragenococcus halophilus NBRC 12172		66	66
Melissococcus plutonius DAT561		6	6
Enterococcus sp. 7L76		11	11
Enterococcus hirae ATCC 9790		7	7
Enterococcus faecium Aus0004		38	38
Enterococcus faecalis 62		33	33
Weissella koreensis KACC 15510		8	8
Oenococcus oeni PSU-1		11	11
Leuconostoc sp. C2		11	11
Leuconostoc kimchii IMSNU 11154		17	17
Leuconostoc citreum KM20		23	23
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293		20	20
Leuconostoc gasicomitatum LMG 18811		19	19
Lactobacillus casei ATCC 334		81	81
Lactobacillus kefiranofaciens ZW3		21	21
Lactobacillus crispatus ST1		19	19
Lactobacillus rhamnosus Lc 705		13	13
Lactobacillus johnsonii FI9785		16	16
Lactobacillus sanfranciscensis TMW 1.1304		39	39
Lactobacillus salivarius CECT 5713		14	14
Lactobacillus ruminis ATCC 27782		25	25
Lactobacillus fermentum IFO 3956		57	57
Lactobacillus amylovorus GRL1118		22	22
Lactobacillus sakei subsp. sakei 23K		20	20
Lactobacillus reuteri DSM 20016		28	28
Lactobacillus gasseri ATCC 33323		8	8
Lactobacillus plantarum JDM1		14	14
Lactobacillus helveticus DPC 4571		25	25
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365		22	22
Lactobacillus buchneri NRRL B-30929		36	36
Lactobacillus buchneri		20	20
Lactobacillus brevis ATCC 367		33	33
Lactobacillus acidophilus 30SC		35	35
Pediococcus claussenii ATCC BAA-344		15	15
Pediococcus pentosaceus ATCC 25745		10	10
Lactococcus garvieae ATCC 49156		20	20
Lactococcus lactis subsp. cremoris MG1363		43	43
Streptococcus sp. I-P16		14	14
Streptococcus sp. I-G2		11	11
Streptococcus intermedius JTH08		9	9
Streptococcus gallolyticus UCN34		14	14
Streptococcus pseudopneumoniae IS7493		18	18
Streptococcus pasteurianus ATCC 43144		13	13
Streptococcus equi subsp. equi 4047		59	59
Streptococcus dysgalactiae subsp. equisimilis GGS_124		47	47
Streptococcus infantarius subsp. infantarius CJ18		33	33
Streptococcus macedonicus ACA-DC 198		41	41
Streptococcus mitis B6		55	55
Streptococcus uberis 0140J		8	8
Streptococcus parauberis KCTC 11537		14	14
Streptococcus parasanguinis ATCC 15912		10	10
Streptococcus pyogenes str. Manfredo		19	19
Streptococcus pneumoniae P1031		21	21
Streptococcus agalactiae A909		20	20
Streptococcus mutans NN2025		13	13
Streptococcus thermophilus LMD-9		21	21
Streptococcus suis P1/7		16	16
Streptococcus sanguinis SK36		9	9
Streptococcus salivarius 57.I		20	20
Streptococcus oralis Uo5		9	9
Streptococcus gordonii str. Challis substr. CH1		7	7
Exiguobacterium sp. MH3		10	10
Exiguobacterium sp. AT1b		12	12
Exiguobacterium sibiricum 255-15		25	25
Kyrpidia tusciae DSM 2912		22	22
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446		28	28
Brevibacillus brevis NBRC 100599		19	19
Paenibacillus sp. JDR-2		16	16
Paenibacillus terrae HPL-003		22	22
Paenibacillus mucilaginosus 3016		32	32
Paenibacillus polymyxa M1		26	26
Bacillus selenitireducens MLS10		22	22
Listeria welshimeri serovar 6b str. SLCC5334		10	10
Listeria innocua Clip11262		21	21
Listeria seeligeri serovar 1/2b str. SLCC3954		8	8
Listeria monocytogenes serotype 4b str. CLIP 80459		8	8
Listeria ivanovii subsp. ivanovii PAM 55		9	9
Solibacillus silvestris StLB046		14	14
Geobacillus thermoglucosidasius C56-YS93		41	41
Lysinibacillus sphaericus C3-41		19	19
Oceanobacillus iheyensis HTE831		11	11
Anoxybacillus flavithermus WK1		40	40
Geobacillus thermoleovorans CCB_US3_UF5		37	37
Geobacillus kaustophilus HTA426		40	40
Geobacillus sp. GHH01		42	42
Geobacillus sp. WCH70		60	60
Geobacillus thermodenitrificans NG80-2		23	23
Halobacillus halophilus DSM 2266		28	28
Bacillus sp. JS		11	11
Bacillus sp. 1NLA3E		30	30
Bacillus amyloliquefaciens FZB42		15	15
Bacillus atrophaeus 1942		14	14
Bacillus subtilis subsp. subtilis str. 168		11	11
Bacillus licheniformis DSM 13 = ATCC 14580		20	20
Bacillus halodurans C-125		27	27
Bacillus weihenstephanensis KBAB4		23	23
Bacillus thuringiensis str. Al Hakam		16	16
Bacillus cereus 03BB102		23	23
Bacillus anthracis str. A0248		14	14
Bacillus pseudofirmus OF4		33	33
Bacillus clausii KSM-K16		10	10
Bacillus cellulosilyticus DSM 2522		24	24
Bacillus pumilus SAFR-032		13	13
Bacillus megaterium DSM 319		13	13
Bacillus coagulans 2-6		24	24
Macrococcus caseolyticus JCSC5402		18	18
Staphylococcus pseudintermedius HKU10-03		12	12
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305		24	24
Staphylococcus lugdunensis HKU09-01		11	11
Staphylococcus haemolyticus JCSC1435		17	17
Staphylococcus epidermidis RP62A		16	16
Staphylococcus carnosus subsp. carnosus TM300		9	9
Staphylococcus aureus subsp. aureus JH1		17	17
Staphylococcus aureus		10	10
Candidatus Cloacamonas acidaminovorans		13	13
Gemmatimonas aurantiaca T-27		19	19
Melioribacter roseus P3M		14	14
Ignavibacterium album JCM 16511		18	18
Pelodictyon phaeoclathratiforme BU-1		18	18
Chlorobium luteolum DSM 273		12	12
Chlorobium chlorochromatii CaD3		6	6
Chlorobium phaeobacteroides DSM 266		43	43
Chlorobium phaeovibrioides DSM 265		15	15
Chlorobium limicola DSM 245		18	18
Chlorobaculum parvum NCIB 8327		9	9
Chlorobium tepidum TLS		10	10
Chloroherpeton thalassium ATCC 35110		11	11
Prosthecochloris aestuarii DSM 271		20	20
Haliscomenobacter hydrossis DSM 1100		30	30
Saprospira grandis str. Lewin		52	52
Niastella koreensis GR20-10		11	11
Chitinophaga pinensis DSM 2588		34	34
Salinibacter ruber M8		31	31
Rhodothermus marinus DSM 4252		12	12
Flexibacter litoralis DSM 6794		55	55
Candidatus Amoebophilus asiaticus 5a2		20	20
Candidatus Cardinium hertigii		36	36
Belliella baltica DSM 15883		47	47
Cyclobacterium marinum DSM 745		30	30
Marivirga tractuosa DSM 4126		16	16
Fibrella aestuarina		11	11
Leadbetterella byssophila DSM 17132		30	30
Dyadobacter fermentans DSM 18053		23	23
Cytophaga hutchinsonii ATCC 33406		20	20
Spirosoma linguale DSM 74		47	47
Runella slithyformis DSM 19594		26	26
Parabacteroides distasonis ATCC 8503		16	16
Tannerella forsythia ATCC 43037		19	19
Paludibacter propionicigenes WB4		12	12
Odoribacter splanchnicus DSM 20712		26	26
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2		5	5
Bacteroides sp. CF50		25	25
Prevotella melaninogenica ATCC 25845		16	15
Prevotella intermedia 17		33	33
Prevotella denticola F0289		12	12
Prevotella ruminicola 23		12	12
Porphyromonas asaccharolytica DSM 20707		19	19
Porphyromonas gingivalis ATCC 33277		9	9
Alistipes finegoldii DSM 17242		29	29
Bacteroides salanitronis DSM 18170		18	18
Bacteroides helcogenes P 36-108		10	10
Bacteroides vulgatus ATCC 8482		14	14
Bacteroides thetaiotaomicron VPI-5482		31	31
Bacteroides fragilis YCH46		12	12
Pedobacter saltans DSM 12145		19	19
Solitalea canadensis DSM 3403		16	16
Pedobacter heparinus DSM 2366		11	11
Sphingobacterium sp. 21		28	28
Fluviicola taffensis DSM 16823		11	11
Candidatus Sulcia muelleri DMIN		2	2
Candidatus Sulcia muelleri SMDSEM		2	2
Owenweeksia hongkongensis DSM 17368		23	23
Zunongwangia profunda SM-A87		40	40
Krokinobacter sp. 4H-3-7-5		13	13
Gramella forsetii KT0803		17	17
Lacinutrix sp. 5H-3-7-4		16	16
Maribacter sp. HTCC2170		12	12
Robiginitalea biformata HTCC2501		12	12
Croceibacter atlanticus HTCC2559		10	10
Aequorivita sublithincola DSM 14238		13	13
Zobellia galactanivorans		17	17
Muricauda ruestringensis DSM 13258		14	14
Cellulophaga algicola DSM 14237		24	24
Cellulophaga lytica DSM 7489		13	13
Flavobacteriaceae bacterium 3519-10		11	11
Polaribacter sp. MED152		11	11
Riemerella anatipestifer ATCC 11845 = DSM 15868		10	10
Ornithobacterium rhinotracheale DSM 15997		26	26
Capnocytophaga canimorsus Cc5		16	16
Capnocytophaga ochracea DSM 7271		10	10
Weeksella virosa DSM 16922		17	17
Flavobacterium indicum GPTSA100-9		16	16
Flavobacterium psychrophilum JIP02/86		20	20
Flavobacterium branchiophilum FL-15		14	14
Flavobacterium columnare ATCC 49512		21	21
Flavobacterium johnsoniae UW101		17	17
Blattabacterium sp. (Nauphoeta cinerea)		4	4
Blattabacterium sp. (Blattella germanica) str. Bge		4	4
Fibrobacter succinogenes subsp. succinogenes S85		12	12
Waddlia chondrophila WSU 86-1044		33	33
Candidatus Protochlamydia amoebophila UWE25		23	23
Parachlamydia acanthamoebae UV-7		16	16
Simkania negevensis Z		9	9
Chlamydophila pecorum E58		7	7
Chlamydia muridarum Nigg		7	7
Chlamydophila pneumoniae TW-183		7	7
Chlamydophila caviae GPIC		7	7
Chlamydophila felis Fe/C-56		7	7
Chlamydophila abortus S26/3		7	7
Chlamydia psittaci 01DC11		7	7
Chlamydia trachomatis B/Jali20/OT		7	7
Phycisphaera mikurensis NBRC 102666		8	7
Isosphaera pallida ATCC 43644		9	7
Planctomyces brasiliensis DSM 5305		11	11
Planctomyces limnophilus DSM 3776		11	10
Rhodopirellula baltica SH 1		47	47
Pirellula staleyi DSM 6068		11	11
Methylacidiphilum infernorum V4		6	6
Coraliomargarita akajimensis DSM 45221		9	9
Opitutus terrae PB90-1		17	17
Akkermansia muciniphila ATCC BAA-835		8	8
Fretibacterium fastidiosum		2	2
Thermovirga lienii DSM 17291		24	24
Aminobacterium colombiense DSM 12261		8	8
Thermanaerovibrio acidaminovorans DSM 6589		5	5
Anaerobaculum mobile DSM 13181		8	7
Turneriella parva DSM 21527		46	46
Leptospira borgpetersenii serovar Hardjo-bovis str. L550		35	35
Leptospira interrogans serovar Lai str. IPAV		24	24
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'		13	13
Brachyspira murdochii DSM 12563		7	7
Brachyspira intermedia PWS/A		7	7
Brachyspira pilosicoli 95/1000		6	6
Brachyspira hyodysenteriae WA1		6	6
Borrelia garinii PBi		3	3
Borrelia bissettii DN127		3	3
Borrelia afzelii PKo		3	3
Borrelia burgdorferi B31		3	3
Borrelia recurrentis A1		3	3
Borrelia duttonii Ly		3	3
Borrelia crocidurae str. Achema		3	3
Borrelia turicatae 91E135		4	4
Borrelia hermsii DAH		3	3
Spirochaeta smaragdinae DSM 11293		19	19
Sphaerochaeta pleomorpha str. Grapes		13	13
Sphaerochaeta globus str. Buddy		13	13
Sphaerochaeta coccoides DSM 17374		14	14
Spirochaeta caldaria DSM 7334		12	12
Treponema azotonutricium ZAS-9		28	28
Treponema primitia ZAS-2		16	16
Treponema brennaborense DSM 12168		6	6
Treponema paraluiscuniculi Cuniculi A		5	5
Treponema succinifaciens DSM 2489		17	17
Treponema pallidum subsp. pallidum SS14		10	10
Treponema denticola ATCC 35405		13	13
Spirochaeta africana DSM 8902		11	11
Spirochaeta thermophila DSM 6192		5	5
Thermodesulfatator indicus DSM 15286		5	5
Thermodesulfobacterium sp. OPB45		5	5
Desulfurispirillum indicum S5		21	21
Calditerrivibrio nitroreducens DSM 19672		17	17
Denitrovibrio acetiphilus DSM 12809		62	62
Deferribacter desulfuricans SSM1		10	10
Flexistipes sinusarabici DSM 4947		45	45
Marinitoga piezophila KA3		12	12
Petrotoga mobilis SJ95		10	10
Mesotoga prima MesG1.Ag.4.2		12	12
Kosmotoga olearia TBF 19.5.1		31	31
Fervidobacterium pennivorans DSM 9078		36	36
Fervidobacterium nodosum Rt17-B1		20	20
Thermosipho melanesiensis BI429		10	10
Thermosipho africanus TCF52B		37	37
Thermotoga lettingae TMO		9	9
Thermotoga thermarum DSM 5069		10	10
Thermotoga sp. RQ2		9	9
Thermotoga naphthophila RKU-10		10	10
Thermotoga petrophila RKU-1		9	9
Thermotoga neapolitana DSM 4359		10	10
Thermotoga maritima MSB8		9	9
Thermovibrio ammonificans HB-1		4	4
Desulfurobacterium thermolithotrophum DSM 11699		22	22
Sulfurihydrogenibium sp. YO3AOP1		12	12
Sulfurihydrogenibium azorense Az-Fu1		20	20
Persephonella marina EX-H1		11	11
Hydrogenobaculum sp. SN		6	6
Hydrogenobaculum sp. HO		6	6
Hydrogenobaculum sp. Y04AAS1		7	7
Thermocrinis albus DSM 14484		6	6
Aquifex aeolicus VF5		8	8
Hydrogenobacter thermophilus TK-6		9	9
Elusimicrobium minutum Pei191		6	6
uncultured Termite group 1 bacterium phylotype Rs-D17		6	6
Dictyoglomus turgidum DSM 6724		6	6
Dictyoglomus thermophilum H-6-12		6	6
Caldisericum exile AZM16c01		11	11
Candidatus Chloracidobacterium thermophilum B		8	8
Candidatus Solibacter usitatus Ellin6076		61	61
Granulicella tundricola MP5ACTX9		21	21
Granulicella mallensis MP5ACTX8		17	17
Candidatus Koribacter versatilis Ellin345		6	6
Terriglobus saanensis SP1PR4		12	12
Terriglobus roseus DSM 18391		8	8
Acidobacterium capsulatum ATCC 51196		24	24
Thermodesulfovibrio yellowstonii DSM 11347		11	11
Candidatus Nitrospira defluvii		31	31
Leptospirillum ferrooxidans C2-3		21	21
Streptobacillus moniliformis DSM 12112		10	9
Sebaldella termitidis ATCC 33386		8	8
Leptotrichia buccalis C-1013-b		8	8
Ilyobacter polytropus DSM 2926		17	17
Fusobacterium nucleatum subsp. nucleatum ATCC 25586		15	15
Candidatus Methylomirabilis oxyfera		18	18
candidate division WWE3 bacterium RAAC2_WWE3_1		5	5
candidate division SR1 bacterium RAAC1_SR1_1		8	8
Candidatus Saccharibacteria bacterium RAAC3_TM7_1		7	7
Candidatus Saccharimonas aalborgensis		8	8
Acidithiobacillus ferrivorans SS3		30	30
Acidithiobacillus caldus SM-1		37	37
Acidithiobacillus ferrooxidans ATCC 53993		27	27
Bacteriovorax marinus SJ		13	13
Bdellovibrio bacteriovorus HD100		10	10
Nautilia profundicola AmH		9	9
Nitratifractor salsuginis DSM 16511		14	14
Sulfurospirillum deleyianum DSM 6946		29	29
Sulfurospirillum barnesii SES-3		10	10
Arcobacter sp. L		21	21
Arcobacter nitrofigilis DSM 7299		11	11
Arcobacter butzleri RM4018		13	13
Campylobacter hominis ATCC BAA-381		8	8
Campylobacter lari RM2100		8	8
Campylobacter curvus 525.92		7	7
Campylobacter concisus 13826		4	4
Campylobacter jejuni subsp. doylei 269.97		6	6
Campylobacter sp. 03-427		7	7
Campylobacter fetus subsp. fetus 82-40		7	7
uncultured Sulfuricurvum sp. RIFRC-1		15	15
Sulfuricurvum kujiense DSM 16994		14	14
Sulfurimonas autotrophica DSM 16294		10	10
Sulfurimonas denitrificans DSM 1251		13	13
Wolinella succinogenes DSM 1740		23	23
Helicobacter cetorum MIT 00-7128		7	7
Helicobacter bizzozeronii CIII-1		6	6
Helicobacter hepaticus ATCC 51449		8	8
Helicobacter mustelae 12198		7	7
Helicobacter felis ATCC 49179		6	6
Helicobacter cinaedi PAGU611		7	7
Helicobacter acinonychis str. Sheeba		7	7
Helicobacter pylori B38		7	7
Nitratiruptor sp. SB155-2		15	15
Sulfurovum sp. NBC37-1		13	13
Desulfarculus baarsii DSM 2075		19	19
Desulfobacca acetoxidans DSM 11109		16	16
Syntrophus aciditrophicus SB		13	13
Desulfomonile tiedjei DSM 6799		43	43
Syntrophobacter fumaroxidans MPOB		18	18
Desulfurivibrio alkaliphilus AHT2		22	22
Desulfotalea psychrophila LSv54		11	11
Desulfobulbus propionicus DSM 2032		20	20
Desulfatibacillum alkenivorans AK-01		40	40
Desulfobacterium autotrophicum HRM2		33	33
Desulfococcus oleovorans Hxd3		9	9
Desulfohalobium retbaense DSM 5692		12	12
Desulfomicrobium baculatum DSM 4028		18	18
Desulfovibrio piezophilus		19	19
Desulfovibrio aespoeensis Aspo-2		28	28
Lawsonia intracellularis PHE/MN1-00		6	6
Desulfovibrio magneticus RS-1		18	18
Desulfovibrio alaskensis G20		35	35
Desulfovibrio vulgaris subsp. vulgaris DP4		12	12
Desulfovibrio salexigens DSM 2638		9	9
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774		13	13
Desulfovibrio africanus str. Walvis Bay		10	10
Hippea maritima DSM 10411		19	19
Geobacter daltonii FRC-32		9	9
Geobacter sp. M21		21	21
Geobacter uraniireducens Rf4		55	55
Geobacter lovleyi SZ		33	33
Geobacter bemidjiensis Bem		17	17
Geobacter sulfurreducens KN400		15	15
Geobacter metallireducens GS-15		35	35
Pelobacter propionicus DSM 2379		33	33
Pelobacter carbinolicus DSM 2380		30	30
Babela massiliensis		6	6
Haliangium ochraceum DSM 14365		44	44
Sorangium cellulosum 'So ce 56'		46	46
Anaeromyxobacter sp. Fw109-5		19	19
Anaeromyxobacter dehalogenans 2CP-1		17	17
Stigmatella aurantiaca DW4/3-1		34	34
Corallococcus coralloides DSM 2259		28	28
Myxococcus xanthus DK 1622		37	37
Myxococcus fulvus HW-1		54	52
Dechloromonas aromatica RCB		26	26
Thauera sp. MZ1T		33	33
Azoarcus sp. KH32C		23	23
Azoarcus sp. BH72		14	14
Aromatoleum aromaticum EbN1		79	79
Dechlorosoma suillum PS		23	23
Pseudogulbenkiania sp. NH8B		23	23
Laribacter hongkongensis HLHK9		22	22
Chromobacterium violaceum ATCC 12472		18	18
Neisseria meningitidis alpha14		10	10
Neisseria meningitidis FAM18		22	22
Neisseria lactamica 020-06		21	21
Neisseria gonorrhoeae NCCP11945		15	15
syncytium symbiont of Diaphorina citri		4	4
Candidatus Accumulibacter phosphatis clade IIA str. UW-1		83	83
Candidatus Tremblaya princeps PCIT		1	1
beta proteobacterium CB		15	15
Methylibium petroleiphilum PM1		21	21
Thiomonas arsenitoxydans		22	22
Thiomonas intermedia K12		28	28
Rubrivivax gelatinosus IL144		17	17
Leptothrix cholodnii SP-6		29	29
Burkholderia rhizoxinica HKI 454		46	46
Burkholderia phytofirmans PsJN		32	32
Burkholderia phymatum STM815		36	36
Burkholderia xenovorans LB400		58	58
Ralstonia eutropha JMP134		17	17
Cupriavidus taiwanensis LMG 19424		49	49
Cupriavidus metallidurans CH34		71	71
Cupriavidus necator N-1		59	59
Ralstonia eutropha H16		25	25
Ralstonia pickettii 12D		27	27
Ralstonia solanacearum CFBP2957		23	23
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1		16	16
Burkholderia sp. RPE64		17	17
Burkholderia sp. CCGE1002		31	31
Burkholderia thailandensis E264		24	24
Burkholderia pseudomallei 1106a		28	28
Burkholderia mallei SAVP1		93	93
Burkholderia ambifaria AMMD		23	23
Burkholderia cenocepacia HI2424		28	28
Burkholderia multivorans ATCC 17616		49	49
Burkholderia vietnamiensis G4		107	107
Burkholderia gladioli BSR3		47	47
Burkholderia glumae BGR1		52	52
Verminephrobacter eiseniae EF01-2		47	47
Alicycliphilus denitrificans K601		38	38
Ramlibacter tataouinensis TTB310		11	11
Delftia sp. Cs1-4		20	20
Delftia acidovorans SPH-1		28	28
Polaromonas sp. JS666		41	41
Polaromonas naphthalenivorans CJ2		50	50
Variovorax paradoxus S110		18	18
Rhodoferax ferrireducens T118		16	16
Acidovorax ebreus TPSY		21	21
Acidovorax sp. KKS102		36	36
Acidovorax sp. JS42		48	48
Acidovorax citrulli AAC00-1		60	60
Acidovorax avenae subsp. avenae ATCC 19860		12	12
Comamonas testosteroni CNB-2		25	25
Candidatus Zinderia insecticola CARI		2	2
Herminiimonas arsenicoxydans		25	25
Collimonas fungivorans Ter331		13	13
Janthinobacterium sp. Marseille		24	24
Herbaspirillum seropedicae SmR1		12	12
Pusillimonas sp. T7-7		16	16
Advenella kashmirensis WT001		9	9
Taylorella asinigenitalis MCE3		8	8
Taylorella equigenitalis MCE9		8	8
Bordetella petrii DSM 12804		74	74
Bordetella avium 197N		11	11
Bordetella pertussis Tohama I		228	228
Bordetella parapertussis 12822		21	21
Bordetella bronchiseptica RB50		14	14
Achromobacter xylosoxidans A8		20	20
Achromobacter xylosoxidans		13	13
Thiobacillus denitrificans ATCC 25259		12	12
Nitrosospira multiformis ATCC 25196		58	58
Nitrosomonas sp. Is79A3		42	42
Nitrosomonas eutropha C91		63	62
Nitrosomonas europaea ATCC 19718		66	66
Sideroxydans lithotrophicus ES-1		14	14
Gallionella capsiferriformans ES-2		29	29
Methylotenera versatilis 301		8	8
Methylotenera mobilis JLW8		11	11
Methylovorus sp. MP688		9	9
Methylovorus glucosetrophus SIP3-4		10	10
Methylobacillus flagellatus KT		12	12
Magnetococcus marinus MC-1		81	81
Parvularcula bermudensis HTCC2503		15	15
Asticcacaulis excentricus CB 48		17	17
Brevundimonas subvibrioides ATCC 15264		9	9
Caulobacter sp. K31		45	45
Caulobacter crescentus NA1000		17	17
Caulobacter segnis ATCC 21756		11	11
Phenylobacterium zucineum HLK1		21	21
Erythrobacter litoralis HTCC2594		19	19
Sphingopyxis alaskensis RB2256		19	19
Novosphingobium sp. PP1Y		31	31
Novosphingobium aromaticivorans DSM 12444		18	18
Sphingobium sp. SYK-6		24	24
Sphingobium japonicum UT26S		37	37
Sphingobium chlorophenolicum L-1		19	19
Sphingomonas sp. MM-1		58	58
Sphingomonas wittichii RW1		29	29
Zymomonas mobilis subsp. mobilis NCIMB 11163		10	10
Maricaulis maris MCS10		13	13
Hirschia baltica ATCC 49814		13	12
Hyphomonas neptunium ATCC 15444		16	16
Dinoroseobacter shibae DFL 12		29	29
Phaeobacter gallaeciensis 2.10		20	20
Pseudovibrio sp. FO-BEG1		19	19
Jannaschia sp. CCS1		16	16
Ruegeria sp. TM1040		18	18
Ruegeria pomeroyi DSS-3		17	17
Ketogulonicigenium vulgare Y25		15	15
Ketogulonigenium vulgarum WSH-001		13	13
Roseobacter litoralis Och 149		21	21
Roseobacter denitrificans OCh 114		29	29
Rhodobacter sphaeroides ATCC 17029		20	20
Rhodobacter capsulatus SB 1003		16	16
Paracoccus denitrificans PD1222		21	21
Rhodospirillum photometricum DSM 122		13	13
Tistrella mobilis KA081020-065		14	14
Magnetospirillum magneticum AMB-1		38	38
Rhodospirillum centenum SW		13	13
Rhodospirillum rubrum F11		10	10
Azospirillum lipoferum 4B		16	16
Azospirillum sp. B510		86	86
Azospirillum brasilense Sp245		21	21
Gluconacetobacter xylinus NBRC 3288		37	37
Granulibacter bethesdensis CGDNIH1		12	12
Gluconacetobacter diazotrophicus PAl 5		62	62
Acidiphilium multivorum AIU301		37	37
Acidiphilium cryptum JF-5		36	36
Gluconobacter oxydans 621H		49	49
Acetobacter pasteurianus IFO 3283-01		137	137
Polymorphum gilvum SL003B-26A1		42	42
Micavibrio aeruginosavorus ARL-13		10	10
Candidatus Puniceispirillum marinum IMCC1322		10	10
alpha proteobacterium HIMB5		8	8
alpha proteobacterium HIMB59		8	8
Candidatus Pelagibacter sp. IMCC9063		9	9
Candidatus Midichloria mitochondrii IricVA		8	8
Neorickettsia sennetsu str. Miyayama		8	8
Neorickettsia risticii str. Illinois		8	8
Wolbachia endosymbiont of Culex quinquefasciatus Pel		62	62
Wolbachia sp. wRi		20	20
Ehrlichia chaffeensis str. Arkansas		8	8
Ehrlichia canis str. Jake		9	9
Ehrlichia ruminantium str. Gardel		9	9
Anaplasma phagocytophilum HZ		9	9
Anaplasma marginale str. Florida		9	9
Anaplasma centrale str. Israel		9	9
Orientia tsutsugamushi str. Boryong		7	7
Rickettsia bellii OSU 85-389		6	6
Rickettsia canadensis str. McKiel		8	8
Rickettsia typhi str. Wilmington		7	7
Rickettsia prowazekii str. BuV67-CWPP		7	7
Rickettsia philipii str. 364D		7	7
Rickettsia heilongjiangensis 054		7	7
Rickettsia peacockii str. Rustic		38	38
Rickettsia felis URRWXCal2		19	19
Rickettsia slovaca 13-B		7	7
Rickettsia parkeri str. Portsmouth		7	7
Rickettsia massiliae MTU5		12	12
Rickettsia japonica YH		7	7
Rickettsia africae ESF-5		7	7
Rickettsia rhipicephali str. 3-7-female6-CWPP		9	9
Rickettsia montanensis str. OSU 85-930		7	7
Candidatus Rickettsia amblyommii str. GAT-30V		11	11
Rickettsia australis str. Cutlack		8	8
Rickettsia akari str. Hartford		9	9
Rickettsia rickettsii str. 'Sheila Smith'		8	8
Rickettsia conorii str. Malish 7		7	7
Starkeya novella DSM 506		10	10
Xanthobacter autotrophicus Py2		39	39
Azorhizobium caulinodans ORS 571		29	29
Methylobacterium chloromethanicum CM4		34	34
Methylobacterium extorquens AM1		19	19
Methylobacterium sp. 4-46		55	55
Methylobacterium populi BJ001		36	36
Methylobacterium nodulans ORS 2060		32	32
Methylobacterium radiotolerans JCM 2831		27	27
Parvibaculum lavamentivorans DS-1		11	11
Candidatus Hodgkinia cicadicola Dsem		1	1
Ochrobactrum anthropi ATCC 49188		34	34
Brucella microti CCM 4915		19	19
Brucella pinnipedialis B2/94		22	22
Brucella canis ATCC 23365		23	23
Brucella suis ATCC 23445		21	21
Brucella melitensis ATCC 23457		19	19
Brucella ovis ATCC 25840		18	18
Brucella abortus S19		19	19
Sinorhizobium fredii NGR234		47	47
Sinorhizobium medicae WSM419		35	35
Sinorhizobium meliloti AK83		34	34
Genome sequence of Rhizobium sp. strain IRBG74		25	25
Rhizobium etli CIAT 652		12	12
Rhizobium leguminosarum bv. viciae 3841		29	29
Agrobacterium tumefaciens str. C58		22	22
Agrobacterium radiobacter K84		17	17
Agrobacterium sp. H13-3		19	19
Agrobacterium vitis S4		29	29
Candidatus Liberibacter asiaticus str. psy62		10	10
Mesorhizobium sp. BNC1		19	19
Mesorhizobium opportunistum WSM2075		10	10
Mesorhizobium ciceri biovar biserrulae WSM1271		13	13
Mesorhizobium loti MAFF303099		33	33
Methylocella silvestris BL2		12	12
Beijerinckia indica subsp. indica ATCC 9039		11	11
Pelagibacterium halotolerans B2		16	16
Rhodomicrobium vannielii ATCC 17100		37	37
Hyphomicrobium sp. MC1		13	13
Hyphomicrobium denitrificans ATCC 51888		11	11
Oligotropha carboxidovorans OM4		20	20
Rhodopseudomonas palustris BisA53		16	16
Nitrobacter winogradskyi Nb-255		61	61
Nitrobacter hamburgensis X14		42	42
Bradyrhizobium japonicum USDA 110		76	76
Bradyrhizobium sp. ORS 278		16	16
Methylocystis sp. SC2		10	10
Bartonella tribocorum CIP 105476		18	18
Bartonella clarridgeiae 73		8	8
Bartonella henselae str. Houston-1		11	11
Bartonella grahamii as4aup		11	11
Bartonella quintana str. Toulouse		8	8
Bartonella bacilliformis KC583		8	8
Saccharophagus degradans 2-40		17	17
Teredinibacter turnerae T7901		19	19
Cellvibrio japonicus Ueda107		41	41
Aggregatibacter aphrophilus NJ8700		13	13
Aggregatibacter actinomycetemcomitans D7S-1		34	34
Haemophilus somnus 129PT		12	12
Gallibacterium anatis UMN179		32	32
Pasteurella multocida subsp. multocida str. 3480		13	13
Haemophilus parasuis SH0165		14	14
Haemophilus ducreyi 35000HP		12	12
Haemophilus parainfluenzae T3T1		15	15
Haemophilus influenzae PittEE		15	15
Actinobacillus succinogenes 130Z		13	13
Actinobacillus pleuropneumoniae serovar 5b str. L20		21	21
Oceanimonas sp. GK1		35	35
Tolumonas auensis DSM 9187		19	19
Aeromonas veronii B565		23	23
Aeromonas salmonicida subsp. salmonicida A449		58	58
Aeromonas hydrophila subsp. hydrophila ATCC 7966		13	13
Aliivibrio salmonicida LFI1238		67	67
Vibrio fischeri MJ11		20	20
Vibrio sp. Ex25		21	21
Vibrio harveyi ATCC BAA-1116		300	300
Vibrio parahaemolyticus RIMD 2210633		24	24
Vibrio splendidus LGP32		32	32
Vibrio anguillarum 775		26	26
Vibrio furnissii NCTC 11218		22	22
Vibrio vulnificus MO6-24/O		27	27
Vibrio cholerae O395		26	26
Photobacterium profundum SS9		150	150
Psychromonas ingrahamii 37		24	24
Psychromonas sp. CNPT3		18	18
Idiomarina loihiensis L2TR		24	24
Ferrimonas balearica DSM 9799		16	16
Shewanella piezotolerans WP3		30	30
Shewanella loihica PV-4		18	18
Shewanella halifaxensis HAW-EB4		19	19
Shewanella sediminis HAW-EB3		22	22
Shewanella denitrificans OS217		40	40
Shewanella pealeana ATCC 700345		38	38
Shewanella oneidensis MR-1		98	98
Shewanella baltica OS185		38	38
Shewanella woodyi ATCC 51908		21	21
Shewanella sp. MR-4		25	25
Shewanella amazonensis SB2B		14	14
Shewanella violacea DSS12		19	19
Shewanella frigidimarina NCIMB 400		38	38
Shewanella putrefaciens CN-32		28	28
Colwellia psychrerythraea 34H		23	23
Pseudoalteromonas sp. SM9913		28	28
Pseudoalteromonas atlantica T6c		28	28
Pseudoalteromonas haloplanktis TAC125		18	18
Glaciecola sp. 4H-3-7+YE-5		23	23
Glaciecola nitratireducens FR1064		15	15
Marinobacter adhaerens HP15		22	22
Marinobacter sp. BSs20148		25	25
Marinobacter hydrocarbonoclasticus ATCC 49840		19	19
Marinobacter aquaeolei VT8		59	59
Alteromonas sp. SN2		35	35
Alteromonas macleodii str. 'Deep ecotype'		30	30
Kangiella koreensis DSM 16069		12	12
Hahella chejuensis KCTC 2396		32	32
Alcanivorax borkumensis SK2		16	16
Marinomonas posidonica IVIA-Po-181		14	14
Marinomonas sp. MWYL1		32	32
Marinomonas mediterranea MMB-1		19	19
Candidatus Carsonella ruddii PV		1	1
Chromohalobacter salexigens DSM 3043		14	14
Halomonas elongata DSM 2581		15	15
Methylomicrobium alcaliphilum		45	45
Methylomonas methanica MC09		78	78
Methylococcus capsulatus str. Bath		23	23
Dichelobacter nodosus VCS1703A		10	10
Rhodanobacter denitrificans		23	23
Frateuria aurantia DSM 6220		18	18
Pseudoxanthomonas spadix BD-a59		15	15
Pseudoxanthomonas suwonensis 11-1		15	15
Stenotrophomonas maltophilia K279a		34	34
Xylella fastidiosa M23		13	13
Xanthomonas axonopodis pv. citri str. 306		59	59
Xanthomonas albilineans GPE PC73		38	38
Xanthomonas oryzae pv. oryzae PXO99A		214	212
Xanthomonas campestris pv. campestris str. B100		54	54
Halothiobacillus neapolitanus c2		15	15
Spiribacter sp. UAH-SP71		12	12
Alkalilimnicola ehrlichii MLHE-1		23	23
Thioalkalivibrio sulfidophilus HL-EbGr7		22	22
Thioalkalivibrio sp. K90mix		22	22
Halorhodospira halophila SL1		22	22
Allochromatium vinosum DSM 180		23	23
Thiocystis violascens DSM 198		53	53
Nitrosococcus watsonii C-113		10	10
Nitrosococcus halophilus Nc4		37	37
Nitrosococcus oceani ATCC 19707		12	12
Coxiella burnetii Dugway 5J108-111		16	16
Legionella longbeachae NSW150		21	21
Legionella pneumophila str. Corby		18	18
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)		5	5
gamma proteobacterium HdN1		16	16
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)		7	7
Candidatus Vesicomyosocius okutanii HA		7	7
Photorhabdus asymbiotica		32	32
Photorhabdus luminescens subsp. laumondii TTO1		80	80
Xenorhabdus bovienii SS-2004		72	72
Xenorhabdus nematophila ATCC 19061		101	101
Providencia stuartii MRSN 2154		27	27
Proteus mirabilis HI4320		14	14
Edwardsiella ictaluri 93-146		27	27
Edwardsiella tarda EIB202		29	29
Rahnella sp. Y9602		28	28
Rahnella aquatilis CIP 78.65 = ATCC 33071		23	23
Yersinia pseudotuberculosis IP 31758		15	15
Yersinia pestis Pestoides F		58	58
Yersinia enterocolitica subsp. enterocolitica 8081		49	49
Serratia sp. AS12		19	19
Serratia symbiotica str. 'Cinara cedri'		7	7
Serratia sp. ATCC 39006		24	24
Serratia plymuthica AS9		19	19
Serratia proteamaculans 568		24	24
Dickeya dadantii Ech703		19	19
Dickeya zeae Ech1591		34	34
Pectobacterium wasabiae WPP163		15	15
Pectobacterium sp. SCC3193		25	25
Pectobacterium atrosepticum SCRI1043		18	18
Pectobacterium carotovorum subsp. carotovorum PC1		14	14
Sodalis glossinidius str. 'morsitans'		14	14
Halyomorpha halys symbiont		8	8
Pantoea sp. At-9b		23	23
Pantoea vagans C9-1		15	15
Pantoea ananatis LMG 20103		17	17
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis		6	6
Buchnera aphidicola BCc		6	6
Erwinia tasmaniensis Et1/99		17	17
Erwinia sp. Ejp617		44	44
Erwinia billingiae Eb661		24	24
Erwinia pyrifoliae Ep1/96		41	41
Erwinia amylovora ATCC 49946		17	17
Escherichia blattae DSM 4481		46	46
Candidatus Moranella endobia PCIT		7	7
Cronobacter turicensis z3032		16	16
Cronobacter sakazakii ES15		15	15
Candidatus Riesia pediculicola USDA		4	4
secondary endosymbiont of Ctenarytaina eucalypti		7	7
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)		24	24
Candidatus Blochmannia floridanus		8	8
Enterobacteriaceae bacterium strain FGI 57		18	18
Shigella sonnei Ss046		236	236
Shigella flexneri 5 str. 8401		152	152
Shigella dysenteriae Sd197		163	163
Shigella boydii CDC 3083-94		124	124
Salmonella bongori NCTC 12419		15	15
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594		33	33
Klebsiella oxytoca E718		52	52
Klebsiella variicola At-22		13	13
Klebsiella pneumoniae NTUH-K2044		31	31
Enterobacter aerogenes KCTC 2190		22	22
Escherichia fergusonii ATCC 35469		25	25
Escherichia coli 'BL21-Gold(DE3)pLysS AG'		36	36
Enterobacter sp. R4-368		23	23
Enterobacter sp. 638		23	23
Enterobacter asburiae LF7a		17	17
Enterobacter cloacae subsp. dissolvens SDM		14	14
Citrobacter rodentium ICC168		42	42
Citrobacter koseri ATCC BAA-895		14	14
Azotobacter vinelandii DJ		47	47
Pseudomonas sp. TKP		37	37
Pseudomonas sp. UW4		23	23
Pseudomonas brassicacearum subsp. brassicacearum NFM421		17	17
Pseudomonas entomophila L48		20	20
Pseudomonas syringae pv. tomato str. DC3000		51	51
Pseudomonas stutzeri A1501		35	35
Pseudomonas fulva 12-X		18	18
Pseudomonas putida F1		18	18
Pseudomonas protegens Pf-5		15	15
Pseudomonas fluorescens SBW25		22	22
Pseudomonas mendocina ymp		18	18
Pseudomonas aeruginosa UCBPP-PA14		23	23
Pseudomonas sp. VLB120		17	17
Psychrobacter sp. G		17	16
Psychrobacter sp. PRwf-1		37	37
Psychrobacter arcticus 273-4		30	29
Psychrobacter cryohalolentis K5		26	25
Moraxella catarrhalis RH4		11	10
Acinetobacter oleivorans DR1		14	13
Acinetobacter calcoaceticus PHEA-2		13	12
Acinetobacter baumannii ATCC 17978		18	17
Acinetobacter sp. ADP1		19	18
Methylophaga sp. JAM1		28	28
Cycloclasticus sp. P1		10	10
Thiomicrospira crunogena XCL-2		19	19
Thioalkalimicrobium cyclicum ALM1		14	14
Francisella noatunensis subsp. orientalis str. Toba 04		8	8
Francisella sp. TX077308		9	9
Francisella philomiragia subsp. philomiragia ATCC 25017		55	55
Francisella tularensis subsp. tularensis WY96-3418		58	58
Francisella cf. novicida 3523		11	11
Francisella novicida U112		10	10
Nanoarchaeum equitans Kin4-M		2	2
Candidatus Caldiarchaeum subterraneum		5	5
Cenarchaeum symbiosum A		5	5
Candidatus Nitrosopumilus sp. AR2		3	3
Nitrosopumilus maritimus SCM1		3	3
Candidatus Korarchaeum cryptofilum OPF8		6	6
Acidilobus saccharovorans 345-15		3	3
Fervidicoccus fontis Kam940		4	4
Pyrolobus fumarii 1A		3	3
Hyperthermus butylicus DSM 5456		3	3
Thermogladius cellulolyticus 1633		4	4
Ignisphaera aggregans DSM 17230		5	5
Aeropyrum pernix K1		3	3
Ignicoccus hospitalis KIN4/I		4	4
Thermosphaera aggregans DSM 11486		3	3
Staphylothermus hellenicus DSM 12710		3	3
Staphylothermus marinus F1		3	3
Desulfurococcus fermentans DSM 16532		3	3
Desulfurococcus kamchatkensis 1221n		3	3
Desulfurococcus mucosus DSM 2162		3	3
Metallosphaera cuprina Ar-4		4	4
Metallosphaera sedula DSM 5348		5	5
Acidianus hospitalis W1		4	4
Sulfolobus tokodaii str. 7		10	10
Sulfolobus islandicus Y.N.15.51		7	7
Sulfolobus solfataricus P2		61	61
Sulfolobus acidocaldarius DSM 639		4	4
Thermofilum sp. 1910b		4	4
Thermofilum pendens Hrk 5		3	3
Vulcanisaeta moutnovskia 768-28		5	5
Vulcanisaeta distributa DSM 14429		4	4
Caldivirga maquilingensis IC-167		4	4
Pyrobaculum sp. 1860		5	5
Pyrobaculum calidifontis JCM 11548		4	4
Pyrobaculum arsenaticum DSM 13514		5	5
Pyrobaculum oguniense TE7		4	4
Thermoproteus neutrophilus V24Sta		4	4
Pyrobaculum aerophilum str. IM2		4	4
Pyrobaculum islandicum DSM 4184		4	4
Thermoproteus uzoniensis 768-20		5	5
Thermoproteus tenax Kra 1		4	4
halophilic archaeon DL31		19	19
Methanocella arvoryzae MRE50		20	20
Methanocella conradii HZ254		8	8
Methanocella paludicola SANAE		18	18
Methanosaeta harundinacea 6Ac		6	6
Methanosaeta thermophila PT		3	3
Methanosaeta concilii GP6		45	45
Methanosalsum zhilinae DSM 4017		7	7
Methanohalobium evestigatum Z-7303		8	8
Methanococcoides burtonii DSM 6242		4	4
Methanosarcina acetivorans C2A		55	55
Methanosarcina mazei Go1		20	20
Methanosarcina barkeri str. Fusaro		24	24
Methanohalophilus mahii DSM 5219		5	5
Methanosphaerula palustris E1-9c		5	5
Methanoregula boonei 6A8		8	8
Methanospirillum hungatei JF-1		25	25
Methanocorpusculum labreanum Z		4	4
Methanoplanus petrolearius DSM 11571		2	2
Methanoculleus bourgensis MS2		10	10
Methanoculleus marisnigri JR1		4	4
Methanopyrus kandleri AV19		3	3
Ferroglobus placidus DSM 10642		6	6
Archaeoglobus profundus DSM 5631		4	4
Archaeoglobus veneficus SNP6		30	30
Archaeoglobus fulgidus DSM 4304		13	13
Thermococcus sp. 4557		3	3
Thermococcus onnurineus NA1		3	3
Thermococcus kodakarensis KOD1		2	2
Thermococcus gammatolerans EJ3		2	2
Thermococcus sibiricus MM 739		3	3
Thermococcus barophilus MP		3	3
Pyrococcus sp. ST04		2	2
Pyrococcus yayanosii CH1		3	3
Pyrococcus horikoshii OT3		2	2
Pyrococcus abyssi GE5		2	2
Pyrococcus furiosus COM1		34	34
Thermoplasmatales archaeon BRNA1		7	7
Thermoplasma volcanium GSS1		8	8
Thermoplasma acidophilum DSM 1728		3	3
Picrophilus torridus DSM 9790		2	2
Salinarchaeum sp. Harcht-Bsk1		6	6
Halopiger xanaduensis SH-6		10	10
Haloterrigena turkmenica DSM 5511		12	12
Natrinema sp. J7-2		16	16
Natrialba magadii ATCC 43099		11	10
Halorubrum lacusprofundi ATCC 49239		20	20
Haloquadratum walsbyi DSM 16790		14	13
Halogeometricum borinquense DSM 11551		18	18
Haloferax mediterranei ATCC 33500		16	15
Haloferax volcanii DS2		30	30
Halomicrobium mukohataei DSM 12286		10	10
Halorhabdus utahensis DSM 12940		6	5
Natronomonas pharaonis DSM 2160		7	7
Haloarcula hispanica ATCC 33960		12	12
Haloarcula marismortui ATCC 43049		22	22
Halalkalicoccus jeotgali B3		10	10
Halobacterium salinarum R1		33	33
Halobacterium sp. NRC-1		33	33
Methanotorris igneus Kol 5		12	12
Methanocaldococcus sp. FS406-22		3	3
Methanocaldococcus fervens AG86		4	4
Methanocaldococcus vulcanius M7		2	2
methanocaldococcus infernus ME		2	2
Methanocaldococcus jannaschii DSM 2661		6	6
Methanothermococcus okinawensis IH1		2	2
Methanococcus aeolicus Nankai-3		3	3
Methanococcus maripaludis C5		6	6
Methanococcus voltae A3		2	2
Methanococcus vannielii SB		5	5
Methanothermus fervidus DSM 2088		2	2
Methanothermobacter marburgensis str. Marburg		4	4
Methanothermobacter thermautotrophicus str. Delta H		3	3
Methanosphaera stadtmanae DSM 3091		5	5
Methanobrevibacter sp. AbM4		4	4
Methanobrevibacter ruminantium M1		9	9
Methanobrevibacter smithii ATCC 35061		6	6
Complete genome sequence of Methanobacterium sp. Mb1		6	6
Aciduliprofundum sp. MAR08-339		3	3
Aciduliprofundum boonei T469		4	4
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)	Tropical clawed frog	219	216
Drosophila melanogaster FlyBase 5.12 (FlyBase)	Fruit fly	59	58
Anopheles gambiae VectorBase AgamP3.6 (VectorBase)	African malaria mosquito	36	35
Ascaris suum Victoria/Ghent	Pig roundworm	52	48
Caenorhabditis elegans WormBase WS218 (WormBase)	Roundworm	111	106
Cryptococcus neoformans var. grubii H99		21	20
Cryptococcus neoformans B-3501A		40	39
Cryptococcus neoformans JEC21		26	25
Paracoccidioides brasiliensis Pb01		42	41
Paracoccidioides brasiliensis Pb03		24	23
Coccidioides posadasii str. Silveira		27	26
Coccidioides immitis RMSCC 3703		24	23
Coccidioides immitis RMSCC 2394		27	26
Coccidioides immitis H538.4		25	24
Ajellomyces dermatitidis ER-3		28	27
Histoplasma capsulatum H143		26	26
Histoplasma capsulatum H88		29	28
Histoplasma capsulatum G186AR		27	26
Aspergillus fumigatus A1163		27	26
Candida albicans WO-1		25	24
Saccharomyces cerevisiae UC5		18	17
Saccharomyces cerevisiae PW5		20	19
Saccharomyces cerevisiae FL100		9	9
Saccharomyces cerevisiae CLIB324		6	6
Saccharomyces cerevisiae CBS7960		23	22
Saccharomyces cerevisiae YJM269		22	21
Saccharomyces cerevisiae T7		21	20
Saccharomyces cerevisiae FostersB		20	20
Saccharomyces cerevisiae FostersO		19	18
Saccharomyces cerevisiae VL3		27	27
Saccharomyces cerevisiae Vin13		25	25
Saccharomyces cerevisiae LalvinQA23		30	29
Saccharomyces cerevisiae AWRI796		17	17
Saccharomyces cerevisiae Sigma1278b		39	38
Saccharomyces cerevisiae W303		25	24
Saccharomyces cerevisiae JAY291		22	21
Saccharomyces cerevisiae AWRI1631		11	10
Saccharomyces cerevisiae YPS163		7	7
Saccharomyces cerevisiae M22		5	5
Saccharomyces cerevisi