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LDL receptor-like module superfamily domain assignments
in
Oryctolagus cuniculus 76_2

Assignment details

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Oryctolagus cuniculus 76_2 has 225 significant domains in 50 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000000568   0.000000000034   29-67   LDL receptor-like module  
  0.000000000301   220-258   LDL receptor-like module  
  0.000000000353   185-217   LDL receptor-like module  
  0.000000000995   152-184   LDL receptor-like module  
  0.000000131   69-107   LDL receptor-like module  
  0.000825   120-149   LDL receptor-like module  
ENSOCUP00000000653   0.00000000236   23-63   LDL receptor-like module  
ENSOCUP00000000943   0.0000484   436-468   LDL receptor-like module  
ENSOCUP00000001048   0.000000183   26-63   LDL receptor-like module  
ENSOCUP00000001666   0.0000000114   140-173   LDL receptor-like module  
ENSOCUP00000001777   0.00000000000668   264-304   LDL receptor-like module  
  0.000000000196   143-183   LDL receptor-like module  
  0.000000000353   309-345   LDL receptor-like module  
  0.000000000458   228-266   LDL receptor-like module  
  0.000000000511   68-106   LDL receptor-like module  
  0.00000000497   104-142   LDL receptor-like module  
  0.0000000072   187-225   LDL receptor-like module  
  0.00000157   26-68   LDL receptor-like module  
ENSOCUP00000001926   0.00000000000183   234-274   LDL receptor-like module  
  0.00000000000576   31-68   LDL receptor-like module  
  0.0000000000249   148-188   LDL receptor-like module  
  0.0000000000445   272-312   LDL receptor-like module  
  0.000000000183   70-108   LDL receptor-like module  
  0.000000000916   187-225   LDL receptor-like module  
  0.00000000406   107-149   LDL receptor-like module  
  0.0000000353   318-355   LDL receptor-like module  
ENSOCUP00000001939   0.000000000017   449-487   LDL receptor-like module  
  0.00000000209   163-199   LDL receptor-like module  
  0.000000128   410-448   LDL receptor-like module  
  0.000000183   211-253   LDL receptor-like module  
  0.000000733   373-410   LDL receptor-like module  
ENSOCUP00000002615   0.000000000668   1325-1363   LDL receptor-like module  
  0.0000000013   1246-1286   LDL receptor-like module  
  0.0000000038   1287-1323   LDL receptor-like module  
ENSOCUP00000003376   0.00000000602   264-300   LDL receptor-like module  
  0.000000157   229-261   LDL receptor-like module  
ENSOCUP00000004665   0.0000523   78-119   LDL receptor-like module  
ENSOCUP00000004864   0.0000000772   14-48   LDL receptor-like module  
ENSOCUP00000006636   0.0000000327   291-327   LDL receptor-like module  
ENSOCUP00000006827   0.00000000223   1566-1602   LDL receptor-like module  
  0.00000000223   2222-2262   LDL receptor-like module  
  0.00000000432   1419-1455   LDL receptor-like module  
  0.0000000119   2453-2490   LDL receptor-like module  
  0.0000000471   1378-1414   LDL receptor-like module  
  0.0000000524   1494-1532   LDL receptor-like module  
  0.000000072   2377-2416   LDL receptor-like module  
  0.0000000851   1454-1489   LDL receptor-like module  
  0.000000406   1605-1644   LDL receptor-like module  
  0.000126   1659-1683   LDL receptor-like module  
ENSOCUP00000007024   0.000000812   80-114   LDL receptor-like module  
  0.0000131   163-204   LDL receptor-like module  
  0.000117   128-156   LDL receptor-like module  
ENSOCUP00000007332   0.00000000288   96-134   LDL receptor-like module  
ENSOCUP00000007651   0.00000000353   647-684   LDL receptor-like module  
  0.00000000733   371-410   LDL receptor-like module  
  0.0000000113   336-373   LDL receptor-like module  
  0.0000000114   409-447   LDL receptor-like module  
  0.0000000209   450-482   LDL receptor-like module  
  0.0000000393   721-762   LDL receptor-like module  
  0.0000038   687-719   LDL receptor-like module  
ENSOCUP00000008076   0.000000000733   499-534   LDL receptor-like module  
  0.00000000144   426-462   LDL receptor-like module  
  0.0000000017   462-499   LDL receptor-like module  
  0.00000021   538-578   LDL receptor-like module  
ENSOCUP00000008140   0.0000000000471   455-492   LDL receptor-like module  
  0.000000000157   165-202   LDL receptor-like module  
  0.0000000011   211-250   LDL receptor-like module  
  0.00000236   416-453   LDL receptor-like module  
  0.0034   388-415   LDL receptor-like module  
ENSOCUP00000008541   0.0000000000759   467-505   LDL receptor-like module  
  0.0000000825   544-583   LDL receptor-like module  
  0.000654   503-539   LDL receptor-like module  
ENSOCUP00000008933   0.0000772   125-149   LDL receptor-like module  
ENSOCUP00000009422   0.0000017   184-216   LDL receptor-like module  
ENSOCUP00000009497   0.00000000000877   1265-1306   LDL receptor-like module  
  0.0000000000262   2857-2896   LDL receptor-like module  
  0.0000000000301   27-63   LDL receptor-like module  
  0.0000000000327   1065-1103   LDL receptor-like module  
  0.0000000000707   2735-2776   LDL receptor-like module  
  0.000000000124   3624-3662   LDL receptor-like module  
  0.00000000017   2901-2939   LDL receptor-like module  
  0.000000000183   3921-3958   LDL receptor-like module  
  0.000000000223   217-257   LDL receptor-like module  
  0.000000000288   102-144   LDL receptor-like module  
  0.000000000432   1105-1144   LDL receptor-like module  
  0.000000000524   3506-3541   LDL receptor-like module  
  0.000000000576   3793-3830   LDL receptor-like module  
  0.000000000694   3749-3789   LDL receptor-like module  
  0.00000000072   2983-3023   LDL receptor-like module  
  0.000000000825   3070-3111   LDL receptor-like module  
  0.00000000107   1147-1184   LDL receptor-like module  
  0.00000000118   65-104   LDL receptor-like module  
  0.00000000131   3836-3872   LDL receptor-like module  
  0.00000000157   3714-3751   LDL receptor-like module  
  0.0000000017   3583-3625   LDL receptor-like module  
  0.00000000223   3026-3065   LDL receptor-like module  
  0.00000000249   1022-1060   LDL receptor-like module  
  0.00000000393   2699-2736   LDL receptor-like module  
  0.00000000419   183-220   LDL receptor-like module  
  0.00000000432   3542-3584   LDL receptor-like module  
  0.00000000772   2813-2859   LDL receptor-like module  
  0.00000000785   264-300   LDL receptor-like module  
  0.0000000111   1229-1264   LDL receptor-like module  
  0.0000000864   3878-3916   LDL receptor-like module  
  0.000000144   1185-1223   LDL receptor-like module  
  0.000000157   147-181   LDL receptor-like module  
  0.000000223   2780-2818   LDL receptor-like module  
  0.000000275   2945-2982   LDL receptor-like module  
  0.000000628   1310-1346   LDL receptor-like module  
  0.000000812   3674-3710   LDL receptor-like module  
ENSOCUP00000009783   0.0000000000353   1414-1453   LDL receptor-like module  
  0.0000000000576   1194-1232   LDL receptor-like module  
  0.000000000105   1322-1358   LDL receptor-like module  
  0.000000000209   1151-1192   LDL receptor-like module  
  0.00000000249   1369-1402   LDL receptor-like module  
  0.00000000262   1076-1115   LDL receptor-like module  
  0.00000000445   1237-1270   LDL receptor-like module  
  0.0000000183   1469-1506   LDL receptor-like module  
  0.0000000615   1509-1548   LDL receptor-like module  
  0.000000183   1119-1152   LDL receptor-like module  
  0.00000249   1274-1309   LDL receptor-like module  
ENSOCUP00000010351   0.0000000000458   31-70   LDL receptor-like module  
ENSOCUP00000010382   0.0000000000072   688-726   LDL receptor-like module  
  0.00000183   228-267   LDL receptor-like module  
ENSOCUP00000010939   0.00000000681   100-135   LDL receptor-like module  
ENSOCUP00000011380   0.00000000012   3573-3613   LDL receptor-like module  
  0.000000000127   852-894   LDL receptor-like module  
  0.000000000157   3615-3651   LDL receptor-like module  
  0.00000000017   933-972   LDL receptor-like module  
  0.000000000262   24-63   LDL receptor-like module  
  0.000000000262   3657-3702   LDL receptor-like module  
  0.000000000367   3491-3531   LDL receptor-like module  
  0.000000000393   1017-1054   LDL receptor-like module  
  0.000000000393   2698-2734   LDL receptor-like module  
  0.000000000393   3373-3413   LDL receptor-like module  
  0.000000000419   893-935   LDL receptor-like module  
  0.000000000563   978-1015   LDL receptor-like module  
  0.000000000825   3535-3574   LDL receptor-like module  
  0.00000000144   1061-1101   LDL receptor-like module  
  0.00000000183   2564-2604   LDL receptor-like module  
  0.00000000497   3455-3490   LDL receptor-like module  
  0.00000000524   2819-2855   LDL receptor-like module  
  0.00000000785   2737-2771   LDL receptor-like module  
  0.0000000107   3415-3453   LDL receptor-like module  
  0.0000000128   2604-2643   LDL receptor-like module  
  0.0000000209   3336-3371   LDL receptor-like module  
  0.0000000288   2777-2811   LDL receptor-like module  
  0.0000000497   3744-3780   LDL receptor-like module  
  0.00000017   1147-1182   LDL receptor-like module  
  0.000000183   2528-2565   LDL receptor-like module  
  0.000000196   71-106   LDL receptor-like module  
  0.000000641   2857-2895   LDL receptor-like module  
  0.000000681   1110-1144   LDL receptor-like module  
  0.00000126   2663-2693   LDL receptor-like module  
  0.00000537   3698-3735   LDL receptor-like module  
ENSOCUP00000011740   0.000000000772   1318-1356   LDL receptor-like module  
  0.00000000406   1238-1279   LDL receptor-like module  
  0.00000000406   1280-1316   LDL receptor-like module  
ENSOCUP00000011835   0.0000000144   227-263   LDL receptor-like module  
  0.000000262   192-224   LDL receptor-like module  
ENSOCUP00000013205   0.00000000929   302-340   LDL receptor-like module  
ENSOCUP00000013746   0.00000000249   567-607   LDL receptor-like module  
  0.00000000995   351-392   LDL receptor-like module  
  0.00000196   132-167   LDL receptor-like module  
  0.00000458   785-824   LDL receptor-like module  
ENSOCUP00000014078   0.0000000000275   398-435   LDL receptor-like module  
  0.0000000000759   139-176   LDL receptor-like module  
  0.0000785   328-353   LDL receptor-like module  
  0.00445   356-397   LDL receptor-like module  
ENSOCUP00000014592   0.00000113   53-91   LDL receptor-like module  
ENSOCUP00000014764   0.0000000511   90-130   LDL receptor-like module  
ENSOCUP00000014803   0.0000000000576   763-808   LDL receptor-like module  
  0.000000000223   3643-3683   LDL receptor-like module  
  0.000000000275   3517-3553   LDL receptor-like module  
  0.000000000301   807-846   LDL receptor-like module  
  0.000000000484   728-767   LDL receptor-like module  
  0.000000000484   2776-2817   LDL receptor-like module  
  0.000000000537   3478-3515   LDL receptor-like module  
  0.000000000759   3238-3282   LDL receptor-like module  
  0.000000000798   851-889   LDL receptor-like module  
  0.000000000851   890-928   LDL receptor-like module  
  0.000000000877   2645-2681   LDL receptor-like module  
  0.00000000131   3356-3396   LDL receptor-like module  
  0.00000000209   938-974   LDL receptor-like module  
  0.00000000236   2688-2722   LDL receptor-like module  
  0.00000000262   3559-3602   LDL receptor-like module  
  0.0000000034   3438-3473   LDL receptor-like module  
  0.00000000419   2566-2602   LDL receptor-like module  
  0.00000000537   3201-3236   LDL receptor-like module  
  0.00000000733   2472-2511   LDL receptor-like module  
  0.00000000864   3321-3357   LDL receptor-like module  
  0.00000000982   3399-3436   LDL receptor-like module  
  0.0000000144   3280-3317   LDL receptor-like module  
  0.0000000157   2431-2472   LDL receptor-like module  
  0.0000000236   2724-2765   LDL receptor-like module  
  0.0000000301   2605-2647   LDL receptor-like module  
  0.000000275   2396-2433   LDL receptor-like module  
  0.000000288   2525-2561   LDL receptor-like module  
  0.000000458   1020-1055   LDL receptor-like module  
  0.000000825   980-1017   LDL receptor-like module  
  0.00000694   3606-3637   LDL receptor-like module  
ENSOCUP00000014922   0.0000000157   289-325   LDL receptor-like module  
ENSOCUP00000015868   0.0000000109   248-285   LDL receptor-like module  
  0.000209   411-443   LDL receptor-like module  
ENSOCUP00000015964   0.000000000101   43-80   LDL receptor-like module  
  0.000000000367   295-333   LDL receptor-like module  
  0.000000000445   165-200   LDL receptor-like module  
  0.000000000969   84-127   LDL receptor-like module  
  0.00000000115   204-239   LDL receptor-like module  
  0.00000000196   258-293   LDL receptor-like module  
  0.0000000288   120-162   LDL receptor-like module  
  0.00000017   337-375   LDL receptor-like module  
ENSOCUP00000016158   0.0000000432   26-60   LDL receptor-like module  
ENSOCUP00000017668   0.0000694   73-97   LDL receptor-like module  
ENSOCUP00000018291   0.00000000000484   32-69   LDL receptor-like module  
  0.00000000000838   104-146   LDL receptor-like module  
ENSOCUP00000018355   0.000000327   136-170   LDL receptor-like module  
ENSOCUP00000018458   0.000000000615   322-358   LDL receptor-like module  
  0.000000000641   365-408   LDL receptor-like module  
  0.00000000144   281-317   LDL receptor-like module  
  0.0000000314   194-234   LDL receptor-like module  
ENSOCUP00000022154   0.000000000301   35-72   LDL receptor-like module  
  0.000000000458   75-112   LDL receptor-like module  
  0.00000000124   1-30   LDL receptor-like module  
ENSOCUP00000023495   0.0000000038   307-343   LDL receptor-like module  
ENSOCUP00000025903   0.000000126   123-155   LDL receptor-like module  
ENSOCUP00000026390   0.0000000000484   429-466   LDL receptor-like module  
  0.000000000157   139-176   LDL receptor-like module  
  0.00000000107   185-224   LDL receptor-like module  
  0.00000236   390-427   LDL receptor-like module  
  0.00327   362-389   LDL receptor-like module  
ENSOCUP00000026733   0.0000000458   22-57   LDL receptor-like module  
ENSOCUP00000027169   0.0000000314   287-323   LDL receptor-like module  
 
Weak hits:
ENSOCUP00000004122   0.00324   739-765   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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