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Nuclear receptor ligand-binding domain superfamily domain assignments
in
Caenorhabditis briggsae 2

Assignment details

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Caenorhabditis briggsae 2 has 261 significant domains in 253 proteins.

     

Sequence ID   Evalue   Region   Family  
CBG00089   1.06e-47   96-336   Nuclear receptor ligand-binding domain  
CBG00093   4.2e-36   151-388   Nuclear receptor ligand-binding domain  
CBG00806   3.15e-34   114-351   Nuclear receptor ligand-binding domain  
CBG01180   1.44e-34   71-283   Nuclear receptor ligand-binding domain  
CBG01192   2.62e-20   72-229   Nuclear receptor ligand-binding domain  
CBG01193   4.85e-42   102-338   Nuclear receptor ligand-binding domain  
CBG01198   5.37e-49   133-372   Nuclear receptor ligand-binding domain  
CBG01199   7.73e-42   157-369   Nuclear receptor ligand-binding domain  
CBG01227   3.9e-35   624-846   Nuclear receptor ligand-binding domain  
  3.52e-27   336-548   Nuclear receptor ligand-binding domain  
  0.000000000152   129-224   Nuclear receptor ligand-binding domain  
CBG01229   3.77e-41   150-399   Nuclear receptor ligand-binding domain  
CBG01233   1.48e-35   198-425   Nuclear receptor ligand-binding domain  
CBG01234   1.83e-28   179-374   Nuclear receptor ligand-binding domain  
CBG01235   1.87e-36   160-403   Nuclear receptor ligand-binding domain  
CBG01239   1.56e-37   149-397   Nuclear receptor ligand-binding domain  
CBG01240   3.15e-30   153-377   Nuclear receptor ligand-binding domain  
CBG01241   8.75e-37   440-692   Nuclear receptor ligand-binding domain  
  0.00000000115   183-296   Nuclear receptor ligand-binding domain  
CBG01243   6.09e-41   156-405   Nuclear receptor ligand-binding domain  
CBG01244   7.32e-27   153-397   Nuclear receptor ligand-binding domain  
CBG01245   2.02e-33   234-485   Nuclear receptor ligand-binding domain  
CBG01246   1.22e-43   157-406   Nuclear receptor ligand-binding domain  
CBG01247   6.47e-23   154-350   Nuclear receptor ligand-binding domain  
CBG01248   4.48e-32   156-406   Nuclear receptor ligand-binding domain  
CBG01250   9.96e-40   154-404   Nuclear receptor ligand-binding domain  
CBG01251   2.89e-35   160-404   Nuclear receptor ligand-binding domain  
CBG01254   7.55e-33   73-317   Nuclear receptor ligand-binding domain  
CBG01259   1.44e-33   154-399   Nuclear receptor ligand-binding domain  
CBG01262   2.49e-42   93-295   Nuclear receptor ligand-binding domain  
CBG01263   2.57e-24   101-334   Nuclear receptor ligand-binding domain  
CBG01321   2.02e-36   125-351   Nuclear receptor ligand-binding domain  
CBG01328   1.18e-38   11-232   Nuclear receptor ligand-binding domain  
CBG01338   1.01e-25   100-341   Nuclear receptor ligand-binding domain  
CBG01340   4.98e-29   25-209   Nuclear receptor ligand-binding domain  
CBG01341   2.49e-43   103-342   Nuclear receptor ligand-binding domain  
CBG01352   3.48e-28   191-408   Nuclear receptor ligand-binding domain  
CBG01355   4.98e-33   96-351   Nuclear receptor ligand-binding domain  
CBG01357   0.00000000177   170-287   Nuclear receptor ligand-binding domain  
CBG01359   2.49e-36   188-441   Nuclear receptor ligand-binding domain  
CBG01395   7.32e-35   112-361   Nuclear receptor ligand-binding domain  
CBG01402   8.44e-24   153-364   Nuclear receptor ligand-binding domain  
CBG01439   3.8e-40   183-419   Nuclear receptor ligand-binding domain  
CBG01574   4.06e-30   336-571   Nuclear receptor ligand-binding domain  
CBG01866   1.44e-42   225-435   Nuclear receptor ligand-binding domain  
CBG02077   4.85e-31   209-440   Nuclear receptor ligand-binding domain  
CBG02428   0.0000318   17-97   Nuclear receptor ligand-binding domain  
CBG02664   3.28e-37   246-253,346-575   Nuclear receptor ligand-binding domain  
CBG03378   1.7e-21   113-286   Nuclear receptor ligand-binding domain  
CBG03466   8.91e-40   257-490   Nuclear receptor ligand-binding domain  
CBG03687   1.16e-34   146-378   Nuclear receptor ligand-binding domain  
CBG03688   4.7e-35   118-367   Nuclear receptor ligand-binding domain  
CBG03844   6.03e-49   187-403   Nuclear receptor ligand-binding domain  
CBG03848   9.83e-52   91-341   Nuclear receptor ligand-binding domain  
CBG03860   4.06e-37   244-478   Nuclear receptor ligand-binding domain  
CBG04204   3.93e-49   116-347   Nuclear receptor ligand-binding domain  
CBG04240   1.4e-22   190-427   Nuclear receptor ligand-binding domain  
CBG04512   9.83e-20   361-408,555-755   Nuclear receptor ligand-binding domain  
CBG04783   8e-43   110-346   Nuclear receptor ligand-binding domain  
CBG04789   4.98e-28   113-381   Nuclear receptor ligand-binding domain  
CBG04819   7.87e-49   94-327   Nuclear receptor ligand-binding domain  
CBG04845   1.28e-32   125-343   Nuclear receptor ligand-binding domain  
CBG04847   2.81e-34   77-290   Nuclear receptor ligand-binding domain  
CBG04928   1.42e-18   152-368   Nuclear receptor ligand-binding domain  
CBG04929   0.000000000000211   170-380   Nuclear receptor ligand-binding domain  
CBG04941   0.000000684   113-206   Nuclear receptor ligand-binding domain  
CBG04942   4.33e-39   105-321   Nuclear receptor ligand-binding domain  
CBG04944   3.83e-38   169-403   Nuclear receptor ligand-binding domain  
CBG04950   1.31e-42   90-311   Nuclear receptor ligand-binding domain  
CBG04995   1.28e-27   31-244   Nuclear receptor ligand-binding domain  
CBG05270   1.97e-27   176-409   Nuclear receptor ligand-binding domain  
CBG05363   2.69e-28   157-389   Nuclear receptor ligand-binding domain  
CBG05753   8.25e-29   206-448   Nuclear receptor ligand-binding domain  
CBG05944   7.73e-26   360-575   Nuclear receptor ligand-binding domain  
CBG06024   0.0000000242   92-306   Nuclear receptor ligand-binding domain  
CBG06052   0.0000594   207-380   Nuclear receptor ligand-binding domain  
CBG06187   0.00000000000259   216-432   Nuclear receptor ligand-binding domain  
CBG06307   6.42e-36   125-322   Nuclear receptor ligand-binding domain  
CBG06378   4.3e-25   182-377   Nuclear receptor ligand-binding domain  
CBG06379   8.53e-33   147-375   Nuclear receptor ligand-binding domain  
CBG06385   0.0000000000000611   145-262   Nuclear receptor ligand-binding domain  
CBG06387   0.00000000000000879   220-323   Nuclear receptor ligand-binding domain  
CBG06497   3.28e-40   159-377   Nuclear receptor ligand-binding domain  
CBG06498   0.00000249   3-64   Nuclear receptor ligand-binding domain  
CBG06500   3.41e-33   126-291   Nuclear receptor ligand-binding domain  
CBG06502   5.9e-47   58-289   Nuclear receptor ligand-binding domain  
CBG06503   1.02e-41   86-316   Nuclear receptor ligand-binding domain  
CBG06550   1.88e-24   181-429   Nuclear receptor ligand-binding domain  
CBG06579   7.4e-40   98-121,174-394   Nuclear receptor ligand-binding domain  
CBG06599   5.67e-29   145-368   Nuclear receptor ligand-binding domain  
CBG06601   2.11e-20   187-382   Nuclear receptor ligand-binding domain  
CBG06609   5.81e-30   145-376   Nuclear receptor ligand-binding domain  
CBG06611   8.64e-30   187-432   Nuclear receptor ligand-binding domain  
CBG06614   0.0000000000000177   192-353   Nuclear receptor ligand-binding domain  
CBG06625   0.0000859   181-237   Nuclear receptor ligand-binding domain  
CBG06626   3.5e-22   183-395   Nuclear receptor ligand-binding domain  
CBG06731   1.1e-34   170-354   Nuclear receptor ligand-binding domain  
CBG06732   1.57e-40   134-324   Nuclear receptor ligand-binding domain  
CBG06735   0.0000769   181-237   Nuclear receptor ligand-binding domain  
CBG06740   1.44e-45   221-411   Nuclear receptor ligand-binding domain  
  1.84e-39   602-793   Nuclear receptor ligand-binding domain  
CBG07379   1.44e-31   271-517   Nuclear receptor ligand-binding domain  
CBG07552   2.75e-29   247-464   Nuclear receptor ligand-binding domain  
CBG07680   6.29e-30   180-465   Nuclear receptor ligand-binding domain  
CBG07928   2.1e-17   215-374   Nuclear receptor ligand-binding domain  
CBG08244a   1.97e-33   133-358   Nuclear receptor ligand-binding domain  
CBG08244b   1.84e-33   120-345   Nuclear receptor ligand-binding domain  
CBG08259   3.93e-41   118-352   Nuclear receptor ligand-binding domain  
CBG08606   5.88e-22   143-360   Nuclear receptor ligand-binding domain  
CBG08768   2.87e-20   5-139   Nuclear receptor ligand-binding domain  
CBG09320   4.54e-33   192-427   Nuclear receptor ligand-binding domain  
CBG09380   3.67e-23   427-560   Nuclear receptor ligand-binding domain  
  0.000000000673   197-267   Nuclear receptor ligand-binding domain  
CBG09399   2.1e-20   266-500   Nuclear receptor ligand-binding domain  
CBG09567   1.33e-36   166-411   Nuclear receptor ligand-binding domain  
CBG09761   4.2e-26   393-632   Nuclear receptor ligand-binding domain  
CBG10233   4.46e-30   151-299   Nuclear receptor ligand-binding domain  
CBG10264   4.98e-35   111-350   Nuclear receptor ligand-binding domain  
CBG10329   1.16e-19   173-358   Nuclear receptor ligand-binding domain  
CBG10331   0.000000000000915   56-175   Nuclear receptor ligand-binding domain  
CBG10360   5.77e-37   99-120,171-390   Nuclear receptor ligand-binding domain  
CBG10365   3.41e-45   194-409   Nuclear receptor ligand-binding domain  
CBG10388   0.0000000918   30-76   Nuclear receptor ligand-binding domain  
CBG10390   5.24e-41   162-381   Nuclear receptor ligand-binding domain  
CBG10415   9.53e-32   135-371   Nuclear receptor ligand-binding domain  
CBG10447   9.27e-37   161-385   Nuclear receptor ligand-binding domain  
CBG10448   0.00000000000000346   164-268   Nuclear receptor ligand-binding domain  
CBG10462   0.0000000000529   124-240   Nuclear receptor ligand-binding domain  
CBG10465   2.07e-35   161-383   Nuclear receptor ligand-binding domain  
CBG10466   3.73e-16   173-270   Nuclear receptor ligand-binding domain  
CBG10499   1.04e-17   104-321   Nuclear receptor ligand-binding domain  
CBG10500   3.28e-44   91-327   Nuclear receptor ligand-binding domain  
CBG10507   2.1e-38   85-295   Nuclear receptor ligand-binding domain  
  2.23e-37   402-611   Nuclear receptor ligand-binding domain  
CBG10722   4.1e-37   265-506   Nuclear receptor ligand-binding domain  
  5.28e-23   52-239   Nuclear receptor ligand-binding domain  
CBG10855   2.49e-31   266-480   Nuclear receptor ligand-binding domain  
CBG10857   1.3e-43   295-501   Nuclear receptor ligand-binding domain  
CBG10861   1.57e-24   60-106,164-359   Nuclear receptor ligand-binding domain  
CBG11428   5.64e-21   166-350   Nuclear receptor ligand-binding domain  
CBG11459   1.44e-40   133-366   Nuclear receptor ligand-binding domain  
CBG11680   4.98e-44   72-358   Nuclear receptor ligand-binding domain  
CBG12152   1.06e-33   176-423   Nuclear receptor ligand-binding domain  
CBG13142   4.39e-23   195-432   Nuclear receptor ligand-binding domain  
CBG13574   6.06e-44   107-365   Nuclear receptor ligand-binding domain  
CBG13575   4.46e-42   54-295   Nuclear receptor ligand-binding domain  
CBG13576   2.08e-38   75-366   Nuclear receptor ligand-binding domain  
CBG13579   5.9e-42   232-461   Nuclear receptor ligand-binding domain  
CBG13679   1.7e-21   165-371   Nuclear receptor ligand-binding domain  
CBG13722   5.37e-34   194-426   Nuclear receptor ligand-binding domain  
CBG13807   0.00000222   167-378   Nuclear receptor ligand-binding domain  
CBG13899   6.95e-30   260-501   Nuclear receptor ligand-binding domain  
CBG13935   0.000000000000113   284-441   Nuclear receptor ligand-binding domain  
CBG14155   9.96e-21   202-397   Nuclear receptor ligand-binding domain  
CBG14485   6.42e-44   88-383   Nuclear receptor ligand-binding domain  
CBG14515   4.1e-31   350-566   Nuclear receptor ligand-binding domain  
CBG14996   4.98e-32   205-371   Nuclear receptor ligand-binding domain  
CBG14997   6.55e-34   188-412   Nuclear receptor ligand-binding domain  
CBG15006   1.84e-34   174-396   Nuclear receptor ligand-binding domain  
CBG15506   1.25e-40   92-323   Nuclear receptor ligand-binding domain  
CBG15675   2.23e-32   331-558   Nuclear receptor ligand-binding domain  
CBG15730   3.28e-37   221-460   Nuclear receptor ligand-binding domain  
CBG15881   8.53e-24   185-389   Nuclear receptor ligand-binding domain  
CBG16291   1.84e-32   102-342   Nuclear receptor ligand-binding domain  
CBG16375   1.05e-42   142-371   Nuclear receptor ligand-binding domain  
CBG16587   7.03e-32   77-317   Nuclear receptor ligand-binding domain  
CBG16588   6.03e-44   89-326   Nuclear receptor ligand-binding domain  
CBG16589   1.22e-42   92-325   Nuclear receptor ligand-binding domain  
CBG16594   8.26e-47   154-389   Nuclear receptor ligand-binding domain  
CBG16821   0.000000903   121-271   Nuclear receptor ligand-binding domain  
CBG16911   1.84e-30   88-99,287-528   Nuclear receptor ligand-binding domain  
CBG16982   6.63e-16   175-323,372-426   Nuclear receptor ligand-binding domain  
CBG16983   3.28e-37   87-284   Nuclear receptor ligand-binding domain  
CBG17071   0.000000000000755   4-122   Nuclear receptor ligand-binding domain  
CBG17072   0.00000000000000645   120-327   Nuclear receptor ligand-binding domain  
CBG17073   1.03e-17   83-261   Nuclear receptor ligand-binding domain  
CBG17078   0.000000000000996   69-221   Nuclear receptor ligand-binding domain  
CBG17088   6.31e-22   118-336   Nuclear receptor ligand-binding domain  
CBG17178   3.28e-29   263-504   Nuclear receptor ligand-binding domain  
CBG17366   6.07e-22   215-426   Nuclear receptor ligand-binding domain  
CBG17744   3.67e-41   189-425   Nuclear receptor ligand-binding domain  
CBG17747   6.69e-28   152-378   Nuclear receptor ligand-binding domain  
CBG17898   6.23e-35   144-381   Nuclear receptor ligand-binding domain  
CBG17901   1.18e-18   161-322   Nuclear receptor ligand-binding domain  
CBG17903   1.71e-18   38-166   Nuclear receptor ligand-binding domain  
CBG17906   6.15e-38   163-388   Nuclear receptor ligand-binding domain  
CBG17908   5.53e-38   143-366   Nuclear receptor ligand-binding domain  
CBG18170   1.44e-47   145-381   Nuclear receptor ligand-binding domain  
CBG18172   4.46e-41   61-270   Nuclear receptor ligand-binding domain  
CBG18608   2.03e-16   47-208   Nuclear receptor ligand-binding domain  
CBG18980   2.4e-23   107-147,200-417   Nuclear receptor ligand-binding domain  
CBG19058   3.56e-19   178-364   Nuclear receptor ligand-binding domain  
CBG19059   3.98e-17   16-193   Nuclear receptor ligand-binding domain  
  0.0000000000000155   271-394   Nuclear receptor ligand-binding domain  
CBG19060   1.61e-23   171-352   Nuclear receptor ligand-binding domain  
CBG19061   1.03e-29   106-354   Nuclear receptor ligand-binding domain  
CBG19079   4.41e-33   93-320   Nuclear receptor ligand-binding domain  
CBG19080   4.41e-28   129-355   Nuclear receptor ligand-binding domain  
CBG19141   0.0000000000584   183-277   Nuclear receptor ligand-binding domain  
CBG19142   3.82e-26   179-421   Nuclear receptor ligand-binding domain  
CBG19143   3.42e-36   167-419   Nuclear receptor ligand-binding domain  
CBG19144   1.96e-33   179-421   Nuclear receptor ligand-binding domain  
CBG19169   0.00000000000542   157-263   Nuclear receptor ligand-binding domain  
CBG19242   6.42e-36   211-454   Nuclear receptor ligand-binding domain  
CBG19535   0.000000332   221-363   Nuclear receptor ligand-binding domain  
CBG19536   0.0000000000000856   141-281   Nuclear receptor ligand-binding domain  
CBG19594   3.93e-37   168-411   Nuclear receptor ligand-binding domain  
CBG19604   1.3e-34   183-419   Nuclear receptor ligand-binding domain  
CBG19870   3.28e-34   301-538   Nuclear receptor ligand-binding domain  
CBG20347   1.14e-25   3-217   Nuclear receptor ligand-binding domain  
CBG20699   3.41e-44   126-382   Nuclear receptor ligand-binding domain  
CBG20720   6.55e-33   159-377   Nuclear receptor ligand-binding domain  
CBG20727   5.41e-17   204-344   Nuclear receptor ligand-binding domain  
CBG20729   8.99e-17   173-361   Nuclear receptor ligand-binding domain  
CBG21242   1.44e-35   222-450   Nuclear receptor ligand-binding domain  
CBG21251   5.64e-31   27-245   Nuclear receptor ligand-binding domain  
CBG21467   1.44e-35   73-278   Nuclear receptor ligand-binding domain  
CBG21756   2.36e-37   179-454   Nuclear receptor ligand-binding domain  
CBG21851   1.44e-38   116-351   Nuclear receptor ligand-binding domain  
CBG21929   2.49e-31   237-321,381-590   Nuclear receptor ligand-binding domain  
CBG21997   1.26e-38   142-357   Nuclear receptor ligand-binding domain  
CBG21999   1.26e-38   142-357   Nuclear receptor ligand-binding domain  
CBG22326   1.53e-43   117-346   Nuclear receptor ligand-binding domain  
CBG22587   1.84e-42   232-458   Nuclear receptor ligand-binding domain  
CBG22776   6.29e-36   135-341   Nuclear receptor ligand-binding domain  
CBG22840   3.32e-19   22-259   Nuclear receptor ligand-binding domain  
CBG22857   0.000000000000848   150-270   Nuclear receptor ligand-binding domain  
CBG22870   1.24e-33   159-414   Nuclear receptor ligand-binding domain  
CBG22872   5.81e-32   98-348   Nuclear receptor ligand-binding domain  
CBG22874   1.42e-31   159-404   Nuclear receptor ligand-binding domain  
CBG22875   1.18e-22   208-427   Nuclear receptor ligand-binding domain  
CBG22886   0.0000000000547   127-234   Nuclear receptor ligand-binding domain  
CBG22888   0.00000000167   148-265   Nuclear receptor ligand-binding domain  
CBG22906   2.75e-43   98-323   Nuclear receptor ligand-binding domain  
CBG22907   6.55e-47   260-455   Nuclear receptor ligand-binding domain  
CBG22952   3.02e-38   91-344   Nuclear receptor ligand-binding domain  
CBG23318   8.65e-41   155-381   Nuclear receptor ligand-binding domain  
CBG23319   9.44e-37   170-385   Nuclear receptor ligand-binding domain  
CBG23379   1.21e-36   201-433   Nuclear receptor ligand-binding domain  
CBG23380   3.41e-45   224-448   Nuclear receptor ligand-binding domain  
CBG23381   1.18e-39   198-389   Nuclear receptor ligand-binding domain  
CBG23383   2.36e-41   181-226,253-428   Nuclear receptor ligand-binding domain  
CBG23582   4.38e-42   82-324   Nuclear receptor ligand-binding domain  
CBG23583   1.51e-21   149-418   Nuclear receptor ligand-binding domain  
CBG23697   0.00000000000127   125-226   Nuclear receptor ligand-binding domain  
CBG23699   1.08e-23   183-400   Nuclear receptor ligand-binding domain  
CBG23758   2.36e-41   154-371   Nuclear receptor ligand-binding domain  
CBG23759   0.00000000249   69-145   Nuclear receptor ligand-binding domain  
CBG23760   4.04e-26   182-373   Nuclear receptor ligand-binding domain  
CBG23808   9.48e-31   162-385   Nuclear receptor ligand-binding domain  
CBG24087   9.7e-42   192-424   Nuclear receptor ligand-binding domain  
CBG24390   0.0000000000000176   107-197   Nuclear receptor ligand-binding domain  
CBG24522   1.05e-24   36-265   Nuclear receptor ligand-binding domain  
CBG25021   3.28e-37   87-284   Nuclear receptor ligand-binding domain  
CBG26663   1.67e-21   119-358   Nuclear receptor ligand-binding domain  
CBG26862   4.1e-19   7-170   Nuclear receptor ligand-binding domain  
CBG26996   8.78e-42   123-154,197-379   Nuclear receptor ligand-binding domain  
CBG27160   8.93e-22   112-331   Nuclear receptor ligand-binding domain  
CBG27271   0.0000000000000483   50-219   Nuclear receptor ligand-binding domain  
CBG27350   0.0000000000000578   151-252   Nuclear receptor ligand-binding domain  
CBG27371   0.00000000289   17-82   Nuclear receptor ligand-binding domain  
 
Weak hits:
CBG00835   0.000279   144-204   Nuclear receptor ligand-binding domain  
CBG02426   0.000133   163-243   Nuclear receptor ligand-binding domain  
CBG10530   0.0027   170-213   Nuclear receptor ligand-binding domain  
CBG20542   0.000205   214-345   Nuclear receptor ligand-binding domain  
CBG22881   0.00795   148-202   Nuclear receptor ligand-binding domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   90798 90798
No Yes Homo sapiens 76_38 Human 249 248
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 52 52
No Yes Gorilla gorilla 76_3.1 Western gorilla 72 72
No Yes Pongo abelii 76_2 Sumatran orangutan 51 51
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 57 57
No Yes Papio anubis 76 Olive baboon 52 52
No Yes Macaca mulatta 76_1 Rhesus monkey 103 102
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 137 137
No Yes Otolemur garnettii 76_3 Small-eared galago 51 51
No Yes Microcebus murinus 76_1 Gray mouse lemur 49 43
No Yes Rattus norvegicus 76_5.0 Norway rat 59 59
No Yes Mus musculus 76_38 House mouse 132 132
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 45 43
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 48 48
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 62 59
No Yes Cavia porcellus 76_3 Domestic guinea pig 55 54
No Yes Oryctolagus cuniculus 76_2 Rabbit 49 49
No Yes Ochotona princeps 76 American pika 48 43
No Yes Tupaia belangeri 76 Northern tree shrew 50 42
No Yes Sus scrofa 76_10.2 Pig 62 62
No Yes Bos taurus 76_3.1 Cattle 54 54
No Yes Ovis aries 76_3.1 Sheep 51 51
No Yes Vicugna pacos 76_1 Alpaca 32 30
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 49 48
No Yes Mustela putorius furo 76_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 76_1 Giant panda 55 55
No Yes Canis familiaris 76_3.1 Dog 56 56
No Yes Felis catus 76_6.2 Domestic cat 54 54
No Yes Equus caballus 76_2 Horse 53 53
No Yes Myotis lucifugus 76_2.0 Little brown bat 49 49
No Yes Pteropus vampyrus 76_1 Large flying fox 50 49
No Yes Sorex araneus 76_1 European shrew 36 32
No Yes Erinaceus europaeus 76 Western European hedgehog 51 40
No Yes Procavia capensis 76_1 Cape rock hyrax 44 44
No Yes Loxodonta africana 76_3 African savanna elephant 66 66
No Yes Echinops telfairi 76 Small Madagascar hedgehog 47 44
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 60 60
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 40 37
No Yes Macropus eugenii 76_1.0 Tammar wallaby 52 48
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 60 60
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 48 48
No Yes Ornithorhynchus anatinus 76_5 Platypus 46 46
No Yes Saccoglossus kowalevskii v3.0   77 77
No Yes Petromyzon marinus 76_7.0 Sea lamprey 32 32
No Yes Meleagris gallopavo 76_2 Turkey 49 49
No Yes Gallus gallus 76_4 Chicken 49 49
No Yes Anas platyrhynchos 76_1.0 Mallard 52 52
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 52 52
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 48 48
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 58 58
No Yes Anolis carolinensis 76_2.0 Green anole 52 52
No Yes Xenopus laevis African clawed frog 170 170
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 58 58
No Yes Latimeria chalumnae 76_1 Coelacanth 65 65
No Yes Lepisosteus oculatus 76 Spotted gar 64 64
No Yes Gadus morhua 76_1 Atlantic cod 77 75
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 83 83
No Yes Takifugu rubripes 76_4 Torafugu 246 246
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 89 89
No Yes Oryzias latipes 76_1 Japanese medaka 80 80
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 73 73
No Yes Poecilia formosa 76 Amazon molly 74 73
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 94 94
No Yes Astyanax mexicanus 76 Mexican tetra 75 74
No Yes Danio rerio 76_9 Zebrafish 130 130
No Yes Oikopleura dioica   37 37
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 27 27
No Yes Ciona intestinalis 76 Vase tunicate 23 23
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 42 41
No Yes Adineta vaga   139 138
No Yes Octopus bimaculoides 280   38 38
No Yes Crassostrea gigas 22 Pacific oyster 43 42
No Yes Lottia gigantea Owl limpet 31 31
No Yes Helobdella robusta   35 35
No Yes Capitella sp. I   41 40
No Yes Danaus plexippus OGS1.0 Monarch butterfly 20 20
No Yes Heliconius melpomene Postman butterfly 18 18
No Yes Bombyx mori Domestic silkworm 24 23
No Yes Nasonia vitripennis Jewel wasp 15 15
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 63 63
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 19 19
No Yes Linepithema humile v1.1 Argentine ant 21 21
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 20 20
No Yes Solenopsis invicta v.2.2.3 Red fire ant 20 20
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 20 20
No Yes Atta cephalotes v1.1   20 20
No Yes Camponotus floridanus v3.3 Florida carpenter ant 20 20
No Yes Lucilia cuprina Australian sheep blowfly 18 18
No Yes Drosophila grimshawi 1.3   19 19
No Yes Drosophila willistoni 1.3   18 18
No Yes Drosophila pseudoobscura 2.13   19 19
No Yes Drosophila persimilis 1.3   20 20
No Yes Drosophila suzukii   23 20
No Yes Drosophila yakuba 1.3   18 18
No Yes Drosophila simulans 1.3   16 16
No Yes Drosophila sechellia 1.3   17 17
No Yes Drosophila melanogaster 76_5 Fruit fly 66 66
No Yes Drosophila erecta 1.3   18 18
No Yes Drosophila ananassae 1.3   19 19
No Yes Drosophila virilis 1.2   18 18
No Yes Drosophila mojavensis 1.3   18 18
No Yes Megaselia scalaris 22   11 11
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 22 22
No Yes Culex pipiens quinquefasciatus Southern house mosquito 23 23
No Yes Anopheles darlingi 22 American malaria mosquito 15 15
No Yes Anopheles gambiae 49_3j African malaria mosquito 24 24
No Yes Tribolium castaneum 3.0 Red flour beetle 25 25
No Yes Pediculus humanus corporis (Early assembly) Human body louse 18 18
No Yes Acyrthosiphon pisum Pea aphid 15 15
No Yes Rhodnius prolixus 22   20 20
No Yes Daphnia pulex Common water flea 23 23
No Yes Strigamia maritima 22   24 24
No Yes Sarcoptes scabiei   17 17
No Yes Tetranychus urticae Two-spotted spider mite 46 46
No Yes Ixodes scapularis (Preliminary) Black-legged tick 20 20
No Yes Pristionchus pacificus   185 182
No Yes Meloidogyne incognita Southern root-knot nematode 116 113
No Yes Meloidogyne hapla   52 52
No Yes Onchocerca volvulus 22   27 27
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 60 60
No Yes Caenorhabditis japonica   115 113
No Yes Caenorhabditis brenneri   293 275
No Yes Caenorhabditis remanei   319 312
No Yes Caenorhabditis elegans 76_235 Roundworm 438 438
No Yes Caenorhabditis briggsae 2   261 253
No Yes Trichinella spiralis 22   18 17
No Yes Hymenolepis microstoma   13 12
No Yes Echinococcus multilocularis   16 16
No Yes Echinococcus granulosus   16 16
No Yes Taenia solium Pork tapeworm 14 14
No Yes Schistosoma mansoni   22 21
No Yes Mnemiopsis leidyi Sea walnut 3 3
No Yes Acropora digitifera v1.0   9 9
No Yes Nematostella vectensis 1.0 Starlet sea anemone 20 20
No Yes Hydra vulgaris   8 8
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   5 5
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   2 2
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   2 2
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 96 96
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 48 48
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 28 28
No Yes Ascaris suum Victoria/Ghent Pig roundworm 51 50
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 351 351
No Yes Hordeum vulgare 22 Domesticated barley 3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 263 262
No Yes Homo sapiens (NCBI version) Human 139 139
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 49 49
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 30 30
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 31 31
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 28 28
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Homo sapiens 69_37 Human 54 53
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 46 46
No Yes Gorilla gorilla 69_3.1 Western gorilla 50 50
No Yes Pongo abelii 69_2 Sumatran orangutan 48 48
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 46 46
No Yes Macaca mulatta 69_1 Rhesus monkey 49 48
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 48 48
No Yes Otolemur garnettii 69_3 Small-eared galago 49 49
No Yes Microcebus murinus 69_1 Gray mouse lemur 49 43
No Yes Rattus norvegicus 69_3.4 Norway rat 45 45
No Yes Mus musculus 69_38 House mouse 49 49
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 44 42
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 48 48
No Yes Cavia porcellus 69_3 Domestic guinea pig 50 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 45 45
No Yes Ochotona princeps 69 American pika 48 43
No Yes Tupaia belangeri 69 Northern tree shrew 50 42
No Yes Sus scrofa 69_10.2 Pig 50 50
No Yes Bos taurus 69_3.1 Cattle 48 48
No Yes Vicugna pacos 69_1 Alpaca 31 29
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 48 47
No Yes Mustela putorius furo 69_1.0 Domestic ferret 50 50
No Yes Ailuropoda melanoleuca 69_1 Giant panda 50 50
No Yes Canis familiaris 69_3.1 Dog 47 47
No Yes Felis catus 69 Domestic cat 46 42
No Yes Equus caballus 69_2 Horse 48 48
No Yes Myotis lucifugus 69_2.0 Little brown bat 48 48
No Yes Pteropus vampyrus 69_1 Large flying fox 49 48
No Yes Sorex araneus 69_1 European shrew 36 32
No Yes Erinaceus europaeus 69 Western European hedgehog 51 40
No Yes Procavia capensis 69_1 Cape rock hyrax 43 43
No Yes Loxodonta africana 69_3 African savanna elephant 50 50
No Yes Echinops telfairi 69 Small Madagascar hedgehog 47 44
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 41 37
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 39 36
No Yes Macropus eugenii 69_1.0 Tammar wallaby 51 47
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 49 49
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 46 46
No Yes Ornithorhynchus anatinus 69_5 Platypus 43 43
No Yes Petromyzon marinus 69_7.0 Sea lamprey 30 30
No Yes Meleagris gallopavo 69_2 Turkey 39 39
No Yes Gallus gallus 69_2 Chicken 41 41
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 52 52
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 49 49
No Yes Anolis carolinensis 69_2.0 Green anole 49 49
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 52 52
No Yes Latimeria chalumnae 69_1 Coelacanth 54 54
No Yes Gadus morhua 69_1 Atlantic cod 73 71
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 71 71
No Yes Takifugu rubripes 69_4 Torafugu 74 74
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 69 69
No Yes Oryzias latipes 69_1 Japanese medaka 66 66
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 73 73
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 74 74
No Yes Danio rerio 69_9 Zebrafish 76 76
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 16 16
No Yes Ciona intestinalis 69 Vase tunicate 19 19
No Yes Drosophila melanogaster 69_5 Fruit fly 18 18
No Yes Caenorhabditis elegans 69_215 Roundworm 279 279
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes NCBI 2017_08 genome   36298 36211
No Yes STRING v9.0.5 (STRING)   2974 2924
No Yes Uniprot 2018_03 genome   25823 25490
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   148 148
No Yes Protein Data Bank (all PDB sequenc)   2195 2195
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   4711 4711
No Yes TargetDB (Targets)   240 239
No Yes UniProt viral sequences (Viral)   4 4

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