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  Home > Genomes > Lepisosteus oculatus 76 > Serine protease inhibitors domains


Serine protease inhibitors superfamily domain assignments
in
Lepisosteus oculatus 76

Assignment details

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Lepisosteus oculatus 76 has 118 significant domains in 30 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSLOCP00000000116   0.00000000733   709-772   ATI-like  
  0.000000353   608-670   BSTI  
  0.00000144   257-315   ATI-like  
ENSLOCP00000000121   0.0000000615   699-760   ATI-like  
  0.000000327   602-664   BSTI  
  0.00000131   260-318   ATI-like  
ENSLOCP00000000339   0.000000000128   368-428   ATI-like  
  0.0000018   1-40   ATI-like  
ENSLOCP00000002068   0.0000000000589   587-647   BSTI  
  0.000000000147   979-1038   ATI-like  
  0.00000000768   1371-1426   ATI-like  
ENSLOCP00000002477   0.0000000376   671-728   BSTI  
  0.000000932   766-835   BSTI  
  0.00000121   312-367   ATI-like  
  0.000121   2269-2330   BSTI  
  0.000196   1298-1352   BSTI  
ENSLOCP00000002978   0.00000000196   585-642   BSTI  
ENSLOCP00000004149   0.000000000103   1256-1314   ATI-like  
  0.0000000018   875-930   ATI-like  
  0.0000000139   492-547   ATI-like  
ENSLOCP00000004356   0.00000000000343   2377-2437   ATI-like  
  0.00000000000736   1183-1244   ATI-like  
  0.00000000018   793-852   BSTI  
  0.000000000311   1572-1631   ATI-like  
  0.00000000111   1987-2040   ATI-like  
  0.00000000654   2767-2827   ATI-like  
ENSLOCP00000004386   0.00000000000638   4714-4774   ATI-like  
  0.0000000000137   3520-3581   ATI-like  
  0.0000000000376   741-800   ATI-like  
  0.0000000000458   2327-2387   BSTI  
  0.000000000067   1129-1189   BSTI  
  0.000000000327   3130-3189   BSTI  
  0.000000000589   3909-3968   ATI-like  
  0.00000000245   4324-4377   ATI-like  
  0.00000000327   1520-1580   ATI-like  
  0.00000000523   2718-2778   ATI-like  
  0.0000000123   5103-5163   ATI-like  
  0.000000196   1938-1997   ATI-like  
ENSLOCP00000004571   0.000000000000899   359-419   ATI-like  
  0.000000719   738-797   ATI-like  
  0.00113   2-32   ATI-like  
ENSLOCP00000006721   0.0000000000736   534-594   ATI-like  
  0.000000000278   1307-1365   ATI-like  
  0.000000000736   922-981   BSTI  
ENSLOCP00000006735   0.0000000000703   394-454   ATI-like  
  0.000000000262   1167-1225   ATI-like  
  0.000000000703   782-841   BSTI  
ENSLOCP00000006936   0.00000000000556   1153-1213   ATI-like  
  0.0000000000124   377-437   ATI-like  
  0.0000000000899   2-58   ATI-like  
  0.000000000703   1548-1608   ATI-like  
ENSLOCP00000008287   0.0000000000376   290-347   BSTI  
  0.00000000137   655-716   ATI-like  
  0.000000801   2274-2328   ATI-like  
  0.00000105   752-816   ATI-like  
  0.000376   1126-1181   ATI-like  
ENSLOCP00000008304   0.000000018   546-605   ATI-like  
ENSLOCP00000008327   0.0000000474   374-435   BSTI  
ENSLOCP00000008354   0.0000000000262   633-692   BSTI  
  0.00000000129   264-321   ATI-like  
  0.0000164   738-795   ATI-like  
ENSLOCP00000008377   0.0000000000196   498-557   BSTI  
  0.00128   613-657   ATI-like  
ENSLOCP00000008396   0.0000000000491   590-651   BSTI  
  0.00000000106   242-299   ATI-like  
  0.00997   700-748   ATI-like  
ENSLOCP00000010570   0.0000000018   5502-5562   BSTI  
  0.00000000441   1916-1974   BSTI  
  0.00000000736   1263-1326   ATI-like  
  0.0000000116   456-518   ATI-like  
  0.000000018   813-874   ATI-like  
  0.0000000376   3672-3726   ATI-like  
  0.000000126   4702-4758   BSTI  
  0.00000196   5306-5358   BSTI  
  0.00000376   3201-3245   BSTI  
  0.00000507   5061-5119   ATI-like  
  0.00000883   3466-3531   BSTI  
  0.0000311   913-967   ATI-like  
  0.0000507   5668-5729   ATI-like  
  0.000067   4324-4382   BSTI  
  0.0000932   4100-4156   BSTI  
  0.000687   3885-3936   BSTI  
ENSLOCP00000010590   0.00000000162   4925-4985   BSTI  
  0.00000000392   1901-1959   BSTI  
  0.0000000067   1252-1315   ATI-like  
  0.0000000103   445-507   ATI-like  
  0.0000000164   802-863   ATI-like  
  0.0000000343   3196-3250   ATI-like  
  0.000000113   4173-4229   BSTI  
  0.00000327   2725-2769   BSTI  
  0.00000458   4475-4533   ATI-like  
  0.00000834   2993-3053   BSTI  
  0.0000278   902-956   ATI-like  
  0.0000507   5091-5152   ATI-like  
  0.0000654   3792-3850   BSTI  
  0.0000834   3568-3624   BSTI  
  0.0000997   4725-4781   ATI-like  
  0.000124   3352-3403   BSTI  
ENSLOCP00000016072   0.00000000000392   909-970   ATI-like  
  0.00000000000441   1295-1355   BSTI  
  0.0000000000213   2059-2119   ATI-like  
  0.000000000229   1653-1716   ATI-like  
  0.00000000916   530-586   ATI-like  
ENSLOCP00000017959   0.00000000000605   56-115   BSTI  
ENSLOCP00000019165   0.000000124   2251-2316   BSTI  
ENSLOCP00000019168   0.000000121   2197-2262   BSTI  
ENSLOCP00000019843   0.0000000366   698-760   ATI-like  
  0.000000314   602-664   BSTI  
  0.00000103   260-318   ATI-like  
ENSLOCP00000019847   0.000000343   605-667   BSTI  
  0.0000018   263-321   ATI-like  
ENSLOCP00000020112   0.00000015   740-797   BSTI  
  0.000000507   839-906   ATI-like  
  0.00000123   2239-2300   BSTI  
  0.00000294   380-439   ATI-like  
  0.0000687   1372-1425   ATI-like  
ENSLOCP00000020113   0.000000146   748-805   BSTI  
  0.000000474   847-914   ATI-like  
  0.00000118   2115-2176   BSTI  
  0.00000278   388-447   ATI-like  
  0.0000507   1377-1431   ATI-like  
ENSLOCP00000021071   0.0000000000128   642-704   BSTI  
  0.0000000343   288-343   BSTI  
  0.000000196   2222-2277   BSTI  
  0.0000262   1132-1185   BSTI  
  0.0000343   760-821   ATI-like  
 
Weak hits:
ENSLOCP00000000067   0.00353   37-68   BSTI  

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View all assignments containing a Serine protease inhibitors domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   52301 52301
No Yes Homo sapiens 76_38 Human 96 29
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 32 7
No Yes Gorilla gorilla 76_3.1 Western gorilla 62 18
No Yes Pongo abelii 76_2 Sumatran orangutan 41 14
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 22 8
No Yes Papio anubis 76 Olive baboon 52 13
No Yes Macaca mulatta 76_1 Rhesus monkey 59 21
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 111 35
No Yes Otolemur garnettii 76_3 Small-eared galago 41 12
No Yes Microcebus murinus 76_1 Gray mouse lemur 19 10
No Yes Rattus norvegicus 76_5.0 Norway rat 61 16
No Yes Mus musculus 76_38 House mouse 172 34
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 22 10
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 75 13
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 37 14
No Yes Cavia porcellus 76_3 Domestic guinea pig 57 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 51 14
No Yes Ochotona princeps 76 American pika 26 12
No Yes Tupaia belangeri 76 Northern tree shrew 16 6
No Yes Sus scrofa 76_10.2 Pig 45 17
No Yes Bos taurus 76_3.1 Cattle 57 16
No Yes Ovis aries 76_3.1 Sheep 35 14
No Yes Vicugna pacos 76_1 Alpaca 6 4
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 35 13
No Yes Mustela putorius furo 76_1.0 Domestic ferret 58 15
No Yes Ailuropoda melanoleuca 76_1 Giant panda 62 16
No Yes Canis familiaris 76_3.1 Dog 72 17
No Yes Felis catus 76_6.2 Domestic cat 61 16
No Yes Equus caballus 76_2 Horse 81 17
No Yes Myotis lucifugus 76_2.0 Little brown bat 35 13
No Yes Pteropus vampyrus 76_1 Large flying fox 33 13
No Yes Sorex araneus 76_1 European shrew 9 4
No Yes Erinaceus europaeus 76 Western European hedgehog 11 5
No Yes Procavia capensis 76_1 Cape rock hyrax 24 10
No Yes Loxodonta africana 76_3 African savanna elephant 50 19
No Yes Echinops telfairi 76 Small Madagascar hedgehog 9 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 54 15
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 8 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 22 10
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 62 20
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 53 14
No Yes Ornithorhynchus anatinus 76_5 Platypus 41 26
No Yes Saccoglossus kowalevskii v3.0   135 62
No Yes Petromyzon marinus 76_7.0 Sea lamprey 65 16
No Yes Meleagris gallopavo 76_2 Turkey 59 22
No Yes Gallus gallus 76_4 Chicken 62 15
No Yes Anas platyrhynchos 76_1.0 Mallard 47 17
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 55 22
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 48 16
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 95 26
No Yes Anolis carolinensis 76_2.0 Green anole 99 23
No Yes Xenopus laevis African clawed frog 50 24
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 172 69
No Yes Latimeria chalumnae 76_1 Coelacanth 84 23
No Yes Lepisosteus oculatus 76 Spotted gar 118 30
No Yes Gadus morhua 76_1 Atlantic cod 64 18
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 47 20
No Yes Takifugu rubripes 76_4 Torafugu 116 42
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 103 38
No Yes Oryzias latipes 76_1 Japanese medaka 68 22
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 53 14
No Yes Poecilia formosa 76 Amazon molly 69 21
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 99 27
No Yes Astyanax mexicanus 76 Mexican tetra 56 15
No Yes Danio rerio 76_9 Zebrafish 117 41
No Yes Oikopleura dioica   53 24
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 65 30
No Yes Ciona intestinalis 76 Vase tunicate 39 19
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 68 29
No Yes Adineta vaga   45 23
No Yes Octopus bimaculoides 280   59 36
No Yes Crassostrea gigas 22 Pacific oyster 25 12
No Yes Lottia gigantea Owl limpet 7 7
No Yes Helobdella robusta   5 3
No Yes Capitella sp. I   39 27
No Yes Danaus plexippus OGS1.0 Monarch butterfly 38 16
No Yes Heliconius melpomene Postman butterfly 27 14
No Yes Bombyx mori Domestic silkworm 48 23
No Yes Nasonia vitripennis Jewel wasp 11 7
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 13 9
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 8 4
No Yes Linepithema humile v1.1 Argentine ant 8 6
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 8 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 4 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 3
No Yes Atta cephalotes v1.1   6 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 2
No Yes Lucilia cuprina Australian sheep blowfly 14 7
No Yes Drosophila grimshawi 1.3   6 3
No Yes Drosophila willistoni 1.3   10 4
No Yes Drosophila pseudoobscura 2.13   17 10
No Yes Drosophila persimilis 1.3   11 6
No Yes Drosophila suzukii   10 6
No Yes Drosophila yakuba 1.3   9 6
No Yes Drosophila simulans 1.3   4 4
No Yes Drosophila sechellia 1.3   8 5
No Yes Drosophila melanogaster 76_5 Fruit fly 15 9
No Yes Drosophila erecta 1.3   8 5
No Yes Drosophila ananassae 1.3   7 4
No Yes Drosophila virilis 1.2   6 3
No Yes Drosophila mojavensis 1.3   7 4
No Yes Megaselia scalaris 22   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 27 23
No Yes Culex pipiens quinquefasciatus Southern house mosquito 26 17
No Yes Anopheles darlingi 22 American malaria mosquito 11 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 31 27
No Yes Tribolium castaneum 3.0 Red flour beetle 9 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 1
No Yes Acyrthosiphon pisum Pea aphid 5 1
No Yes Rhodnius prolixus 22   5 1
No Yes Daphnia pulex Common water flea 5 2
No Yes Strigamia maritima 22   6 2
No Yes Sarcoptes scabiei   43 19
No Yes Tetranychus urticae Two-spotted spider mite 20 11
No Yes Ixodes scapularis (Preliminary) Black-legged tick 52 39
No Yes Pristionchus pacificus   53 29
No Yes Meloidogyne incognita Southern root-knot nematode 10 8
No Yes Meloidogyne hapla   13 10
No Yes Onchocerca volvulus 22   13 8
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 10 5
No Yes Caenorhabditis japonica   26 14
No Yes Caenorhabditis brenneri   64 36
No Yes Caenorhabditis remanei   41 22
No Yes Caenorhabditis elegans 76_235 Roundworm 94 37
No Yes Caenorhabditis briggsae 2   52 28
No Yes Trichinella spiralis 22   12 7
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 32 18
No Yes Acropora digitifera v1.0   4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 4
No Yes Hydra vulgaris   14 7
No Yes Amphimedon queenslandica   17 10
No Yes Trichoplax adhaerens   3 1
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aureococcus anophagefferens   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 162 56
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 9 6
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 32 29
No Yes Ascaris suum Victoria/Ghent Pig roundworm 35 16
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 72 29
No Yes Homo sapiens 75_37 (old version GRC) Human 101 31
No Yes Homo sapiens (NCBI version) Human 79 19
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 87 15
No Yes Heliconius numata (Incomplete)   16 15
No Yes Loa loa v3.3 (Request) Eye worm 8 3
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 10 4
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 6 3
No Yes Homo sapiens 69_37 Human 48 12
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 32 7
No Yes Gorilla gorilla 69_3.1 Western gorilla 45 12
No Yes Pongo abelii 69_2 Sumatran orangutan 41 14
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 22 8
No Yes Macaca mulatta 69_1 Rhesus monkey 43 15
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 44 12
No Yes Otolemur garnettii 69_3 Small-eared galago 41 12
No Yes Microcebus murinus 69_1 Gray mouse lemur 19 10
No Yes Rattus norvegicus 69_3.4 Norway rat 53 12
No Yes Mus musculus 69_38 House mouse 90 16
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 22 10
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 43 10
No Yes Cavia porcellus 69_3 Domestic guinea pig 57 16
No Yes Oryctolagus cuniculus 69_2 Rabbit 43 12
No Yes Ochotona princeps 69 American pika 26 12
No Yes Tupaia belangeri 69 Northern tree shrew 16 6
No Yes Sus scrofa 69_10.2 Pig 31 10
No Yes Bos taurus 69_3.1 Cattle 50 12
No Yes Vicugna pacos 69_1 Alpaca 6 4
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 35 13
No Yes Mustela putorius furo 69_1.0 Domestic ferret 57 14
No Yes Ailuropoda melanoleuca 69_1 Giant panda 61 15
No Yes Canis familiaris 69_3.1 Dog 51 13
No Yes Felis catus 69 Domestic cat 31 14
No Yes Equus caballus 69_2 Horse 51 13
No Yes Myotis lucifugus 69_2.0 Little brown bat 33 11
No Yes Pteropus vampyrus 69_1 Large flying fox 33 13
No Yes Sorex araneus 69_1 European shrew 9 4
No Yes Erinaceus europaeus 69 Western European hedgehog 11 5
No Yes Procavia capensis 69_1 Cape rock hyrax 24 10
No Yes Loxodonta africana 69_3 African savanna elephant 40 15
No Yes Echinops telfairi 69 Small Madagascar hedgehog 9 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 6
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 8 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 22 10
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 51 15
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 52 13
No Yes Ornithorhynchus anatinus 69_5 Platypus 39 24
No Yes Petromyzon marinus 69_7.0 Sea lamprey 49 14
No Yes Meleagris gallopavo 69_2 Turkey 49 17
No Yes Gallus gallus 69_2 Chicken 49 13
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 40 16
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 76 21
No Yes Anolis carolinensis 69_2.0 Green anole 95 21
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 155 57
No Yes Latimeria chalumnae 69_1 Coelacanth 66 18
No Yes Gadus morhua 69_1 Atlantic cod 56 15
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 41 16
No Yes Takifugu rubripes 69_4 Torafugu 47 15
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 75 23
No Yes Oryzias latipes 69_1 Japanese medaka 50 15
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 53 14
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 78 20
No Yes Danio rerio 69_9 Zebrafish 70 21
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 41 19
No Yes Ciona intestinalis 69 Vase tunicate 39 19
No Yes Drosophila melanogaster 69_5 Fruit fly 10 7
No Yes Caenorhabditis elegans 69_215 Roundworm 39 21
No Yes NCBI 2017_08 genome   20744 6687
No Yes STRING v9.0.5 (STRING)   2138 876
No Yes Uniprot 2018_03 genome   16723 7229
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   15 15
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   34 34
No Yes TargetDB (Targets)   38 20
No Yes UniProt viral sequences (Viral)   8 8

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.