SUPERFAMILY 1.75 HMM library and genome assignments server

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LDL receptor-like module superfamily domain assignments
in
Adineta vaga

Assignment details

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Adineta vaga has 274 significant domains in 125 proteins.

     

Sequence ID   Evalue   Region   Family  
GSADVT00000560001   0.000000117   69-105   LDL receptor-like module  
GSADVT00000561001   0.00000000367   1781-1822   LDL receptor-like module  
  0.0000000877   2006-2041   LDL receptor-like module  
  0.00000089   81-120   LDL receptor-like module  
  0.0000013   295-329   LDL receptor-like module  
  0.00000471   2437-2477   LDL receptor-like module  
  0.0000126   2209-2242   LDL receptor-like module  
  0.0000236   515-552   LDL receptor-like module  
GSADVT00000562001   0.00000000314   3479-3516   LDL receptor-like module  
  0.00000759   3287-3317   LDL receptor-like module  
GSADVT00001120001   0.0000511   77-116   LDL receptor-like module  
GSADVT00001445001   0.00000000262   1426-1463   LDL receptor-like module  
  0.00000000982   1465-1500   LDL receptor-like module  
  0.00000034   1628-1663   LDL receptor-like module  
  0.000000838   1503-1542   LDL receptor-like module  
  0.000000916   1552-1589   LDL receptor-like module  
  0.0000144   1684-1708   LDL receptor-like module  
  0.0000301   1590-1629   LDL receptor-like module  
GSADVT00002081001   0.000000511   98-144   LDL receptor-like module  
  0.0000576   152-189   LDL receptor-like module  
GSADVT00002294001   0.0000142   219-255   LDL receptor-like module  
  0.0000816   174-215   LDL receptor-like module  
GSADVT00002302001   0.0000034   559-593   LDL receptor-like module  
  0.0000537   216-251   LDL receptor-like module  
GSADVT00002374001   0.00000772   216-254   LDL receptor-like module  
  0.0000419   180-213   LDL receptor-like module  
GSADVT00002457001   0.000072   579-613   LDL receptor-like module  
GSADVT00003399001   0.0000000000681   216-256   LDL receptor-like module  
  0.0000000000707   2875-2914   LDL receptor-like module  
  0.00000000017   3565-3607   LDL receptor-like module  
  0.000000000183   1105-1141   LDL receptor-like module  
  0.000000000288   3090-3128   LDL receptor-like module  
  0.000000000929   1026-1062   LDL receptor-like module  
  0.00000000101   3608-3643   LDL receptor-like module  
  0.0000000017   3052-3091   LDL receptor-like module  
  0.00000000209   2746-2789   LDL receptor-like module  
  0.00000000367   21-60   LDL receptor-like module  
  0.00000000367   3806-3847   LDL receptor-like module  
  0.00000000458   1066-1103   LDL receptor-like module  
  0.00000000484   96-133   LDL receptor-like module  
  0.00000000484   181-218   LDL receptor-like module  
  0.0000000055   3856-3900   LDL receptor-like module  
  0.00000000641   3012-3045   LDL receptor-like module  
  0.00000000995   1268-1305   LDL receptor-like module  
  0.0000000118   2922-2957   LDL receptor-like module  
  0.0000000301   1227-1263   LDL receptor-like module  
  0.0000000314   1186-1223   LDL receptor-like module  
  0.0000000327   3897-3931   LDL receptor-like module  
  0.000000034   3763-3805   LDL receptor-like module  
  0.000000034   2713-2750   LDL receptor-like module  
  0.0000000497   3727-3767   LDL receptor-like module  
  0.0000000511   3642-3683   LDL receptor-like module  
  0.0000000694   3682-3724   LDL receptor-like module  
  0.000000157   1145-1185   LDL receptor-like module  
  0.00000055   2791-2834   LDL receptor-like module  
  0.00000055   259-294   LDL receptor-like module  
  0.000000576   141-177   LDL receptor-like module  
  0.000000589   3526-3563   LDL receptor-like module  
  0.000000707   58-97   LDL receptor-like module  
  0.000000956   2838-2877   LDL receptor-like module  
  0.00000314   2959-3008   LDL receptor-like module  
  0.00000511   3945-3978   LDL receptor-like module  
  0.0000131   1312-1351   LDL receptor-like module  
GSADVT00003822001   0.000000113   114-153   LDL receptor-like module  
GSADVT00004117001   0.000000000183   18-56   LDL receptor-like module  
  0.0000000117   140-182   LDL receptor-like module  
  0.0000000196   98-138   LDL receptor-like module  
  0.000000236   59-97   LDL receptor-like module  
GSADVT00005010001   0.000000223   944-982   LDL receptor-like module  
GSADVT00005181001   0.0000000111   201-232   LDL receptor-like module  
GSADVT00006185001   0.0000409   656-694   LDL receptor-like module  
GSADVT00006638001   0.000017   8-39   LDL receptor-like module  
GSADVT00009777001   0.00000000916   734-769   LDL receptor-like module  
GSADVT00012095001   0.000072   582-616   LDL receptor-like module  
GSADVT00012364001   0.0000000111   201-232   LDL receptor-like module  
GSADVT00012625001   0.00000288   216-248   LDL receptor-like module  
  0.0000157   555-594   LDL receptor-like module  
GSADVT00012865001   0.00000435   223-261   LDL receptor-like module  
GSADVT00013494001   0.00000000798   151-183   LDL receptor-like module  
GSADVT00014841001   0.0000114   147-188   LDL receptor-like module  
GSADVT00015372001   0.0000236   539-573   LDL receptor-like module  
  0.0000262   196-234   LDL receptor-like module  
GSADVT00015413001   0.00000249   217-251   LDL receptor-like module  
  0.000017   549-586   LDL receptor-like module  
GSADVT00015435001   0.00000524   216-248   LDL receptor-like module  
  0.0000209   550-586   LDL receptor-like module  
GSADVT00016576001   0.0000632   217-254   LDL receptor-like module  
GSADVT00016850001   0.000000000209   343-378   LDL receptor-like module  
  0.000000000367   438-485   LDL receptor-like module  
  0.0000000707   389-431   LDL receptor-like module  
GSADVT00018378001   0.0000498   656-692   LDL receptor-like module  
GSADVT00018518001   0.0000211   76-116   LDL receptor-like module  
  0.0000954   38-74   LDL receptor-like module  
GSADVT00020108001   0.000000000262   340-375   LDL receptor-like module  
  0.000000000445   435-482   LDL receptor-like module  
  0.0000000864   386-428   LDL receptor-like module  
GSADVT00020770001   0.00000000102   157-192   LDL receptor-like module  
GSADVT00021145001   0.0000458   344-385   LDL receptor-like module  
GSADVT00021774001   0.0000000017   102-139   LDL receptor-like module  
GSADVT00022158001   0.0000223   561-595   LDL receptor-like module  
  0.0000262   222-260   LDL receptor-like module  
GSADVT00022274001   0.0000000000615   306-341   LDL receptor-like module  
GSADVT00022692001   0.0000105   167-206   LDL receptor-like module  
GSADVT00026304001   0.0000376   484-525   LDL receptor-like module  
GSADVT00026954001   0.00000000102   157-192   LDL receptor-like module  
GSADVT00027001001   0.0000471   239-276   LDL receptor-like module  
GSADVT00027517001   0.00000906   222-258   LDL receptor-like module  
GSADVT00027527001   0.0000227   178-219   LDL receptor-like module  
  0.0000393   222-259   LDL receptor-like module  
  0.0000438   581-616   LDL receptor-like module  
GSADVT00028429001   0.00000000641   3937-3974   LDL receptor-like module  
  0.0000000131   7058-7099   LDL receptor-like module  
  0.000000393   7285-7318   LDL receptor-like module  
  0.000000916   7925-7961   LDL receptor-like module  
  0.00000367   5583-5621   LDL receptor-like module  
  0.00000393   5371-5410   LDL receptor-like module  
  0.000011   3744-3775   LDL receptor-like module  
  0.000017   7714-7754   LDL receptor-like module  
  0.0000838   5805-5842   LDL receptor-like module  
GSADVT00029076001   0.00000000017   171-206   LDL receptor-like module  
GSADVT00029252001   0.000000000327   661-709   LDL receptor-like module  
  0.000000000707   570-605   LDL receptor-like module  
  0.000000563   612-654   LDL receptor-like module  
GSADVT00030591001   0.0000166   3-44   LDL receptor-like module  
  0.0000619   50-99   LDL receptor-like module  
GSADVT00030736001   0.0000000017   102-139   LDL receptor-like module  
GSADVT00031723001   0.0000698   214-250   LDL receptor-like module  
GSADVT00031750001   0.00000000131   450-484   LDL receptor-like module  
  0.00000107   355-397   LDL receptor-like module  
GSADVT00032126001   0.00000000982   227-263   LDL receptor-like module  
GSADVT00032204001   0.0000000117   3-36   LDL receptor-like module  
GSADVT00032917001   0.0000196   76-116   LDL receptor-like module  
  0.000038   38-74   LDL receptor-like module  
GSADVT00033011001   0.00000421   211-250   LDL receptor-like module  
GSADVT00033509001   0.00000000236   147-180   LDL receptor-like module  
  0.0000000034   235-284   LDL receptor-like module  
  0.00000017   186-228   LDL receptor-like module  
GSADVT00035692001   0.0000859   217-254   LDL receptor-like module  
GSADVT00035702001   0.0000327   523-556   LDL receptor-like module  
GSADVT00035703001   0.00000969   523-556   LDL receptor-like module  
GSADVT00035713001   0.00000615   531-572   LDL receptor-like module  
  0.00000916   216-258   LDL receptor-like module  
GSADVT00037231001   0.00000000144   450-484   LDL receptor-like module  
  0.00000105   355-397   LDL receptor-like module  
GSADVT00037349001   0.0000576   162-198   LDL receptor-like module  
GSADVT00037350001   0.000000406   155-192   LDL receptor-like module  
GSADVT00039217001   0.00000615   136-171   LDL receptor-like module  
GSADVT00040090001   0.0000463   596-630   LDL receptor-like module  
GSADVT00040245001   0.0000327   640-672   LDL receptor-like module  
  0.000036   221-259   LDL receptor-like module  
GSADVT00040258001   0.0000471   51-92   LDL receptor-like module  
  0.0000602   439-482   LDL receptor-like module  
GSADVT00040312001   0.000017   253-294   LDL receptor-like module  
GSADVT00040532001   0.0000287   458-489   LDL receptor-like module  
GSADVT00040992001   0.0000314   158-192   LDL receptor-like module  
GSADVT00040993001   0.00000484   155-193   LDL receptor-like module  
GSADVT00041196001   0.00000432   5-39   LDL receptor-like module  
GSADVT00041244001   0.000000733   157-192   LDL receptor-like module  
GSADVT00042155001   0.0000755   473-509   LDL receptor-like module  
  0.0000921   681-716   LDL receptor-like module  
GSADVT00043136001   0.00000407   201-238   LDL receptor-like module  
GSADVT00043709001   0.0000000072   514-549   LDL receptor-like module  
  0.000000707   419-461   LDL receptor-like module  
GSADVT00044901001   0.0000317   201-237   LDL receptor-like module  
GSADVT00044942001   0.0000000236   637-675   LDL receptor-like module  
  0.0000157   457-493   LDL receptor-like module  
GSADVT00045883001   0.00000000249   1420-1457   LDL receptor-like module  
  0.00000000982   1459-1493   LDL receptor-like module  
  0.000000432   1622-1657   LDL receptor-like module  
  0.000000825   1497-1536   LDL receptor-like module  
  0.00000089   1546-1583   LDL receptor-like module  
  0.0000157   1678-1702   LDL receptor-like module  
  0.0000327   1583-1622   LDL receptor-like module  
GSADVT00046076001   0.0000632   125-164   LDL receptor-like module  
  0.0000785   488-535   LDL receptor-like module  
GSADVT00046319001   0.00000421   139-178   LDL receptor-like module  
GSADVT00046604001   0.0000877   159-192   LDL receptor-like module  
GSADVT00046605001   0.00000759   157-193   LDL receptor-like module  
GSADVT00047656001   0.0000000144   202-234   LDL receptor-like module  
GSADVT00048353001   0.00000497   431-466   LDL receptor-like module  
  0.00000589   208-245   LDL receptor-like module  
GSADVT00048356001   0.00000477   169-209   LDL receptor-like module  
GSADVT00048600001   0.0000511   77-116   LDL receptor-like module  
GSADVT00049094001   0.00000707   50-88   LDL receptor-like module  
  0.0000356   365-402   LDL receptor-like module  
  0.0000759   4-43   LDL receptor-like module  
GSADVT00049108001   0.000000537   99-144   LDL receptor-like module  
  0.00000589   156-194   LDL receptor-like module  
GSADVT00049195001   0.00000275   8-42   LDL receptor-like module  
GSADVT00050901001   0.0000327   596-630   LDL receptor-like module  
GSADVT00051396001   0.0000425   215-254   LDL receptor-like module  
  0.0000949   448-482   LDL receptor-like module  
GSADVT00052930001   0.0000703   653-684   LDL receptor-like module  
GSADVT00054942001   0.0000714   216-253   LDL receptor-like module  
GSADVT00054986001   0.0000119   211-246   LDL receptor-like module  
GSADVT00055123001   0.00000877   261-296   LDL receptor-like module  
GSADVT00055165001   0.0000000000733   216-256   LDL receptor-like module  
  0.0000000000759   2968-3007   LDL receptor-like module  
  0.000000000183   1081-1117   LDL receptor-like module  
  0.000000000183   1204-1240   LDL receptor-like module  
  0.000000000183   3705-3747   LDL receptor-like module  
  0.000000000314   3183-3221   LDL receptor-like module  
  0.00000000109   3748-3783   LDL receptor-like module  
  0.00000000122   1002-1038   LDL receptor-like module  
  0.00000000183   3145-3184   LDL receptor-like module  
  0.00000000223   2839-2882   LDL receptor-like module  
  0.0000000038   3946-3987   LDL receptor-like module  
  0.00000000406   21-60   LDL receptor-like module  
  0.00000000419   1042-1079   LDL receptor-like module  
  0.00000000497   1165-1202   LDL receptor-like module  
  0.00000000524   96-133   LDL receptor-like module  
  0.00000000602   3995-4029   LDL receptor-like module  
  0.00000000694   3105-3138   LDL receptor-like module  
  0.00000000707   181-218   LDL receptor-like module  
  0.0000000128   3015-3050   LDL receptor-like module  
  0.0000000196   3782-3823   LDL receptor-like module  
  0.0000000223   1244-1283   LDL receptor-like module  
  0.0000000288   1367-1404   LDL receptor-like module  
  0.000000034   1326-1362   LDL receptor-like module  
  0.0000000367   4037-4071   LDL receptor-like module  
  0.000000038   2806-2843   LDL receptor-like module  
  0.0000000458   1278-1322   LDL receptor-like module  
  0.0000000458   3906-3945   LDL receptor-like module  
  0.0000000537   3867-3907   LDL receptor-like module  
  0.00000013   3822-3864   LDL receptor-like module  
  0.000000471   259-294   LDL receptor-like module  
  0.000000602   2884-2927   LDL receptor-like module  
  0.000000641   3666-3703   LDL receptor-like module  
  0.000000772   58-97   LDL receptor-like module  
  0.00000105   2931-2970   LDL receptor-like module  
  0.00000275   141-178   LDL receptor-like module  
  0.0000034   3052-3101   LDL receptor-like module  
  0.0000055   4085-4118   LDL receptor-like module  
  0.0000183   1409-1449   LDL receptor-like module  
GSADVT00055317001   0.00000144   40-74   LDL receptor-like module  
GSADVT00055329001   0.0000142   219-255   LDL receptor-like module  
  0.0000453   174-215   LDL receptor-like module  
GSADVT00055378001   0.000000471   648-685   LDL receptor-like module  
  0.0000367   160-197   LDL receptor-like module  
  0.0000432   449-479   LDL receptor-like module  
GSADVT00056185001   0.0000769   653-695   LDL receptor-like module  
GSADVT00057063001   0.0000767   238-269   LDL receptor-like module  
GSADVT00057841001   0.00000000072   327-365   LDL receptor-like module  
  0.00000000681   204-240   LDL receptor-like module  
  0.0000772   498-533   LDL receptor-like module  
GSADVT00057846001   0.0000544   175-217   LDL receptor-like module  
GSADVT00058849001   0.000000537   99-144   LDL receptor-like module  
  0.00000589   156-194   LDL receptor-like module  
GSADVT00058976001   0.000000687   215-252   LDL receptor-like module  
GSADVT00059109001   0.0000196   219-257   LDL receptor-like module  
  0.0000471   645-686   LDL receptor-like module  
GSADVT00059407001   0.0000303   582-616   LDL receptor-like module  
GSADVT00060083001   0.0000334   202-237   LDL receptor-like module  
GSADVT00061034001   0.0000157   219-259   LDL receptor-like module  
GSADVT00061283001   0.0000000393   114-152   LDL receptor-like module  
GSADVT00062398001   0.0000257   68-103   LDL receptor-like module  
GSADVT00062959001   0.0000327   459-489   LDL receptor-like module  
GSADVT00063128001   0.00000851   569-600   LDL receptor-like module  
  0.0000101   140-178   LDL receptor-like module  
  0.0000105   96-135   LDL receptor-like module  
GSADVT00063202001   0.0000144   131-166   LDL receptor-like module  
GSADVT00063203001   0.000000772   216-249   LDL receptor-like module  
GSADVT00063245001   0.0000574   146-183   LDL receptor-like module  
GSADVT00063701001   0.00000000419   86-121   LDL receptor-like module  
  0.000072   3-33   LDL receptor-like module  
GSADVT00063766001   0.0000196   173-210   LDL receptor-like module  
  0.0000912   215-250   LDL receptor-like module  
GSADVT00064159001   0.000000131   31-71   LDL receptor-like module  
GSADVT00064525001   0.000000701   215-252   LDL receptor-like module  
GSADVT00064999001   0.0000766   100-136   LDL receptor-like module  
GSADVT00065320001   0.00000183   217-255   LDL receptor-like module  
GSADVT00065434001   0.00000000103   155-191   LDL receptor-like module  
GSADVT00067138001   0.0000000000367   408-448   LDL receptor-like module  
GSADVT00067301001   0.00000000103   155-191   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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