Select to display Genome Domains Proteins No ALL 733133 733133 No Homo sapiens 76_38 Human 1483 1480 No Pan troglodytes 76_2.1.4 Chimpanzee 608 606 No Gorilla gorilla 76_3.1 Western gorilla 796 793 No Pongo abelii 76_2 Sumatran orangutan 580 578 No Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 450 449 No Papio anubis 76 Olive baboon 590 587 No Macaca mulatta 76_1 Rhesus monkey 843 838 No Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 903 899 No Otolemur garnettii 76_3 Small-eared galago 1041 1038 No Microcebus murinus 76_1 Gray mouse lemur 515 492 No Rattus norvegicus 76_5.0 Norway rat 1838 1834 No Mus musculus 76_38 House mouse 2080 2077 No Dipodomys ordii 76_1 Ord's kangaroo rat 557 540 No Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1206 1202 No Heterocephalus glaber v1.7-2 Naked mole-rat 1572 1503 No Cavia porcellus 76_3 Domestic guinea pig 1166 1164 No Oryctolagus cuniculus 76_2 Rabbit 1183 1182 No Ochotona princeps 76 American pika 432 412 No Tupaia belangeri 76 Northern tree shrew 664 637 No Sus scrofa 76_10.2 Pig 1499 1494 No Bos taurus 76_3.1 Cattle 1374 1368 No Ovis aries 76_3.1 Sheep 988 956 No Vicugna pacos 76_1 Alpaca 449 420 No Tursiops truncatus 76_1 Bottlenose dolphin 244 235 No Mustela putorius furo 76_1.0 Domestic ferret 998 997 No Ailuropoda melanoleuca 76_1 Giant panda 1110 1107 No Canis familiaris 76_3.1 Dog 923 922 No Felis catus 76_6.2 Domestic cat 1026 1022 No Equus caballus 76_2 Horse 1289 1284 No Myotis lucifugus 76_2.0 Little brown bat 803 796 No Pteropus vampyrus 76_1 Large flying fox 541 526 No Sorex araneus 76_1 European shrew 580 560 No Erinaceus europaeus 76 Western European hedgehog 581 557 No Procavia capensis 76_1 Cape rock hyrax 481 466 No Loxodonta africana 76_3 African savanna elephant 2338 2336 No Echinops telfairi 76 Small Madagascar hedgehog 579 548 No Dasypus novemcinctus 76_2 Nine-banded armadillo 2127 1892 No Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 610 590 No Macropus eugenii 76_1.0 Tammar wallaby 715 690 No Sarcophilus harrisii 76_7.0 Tasmanian devil 1137 1134 Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1406 1389 No Ornithorhynchus anatinus 76_5 Platypus 1337 1332 No Saccoglossus kowalevskii v3.0 581 581 No Petromyzon marinus 76_7.0 Sea lamprey 236 234 No Meleagris gallopavo 76_2 Turkey 343 342 No Gallus gallus 76_4 Chicken 335 334 No Anas platyrhynchos 76_1.0 Mallard 404 401 No Taeniopygia guttata 76_3.2.4 Zebra finch 523 522 No Ficedula albicollis 76_1.0 Collared flycatcher 334 333 No Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 701 694 No Anolis carolinensis 76_2.0 Green anole 434 432 No Xenopus laevis African clawed frog 349 349 No Xenopus tropicalis 76_4.2 Tropical clawed frog 839 836 No Latimeria chalumnae 76_1 Coelacanth 605 590 No Lepisosteus oculatus 76 Spotted gar 678 673 No Gadus morhua 76_1 Atlantic cod 541 524 No Tetraodon nigroviridis 76_8 Spotted green pufferfish 524 522 No Takifugu rubripes 76_4 Torafugu 1538 1524 No Gasterosteus aculeatus 76_1 Three-spined stickleback 680 677 No Oryzias latipes 76_1 Japanese medaka 622 617 No Xiphophorus maculatus 76_4.4.2 Southern platyfish 535 534 No Poecilia formosa 76 Amazon molly 614 590 No Oreochromis niloticus 76_1.0 Nile tilapia 718 714 No Astyanax mexicanus 76 Mexican tetra 616 598 No Danio rerio 76_9 Zebrafish 1082 1079 No Oikopleura dioica 56 56 No Ciona savignyi 76_2.0 Pacific transparent sea squirt 149 146 No Ciona intestinalis 76 Vase tunicate 168 168 No Strongylocentrotus purpuratus v3.1 Purple sea urchin 1193 1165 No Adineta vaga 972 964 No Octopus bimaculoides 280 354 348 No Crassostrea gigas 22 Pacific oyster 475 461 No Lottia gigantea Owl limpet 339 336 No Helobdella robusta 260 252 No Capitella sp. I 1145 1138 No Danaus plexippus OGS1.0 Monarch butterfly 112 110 No Heliconius melpomene Postman butterfly 111 104 No Bombyx mori Domestic silkworm 99 95 No Nasonia vitripennis Jewel wasp 49 48 No Apis mellifera 38.2d (Not maintained) Honey bee 278 272 No Harpegnathos saltator v3.3 Jerdon's jumping ant 78 76 No Linepithema humile v1.1 Argentine ant 99 98 No Pogonomyrmex barbatus v1.2 Red harvester ant 91 89 No Solenopsis invicta v.2.2.3 Red fire ant 89 88 No Acromyrmex echinatior v3.8 Panamanian leafcutter ant 91 91 No Atta cephalotes v1.1 111 109 No Camponotus floridanus v3.3 Florida carpenter ant 87 85 No Lucilia cuprina Australian sheep blowfly 89 83 No Drosophila grimshawi 1.3 100 94 No Drosophila willistoni 1.3 98 90 No Drosophila pseudoobscura 2.13 99 92 No Drosophila persimilis 1.3 85 84 No Drosophila suzukii 116 94 No Drosophila yakuba 1.3 109 103 No Drosophila simulans 1.3 88 86 No Drosophila sechellia 1.3 105 98 No Drosophila melanogaster 76_5 Fruit fly 211 196 No Drosophila erecta 1.3 103 98 No Drosophila ananassae 1.3 95 88 No Drosophila virilis 1.2 94 88 No Drosophila mojavensis 1.3 93 87 No Megaselia scalaris 22 53 50 No Aedes aegypti 55 (Not maintained) Yellow fever mosquito 101 98 No Culex pipiens quinquefasciatus Southern house mosquito 129 121 No Anopheles darlingi 22 American malaria mosquito 73 70 No Anopheles gambiae 49_3j African malaria mosquito 112 110 No Tribolium castaneum 3.0 Red flour beetle 110 109 No Pediculus humanus corporis Human body louse 93 91 No Acyrthosiphon pisum Pea aphid 62 61 No Rhodnius prolixus 22 93 91 No Daphnia pulex Common water flea 206 205 No Strigamia maritima 22 107 106 No Sarcoptes scabiei 76 69 No Tetranychus urticae Two-spotted spider mite 100 98 No Ixodes scapularis Black-legged tick 167 165 No Pristionchus pacificus 443 442 No Meloidogyne incognita Southern root-knot nematode 360 352 No Meloidogyne hapla 152 152 No Onchocerca volvulus 22 177 173 No Brugia malayi WS250 Agent of lymphatic filariasis 113 110 No Caenorhabditis japonica 449 441 No Caenorhabditis brenneri 911 876 No Caenorhabditis remanei 1139 1102 No Caenorhabditis elegans 76_235 Roundworm 1160 1154 No Caenorhabditis briggsae 2 858 830 No Trichinella spiralis 22 91 89 No Hymenolepis microstoma 64 64 No Echinococcus multilocularis 68 67 No Echinococcus granulosus 64 63 No Taenia solium Pork tapeworm 84 84 No Schistosoma mansoni 102 100 No Mnemiopsis leidyi Sea walnut 794 769 No Thelohanellus kitauei 20 20 No Acropora digitifera v1.0 195 194 No Nematostella vectensis 1.0 Starlet sea anemone 1151 1138 No Hydra vulgaris 102 102 No Amphimedon queenslandica 220 216 No Trichoplax adhaerens 424 423 No Proterospongia sp. ATCC 50818 4 4 No Monosiga brevicollis 2 2 No Capsaspora owczarzaki ATCC 30864 11 11 No Conidiobolus coronatus NRRL28638 v1.0 244 244 No Phycomyces blakesleeanus 1 1 No Rhizomucor miehei CAU432 1 1 No Sporisorium reilianum 22 4 4 No Ustilago maydis 4 4 No Mixia osmundae IAM 14324 v1.0 4 4 No Cronartium quercuum f. sp. fusiforme G11 v1.0 6 6 No Puccinia graminis f. sp. tritici CRL 75-36-700-3 3 3 No Melampsora laricis-populina 6 6 No Rhodotorula graminis WP1 v1.0 5 5 No Sporobolomyces roseus IAM 13481 3 3 No Microbotryum violaceum 22 4 4 No Wallemia sebi v1.0 2 2 No Sphaerobolus stellatus v1.0 24 24 No Piloderma croceum F 1598 v1.0 15 15 No Serpula lacrymans var. lacrymans S7.9 4 4 No Coniophora puteana 2 2 No Hydnomerulius pinastri v2.0 2 2 No Paxillus rubicundulus Ve08.2h10 v1.0 2 2 No Pisolithus microcarpus 441 v1.0 2 2 No Pisolithus tinctorius Marx 270 v1.0 9 9 No Scleroderma citrinum Foug A v1.0 6 6 No Coprinopsis cinerea okayama7 130 v3 3 3 No Pleurotus ostreatus Oyster mushroom 11 11 No Amanita thiersii Skay4041 v1.0 1 1 No Amanita muscaria Koide v1.0 Fly agaric 2 2 No Galerina marginata v1.0 9 9 No Hebeloma cylindrosporum h7 v2.0 6 6 No Laccaria bicolor S238N-H82 6 6 No Agaricus bisporus var. bisporus 1 1 No Schizophyllum commune 4 4 No Stereum hirsutum FP-91666 SS1 v1.0 10 10 No Heterobasidion annosum 5 5 No Gloeophyllum trabeum v1.0 5 5 No Punctularia strigosozonata v1.0 9 9 No Sebacina vermifera MAFF 305830 v1.0 6 6 No Fomitiporia mediterranea v1.0 3 3 No Tulasnella calospora AL13/4D v1.0 8 8 No Postia placenta 9 9 No Wolfiporia cocos MD-104 SS10 v1.0 5 5 No Fomitopsis pinicola v1.0 11 11 No Fomitopsis pinicola FP-58527 SS1 v3.0 9 9 No Phanerochaete chrysosporium RP-78 2.1 7 7 No Dichomitus squalens 3 3 No Trametes versicolor v1.0 3 3 No Tremella mesenterica Witches' butter 4 4 No Daldinia eschscholzii EC12 v1.0 7 7 No Apiospora montagnei NRRL 25634 v1.0 11 11 No Magnaporthe poae ATCC 64411 22 7 7 No Magnaporthe grisea 70-15 8 8 No Podospora anserina 9 9 No Sporotrichum thermophile ATCC 42464 9 9 No Thielavia terrestris NRRL 8126 10 10 No Chaetomium globosum CBS 148.51 7 7 No Neurospora tetrasperma 6 6 No Neurospora discreta FGSC 8579 6 6 No Neurospora crassa OR74A 6 6 No Cryphonectria parasitica Chestnut blight fungus 11 11 No Verticillium albo-atrum VaMs.102 6 6 No Verticillium dahliae VdLs.17 9 9 No Acremonium alcalophilum v 1.0 3 3 No Glomerella graminicola 22 12 12 No Fusarium graminearum 10 10 No Nectria haematococca mpVI 15 15 No Fusarium oxysporum f. sp. lycopersici 4286 13 13 No Fusarium verticillioides 7600 11 11 No Trichoderma asperellum CBS 433.97 v1.0 6 6 No Trichoderma atroviride 6 6 No Trichoderma citrinoviride v1.0 5 5 No Trichoderma reesei 1.2 5 5 No Trichoderma virens Gv29-8 5 5 No Trichoderma longibrachiatum ATCC 18648 v1.0 5 5 No Trichoderma harzianum CBS 226.95 v1.0 6 6 No Amorphotheca resinae v1.0 Creosote fungus 7 7 No Botrytis cinerea B05.10 6 6 No Sclerotinia sclerotiorum 6 6 No Blumeria graminis 22 4 4 No Didymella exigua CBS 183.55 v1.0 8 8 No Leptosphaeria maculans 22 7 7 No Setosphaeria turcica v1.0 7 7 No Cochliobolus miyabeanus ATCC 44560 v1.0 7 7 No Cochliobolus victoriae FI3 v1.0 6 6 No Cochliobolus carbonum 26-R-13 v1.0 6 6 No Cochliobolus heterostrophus Southern corn leaf blight pathogen 6 6 No Alternaria brassicicola 5 5 No Cochliobolus lunatus m118 v2.0 7 7 No Pyrenophora teres f. teres 22 6 6 No Pyrenophora tritici-repentis 6 6 No Stagonospora nodorum 6 6 No Mycosphaerella graminicola IPO323 6 6 No Zasmidium cellare ATCC 36951 v1.0 7 7 No Dothistroma septosporum 10 10 No Septoria musiva v1.0 8 8 No Mycosphaerella fijiensis CIRAD86 8 8 No Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 7 7 No Paracoccidioides brasiliensis Pb18 3 3 No Coccidioides posadasii RMSCC 3488 3 3 No Coccidioides immitis RS 3 3 No Ajellomyces dermatitidis SLH14081 3 3 No Histoplasma capsulatum class NAmI strain WU24 3 3 No Microsporum canis CBS 113480 5 5 No Trichophyton equinum CBS 127.97 5 5 No Trichophyton verrucosum HKI 0517 5 5 No Arthroderma benhamiae CBS 112371 5 5 No Trichophyton tonsurans CBS 112818 5 5 No Trichophyton rubrum CBS 118892 5 5 No Uncinocarpus reesii 1704 2 2 No Aspergillus zonatus v1.0 4 4 No Penicillium chrysogenum Wisconsin 54-1255 6 6 No Penicillium chrysogenum v1.0 6 6 No Aspergillus acidus v1.0 5 5 No Aspergillus fumigatus Af293 6 6 No Aspergillus brasiliensis v1.0 6 6 No Aspergillus nidulans FGSC A4 4 4 No Aspergillus sydowii v1.0 7 7 No Aspergillus versicolor v1.0 6 6 No Aspergillus glaucus 7 7 No Aspergillus carbonarius ITEM 5010 5 5 No Neosartorya fischeri NRRL 181 6 6 No Aspergillus terreus NIH2624 5 5 No Aspergillus tubingensis v1.0 5 5 No Aspergillus wentii v1.0 7 7 No Aspergillus oryzae RIB40 3 3 No Aspergillus niger 22 5 5 No Aspergillus niger ATCC 1015 5 5 No Aspergillus flavus NRRL3357 4 4 No Aspergillus clavatus NRRL 1 4 4 No Penicillium marneffei ATCC 18224 7 7 No Tuber melanosporum Mel28 22 3 3 No Tuber melanosporum Vittad Perigord truffle 4 4 No Hansenula polymorpha v2.0 1 1 No Dekkera bruxellensis CBS 2499 v2.0 3 3 No Pichia membranifaciens v1.0 1 1 No Candida tanzawaensis NRRL Y-17324 v1.0 2 2 No Candida dubliniensis CD36 3 3 No Candida tropicalis MYA-3404 3 3 No Candida parapsilosis 3 3 No Candida albicans SC5314 3 3 No Lodderomyces elongisporus NRRL YB-4239 2 2 No Babjeviella inositovora NRRL Y-12698 v1.0 1 1 No Pichia stipitis CBS 6054 2 2 No Candida guilliermondii ATCC 6260 2 2 No Hyphopichia burtonii NRRL Y-1933 v1.0 2 2 No Debaromyces hansenii 4 4 No Wickerhamomyces anomalus 3 3 No Hanseniaspora valbyensis NRRL Y-1626 v1.1 1 1 No Yarrowia lipolytica CLIB122 2 2 No Candida lusitaniae ATCC 42720 1 1 No Metschnikowia bicuspidata NRRL YB-4993 v1.0 1 1 No Vanderwaltozyma polyspora DSM 70294 3 3 No Candida glabrata CBS138 4 4 No Kluyveromyces thermotolerans CBS 6340 1 1 No Lachancea kluyveri 2 2 No Kluyveromyces waltii 1 1 No Zygosaccharomyces rouxii 4 4 No Saccharomyces mikatae MIT 4 4 No Saccharomyces paradoxus MIT 4 4 No Saccharomyces cerevisiae 76 Baker's yeast 4 4 No Saccharomyces bayanus MIT 3 3 No Kluyveromyces lactis 1 1 No Schizosaccharomyces cryophilus OY26 22 1 1 No Schizosaccharomyces octosporus yFS286 1 1 No Schizosaccharomyces japonicus yFS275 1 1 No Schizosaccharomyces pombe Fission yeast 1 1 No Catenaria anguillulae PL171 v1.0 24 24 No Allomyces macrogynus ATCC 38327 21 21 No Spizellomyces punctatus DAOM BR117 24 24 No Dictyostelium discoideum 21 21 No Dictyostelium purpureum 13 13 No Entamoeba dispar 1.2 1 1 No Selaginella moellendorffii 2 2 No Eucalyptus grandis v201 Rose gum 2 2 No Theobroma cacao B97-61/B2 v1 Cacao 1 1 No Gossypium raimondii v221 2 2 No Citrus clementina v165 2 2 No Citrus sinensis v154 Sweet orange 2 2 No Thellungiella halophila v173 1 1 No Brassica rapa Chiifu-401 1.2 Field mustard 1 1 No Capsella rubella v183 1 1 No Arabidopsis lyrata Lyrate rockcress 1 1 No Arabidopsis thaliana 10 Thale cress 1 1 No Carica papaya Papaya 1 1 No Medicago truncatula Barrel medic 1 1 No Phaseolus vulgaris v186 French bean 2 2 No Glycine max v109 Soybean 2 2 No Cucumis sativus v122 Cucumber 1 1 No Fragaria vesca Wild strawberry 1 1 No Malus domestica v196 Apple 2 2 No Prunus persica v139 Peach 1 1 No Linum usitatissimum v200 Flax 2 2 No Manihot esculenta v147 Cassava 1 1 No Populus trichocarpa v156 Black cottonwood 1 1 No Vitis vinifera Wine grape 1 1 No Mimulus guttatus v140 Spotted monkey flower 1 1 No Solanum lycopersicum v.2.3 Tomato 1 1 No Solanum tuberosum Potato 2 2 No Aquilegia coerulea v195 1 1 No Triticum aestivum 22 Bread wheat 3 3 No Aegilops tauschii 22 1 1 No Brachypodium distachyon Stiff brome 1 1 No Oryza barthii 22 African wild rice 1 1 No Oryza glumaepatula 22 1 1 No Oryza glaberrima African rice 2 2 No Oryza punctata 22 1 1 No Oryza nivara 22 2 2 No Oryza brachyantha 22 Malo sina 1 1 No Oryza sativa ssp. japonica 5.0 Japanese rice 1 1 No Oryza sativa v193 Rice 1 1 No Phyllostachys heterocycla var. pubescens Kikko-chiku 1 1 No Panicum virgatum v202 Switchgrass 1 1 No Setaria italica v164 Foxtail millet 1 1 No Zea mays subsp. mays Maize 1 1 No Zea mays v181 Maize 1 1 No Sorghum bicolor Sorghum 2 2 No Musa acuminata 22 Wild Malaysian banana 2 2 No Amborella trichopoda 22 1 1 No Physcomitrella patens 2 2 No Coccomyxa subellipsoidea sp. C-169 v2 1 1 No Asterochloris sp. Cgr/DA1pho v1.0 5 5 No Chlorella variabilis sp. NC64A 1 1 No Chlorella vulgaris 1 1 No Volvox carteri f. nagariensis 7 7 No Volvox carteri v199 7 7 No Chlamydomonas reinhardtii 4.0 6 6 No Ostreococcus sp. RCC809 1 1 No Ostreococcus tauri 1 1 No Bathycoccus prasinos 2 2 No Micromonas sp. RCC299 2 2 No Micromonas pusilla CCMP1545 v3.0 4 3 No Thecamonas trahens ATCC 50062 7 7 No Bigelowiella natans CCMP2755 22 7 7 No Cyanophora paradoxa 12 12 No Trypanosoma cruzi strain CL Brener 1 1 No Ectocarpus siliculosus 2 2 No Aureococcus anophagefferens 3 3 No Albugo laibachii 22 14 14 No Pythium iwayamai DAOM BR242034 22 10 10 No Pythium arrhenomanes ATCC 12531 22 10 10 No Pythium ultimum v1.7-2 11 11 No Pythium aphanidermatum DAOM BR444 22 9 9 No Pythium irregulare DAOM BR486 22 12 12 No Pythium vexans DAOM BR484 22 8 8 No Phytophthora ramorum 1.1 Sudden oak death agent 13 13 No Phytophthora sojae 1.1 12 12 No Phytophthora infestans T30-4 13 13 No Phytophthora capsici 4 4 No Hyaloperonospora arabidopsidis 22 6 6 No Phaeodactylum tricornutum CCAP 1055/1 3 3 No Fragilariopsis cylindrus 16 16 No Thalassiosira pseudonana CCMP1335 3 3 No Perkinsus marinus ATCC 50983 2 2 No Paramecium tetraurelia 16 16 No Tetrahymena thermophila SB210 1 15 15 No Ichthyophthirius multifiliis strain G5 1 1 No Symbiodinium minutum clade B1 v1.2 32 32 No Naegleria gruberi 5 5 No Trichomonas vaginalis 1 1 No Guillardia theta CCMP2712 v1.0 43 43 No Emiliania huxleyi CCMP1516 1 1 No Gloeocapsa sp. PCC 7428 1 1 No Halothece sp. PCC 7418 1 1 No Gloeobacter violaceus PCC 7421 1 1 No Nostoc sp. PCC 7120 1 1 No Rubrobacter xylanophilus DSM 9941 1 1 No Geodermatophilus obscurus DSM 43160 1 1 No Kineococcus radiotolerans SRS30216 1 1 No Saccharopolyspora erythraea NRRL 2338 1 1 No Roseiflexus sp. RS-1 1 1 No Truepera radiovictrix DSM 17093 4 4 No Thermus sp. CCB_US3_UF1 1 1 No Aerococcus urinae ACS-120-V-Col10a 1 1 No Exiguobacterium sp. MH3 1 1 No Exiguobacterium sp. AT1b 1 1 No Exiguobacterium sibiricum 255-15 1 1 No Haliscomenobacter hydrossis DSM 1100 1 1 No Salinibacter ruber M8 4 4 No Marivirga tractuosa DSM 4126 1 1 No Spirosoma linguale DSM 74 2 2 No Runella slithyformis DSM 19594 1 1 No Krokinobacter sp. 4H-3-7-5 2 2 No Polaribacter sp. MED152 1 1 No Phycisphaera mikurensis NBRC 102666 2 2 No Isosphaera pallida ATCC 43644 1 1 No Mesotoga prima MesG1.Ag.4.2 1 1 No Dictyoglomus thermophilum H-6-12 1 1 No Candidatus Saccharimonas aalborgensis 1 1 No Burkholderia phytofirmans PsJN 1 1 No Burkholderia phymatum STM815 1 1 No Burkholderia xenovorans LB400 1 1 No Burkholderia sp. CCGE1002 1 1 No Gallionella capsiferriformans ES-2 1 1 No Candidatus Puniceispirillum marinum IMCC1322 1 1 No alpha proteobacterium HIMB5 1 1 No alpha proteobacterium HIMB59 1 1 No Candidatus Pelagibacter sp. IMCC9063 1 1 No Methylobacterium sp. 4-46 1 1 No Vibrio harveyi ATCC BAA-1116 1 1 No Photobacterium profundum SS9 1 1 No Glaciecola nitratireducens FR1064 1 1 No Spiribacter sp. UAH-SP71 1 1 No Legionella pneumophila str. Corby 1 1 No Pantoea vagans C9-1 1 1 No Pantoea ananatis LMG 20103 1 1 No Thioalkalimicrobium cyclicum ALM1 1 1 No Salinarchaeum sp. Harcht-Bsk1 1 1 No Halopiger xanaduensis SH-6 2 2 No Haloterrigena turkmenica DSM 5511 1 1 No Natrinema sp. J7-2 2 2 No Natrialba magadii ATCC 43099 4 4 No Halorubrum lacusprofundi ATCC 49239 2 2 No Haloquadratum walsbyi DSM 16790 3 3 No Halomicrobium mukohataei DSM 12286 4 4 No Halorhabdus utahensis DSM 12940 2 2 No Natronomonas pharaonis DSM 2160 5 5 No Haloarcula hispanica ATCC 33960 4 4 No Haloarcula marismortui ATCC 43049 6 6 No Halobacterium salinarum R1 4 4 No Halobacterium sp. NRC-1 4 4 No Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1321 1301 No Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 155 143 No Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 124 118 No Ascaris suum Victoria/Ghent Pig roundworm 246 244 No Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1112 1107 No Cryptococcus neoformans var. grubii H99 3 3 No Cryptococcus neoformans B-3501A 4 4 No Cryptococcus neoformans JEC21 2 2 No Paracoccidioides brasiliensis Pb01 4 4 No Paracoccidioides brasiliensis Pb03 3 3 No Coccidioides posadasii str. Silveira 4 4 No Coccidioides immitis RMSCC 3703 4 4 No Coccidioides immitis RMSCC 2394 4 4 No Coccidioides immitis H538.4 2 2 No Ajellomyces dermatitidis ER-3 4 4 No Histoplasma capsulatum H143 3 3 No Histoplasma capsulatum H88 3 3 No Histoplasma capsulatum G186AR 3 3 No Aspergillus fumigatus A1163 6 6 No Candida albicans WO-1 4 4 No Saccharomyces cerevisiae UC5 3 3 No Saccharomyces cerevisiae PW5 3 3 No Saccharomyces cerevisiae FL100 3 3 No Saccharomyces cerevisiae CLIB324 2 2 No Saccharomyces cerevisiae CBS7960 3 3 No Saccharomyces cerevisiae YJM269 4 4 No Saccharomyces cerevisiae T7 4 4 No Saccharomyces cerevisiae FostersB 3 3 No Saccharomyces cerevisiae FostersO 3 3 No Saccharomyces cerevisiae VL3 4 4 No Saccharomyces cerevisiae Vin13 3 3 No Saccharomyces cerevisiae LalvinQA23 3 3 No Saccharomyces cerevisiae AWRI796 3 3 No Saccharomyces cerevisiae Sigma1278b 4 4 No Saccharomyces cerevisiae W303 4 4 No Saccharomyces cerevisiae JAY291 4 4 No Saccharomyces cerevisiae AWRI1631 3 3 No Saccharomyces cerevisiae YPS163 3 3 No Saccharomyces cerevisiae M22 1 1 No Saccharomyces cerevisiae T73 1 1 No Saccharomyces cerevisiae CLIB215 4 4 No Saccharomyces cerevisiae Y10 1 1 No Saccharomyces cerevisiae YJM789 4 4 No Saccharomyces cerevisiae YJM789 4 4 No Saccharomyces cerevisiae RM11-1a 4 4 No Saccharomyces cerevisiae RM11-1a 4 4 No Saccharomyces cerevisiae SGD (SGD) Baker's yeast 4 4 No Schizosaccharomyces pombe 972h- 1 1 No Batrachochytrium dendrobatidis JEL423 5 5 No Batrachochytrium dendrobatidis JAM81 7 6 No Theobroma cacao Matina 1-6 v0.9 Cacao 1 1 No Hordeum vulgare 22 Domesticated barley 5 5 No Chroococcidiopsis thermalis PCC 7203 2 2 No Chamaesiphon minutus PCC 6605 2 2 No Cyanothece sp. PCC 7425 2 2 No Cyanothece sp. PCC 7424 1 1 No Thermus oshimai JL-2 1 1 No Thermus thermophilus JL-18 1 1 No Streptococcus salivarius JIM8777 1 1 No Exiguobacterium antarcticum B7 1 1 No Salinibacter ruber DSM 13855 4 4 No Nonlabens dokdonensis DSW-6 2 2 No Psychroflexus torquis ATCC 700755 1 1 No Burkholderia phenoliruptrix BR3459a 1 1 No Burkholderia sp. CCGE1003 1 1 No Burkholderia sp. CCGE1001 1 1 No Nitrosomonas sp. AL212 1 1 No Octadecabacter antarcticus 307 1 1 No Octadecabacter arcticus 238 1 1 No Candidatus Pelagibacter ubique HTCC1062 1 1 No Glaciecola psychrophila 170 1 1 No Spiribacter salinus M19-40 1 1 No Legionella pneumophila str. Lens 1 1 No Legionella pneumophila subsp. pneumophila LPE509 1 1 No Legionella pneumophila subsp. pneumophila str. Thunder Bay 1 1 No Legionella pneumophila subsp. pneumophila str. Philadelphia 1 1 1 No Legionella pneumophila subsp. pneumophila 1 1 No Legionella pneumophila subsp. pneumophila ATCC 43290 1 1 No Legionella pneumophila 2300/99 Alcoy 1 1 No Pantoea ananatis LMG 5342 1 1 No Pantoea ananatis PA13 1 1 No Pantoea ananatis AJ13355 1 1 No Klebsiella pneumoniae KCTC 2242 1 1 No Pseudomonas poae RE*1-1-14 1 1 No Francisella tularensis subsp. holarctica LVS 1 1 No Halovivax ruber XH-70 1 1 No Natrinema pellirubrum DSM 15624 2 2 No Natronobacterium gregoryi SP2 6 6 No Haloquadratum walsbyi C23 3 3 No Halorhabdus tiamatea SARL4B 2 2 No Natronomonas moolapensis 8.8.11 3 3 No Haloarcula hispanica N601 4 4 No Homo sapiens 75_37 (old version GRC) Human 1500 1497 No Homo sapiens Human 897 896 No Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1720 1716 No Heliconius numata 7 7 No Loa loa v3.3 (Request) Eye worm 113 109 No Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 100 100 No Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 53 51 No Lotus japonicus 1 1 No Malus x domestica (Duplicate) Apple 2 2 No Ricinus communis Castor bean 1 1 No Nicotiana benthamiana 0.4.4 (Early draft) 1 1 No Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1 No Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1 No Vibrio campbellii ATCC BAA-1116 (Duplicate of NC) 1 1 No Homo sapiens 69_37 Human 869 867 No Pan troglodytes 69_2.1.4 Chimpanzee 599 598 No Gorilla gorilla 69_3.1 Western gorilla 713 710 No Pongo abelii 69_2 Sumatran orangutan 576 574 No Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 445 444 No Macaca mulatta 69_1 Rhesus monkey 674 670 No Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 651 648 No Otolemur garnettii 69_3 Small-eared galago 1037 1034 No Microcebus murinus 69_1 Gray mouse lemur 515 492 No Rattus norvegicus 69_3.4 Norway rat 1662 1657 No Mus musculus 69_38 House mouse 1722 1720 No Dipodomys ordii 69_1 Ord's kangaroo rat 557 540 No Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1181 1177 No Cavia porcellus 69_3 Domestic guinea pig 1127 1125 No Oryctolagus cuniculus 69_2 Rabbit 1175 1174 No Ochotona princeps 69 American pika 432 412 No Tupaia belangeri 69 Northern tree shrew 663 636 No Sus scrofa 69_10.2 Pig 1439 1434 No Bos taurus 69_3.1 Cattle 1333 1328 No Vicugna pacos 69_1 Alpaca 449 420 No Tursiops truncatus 69_1 Bottlenose dolphin 243 234 No Mustela putorius furo 69_1.0 Domestic ferret 995 994 No Ailuropoda melanoleuca 69_1 Giant panda 1087 1084 No Canis familiaris 69_3.1 Dog 875 874 No Felis catus 69 Domestic cat 446 424 No Equus caballus 69_2 Horse 1273 1268 No Myotis lucifugus 69_2.0 Little brown bat 790 784 No Pteropus vampyrus 69_1 Large flying fox 540 525 No Sorex araneus 69_1 European shrew 579 559 No Erinaceus europaeus 69 Western European hedgehog 580 556 No Procavia capensis 69_1 Cape rock hyrax 481 466 No Loxodonta africana 69_3 African savanna elephant 2282 2280 No Echinops telfairi 69 Small Madagascar hedgehog 579 548 No Dasypus novemcinctus 69_2 Nine-banded armadillo 652 624 No Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 610 590 No Macropus eugenii 69_1.0 Tammar wallaby 715 690 No Sarcophilus harrisii 69_7.0 Tasmanian devil 1098 1095 No Monodelphis domestica 69_5 Gray short-tailed opossum 1333 1320 No Ornithorhynchus anatinus 69_5 Platypus 1150 1145 No Petromyzon marinus 69_7.0 Sea lamprey 231 229 No Meleagris gallopavo 69_2 Turkey 306 305 No Gallus gallus 69_2 Chicken 564 560 No Taeniopygia guttata 69_3.2.4 Zebra finch 518 517 No Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 670 663 No Anolis carolinensis 69_2.0 Green anole 425 423 No Xenopus tropicalis 69_4.2 Tropical clawed frog 788 785 No Latimeria chalumnae 69_1 Coelacanth 575 560 No Gadus morhua 69_1 Atlantic cod 464 447 No Tetraodon nigroviridis 69_8 Spotted green pufferfish 472 470 No Takifugu rubripes 69_4 Torafugu 494 483 No Gasterosteus aculeatus 69_1 Three-spined stickleback 543 540 No Oryzias latipes 69_1 Japanese medaka 506 501 No Xiphophorus maculatus 69_4.4.2 Southern platyfish 532 531 No Oreochromis niloticus 69_1.0 Nile tilapia 639 636 No Danio rerio 69_9 Zebrafish 802 800 No Ciona savignyi 69_2.0 Pacific transparent sea squirt 93 90 No Ciona intestinalis 69 Vase tunicate 162 162 No Drosophila melanogaster 69_5 Fruit fly 95 88 No Caenorhabditis elegans 69_215 Roundworm 1034 1031 No Saccharomyces cerevisiae 69_4 Baker's yeast 4 4 No Arabidopsis thaliana 10 Thale cress 1 1 No 1_050719N (meta-genome) 4 4 No 1_Upper_euphotic (meta-genome) 5 5 No 2_Base_of_chrolophyll_max (meta-genome) 1 1 No 3_050719R (meta-genome) 6 6 No 4_050719Q (meta-genome) 7 7 No 5_050719P (meta-genome) 8 8 No 6_Upper_euphotic (meta-genome) 4 4 No Air microbial communities Singapore indoor air filters 1 (meta-genome) 1 1 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 4 4 No Atta cephalotes fungus garden (ACEF) (meta-genome) 1 1 No Bath Hot Springs, planktonic community (meta-genome) 2 2 No Combined (meta-genome) 2 2 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 1 1 No Dump top (Dump top) (meta-genome) 5 5 No Endophytic microbiome from Rice (meta-genome) 4 4 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 1 1 No Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 1 1 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 3 3 No Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 2 2 No Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 3 3 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 7 7 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 No NCBI 2017_08 genome 283525 280895 No Protozoadb 2010_08 (Protozoadb) 7 7 No simMC - Simulated Medium Complexity Metagenome (meta-genome) 2 2 No Sludge/US, Phrap Assembly (meta-genome) 1 1 No Soil microbial communities from Minnesota Farm (meta-genome) 1 1 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 27 27 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 11 11 No Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 27 27 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 1 1 No Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 1 1 No STRING v9.0.5 (STRING) 31392 30993 No Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 1 1 No Termite Protist Endosymbiont Community (meta-genome) 1 1 No Uniprot 2018_03 genome 220865 217479 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 1 1 No Global Ocean Sampling Expedition (GOS) 2640 2638 No NCBI viral sequences (Viral) 90 90 No PDB chains (SCOP 1.75 ) (PDB) 43 43 No Protein Data Bank (all PDB sequenc) 703 703 No SCOP2 SCOPe CATH ECOD (all domain sequ) 1271 1271 No TargetDB 525 524 No UniProt 311 311
