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LDL receptor-like module superfamily domain assignments
in
Oreochromis niloticus 69_1.0

Assignment details

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Oreochromis niloticus 69_1.0 has 337 significant domains in 58 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSONIP00000003485   0.000000000668   512-547   LDL receptor-like module  
  0.00000000111   476-513   LDL receptor-like module  
  0.0000000101   441-477   LDL receptor-like module  
ENSONIP00000003931   0.0000000000249   145-181   LDL receptor-like module  
  0.0000000000877   426-463   LDL receptor-like module  
  0.0000000209   190-230   LDL receptor-like module  
  0.0000000471   387-424   LDL receptor-like module  
  0.0000012   349-386   LDL receptor-like module  
ENSONIP00000003936   0.0000000122   298-334   LDL receptor-like module  
ENSONIP00000005059   0.0000000000183   5-42   LDL receptor-like module  
  0.0000000000903   252-292   LDL receptor-like module  
  0.00000000055   211-254   LDL receptor-like module  
  0.0000000038   87-126   LDL receptor-like module  
  0.0000000127   129-166   LDL receptor-like module  
  0.0000000209   168-206   LDL receptor-like module  
  0.000000124   45-82   LDL receptor-like module  
  0.000000916   300-335   LDL receptor-like module  
ENSONIP00000005130   0.00000000301   442-478   LDL receptor-like module  
  0.0000000055   514-549   LDL receptor-like module  
  0.0000000183   477-514   LDL receptor-like module  
  0.000000367   558-598   LDL receptor-like module  
ENSONIP00000005195   0.000000000126   1327-1364   LDL receptor-like module  
  0.00000000131   1249-1288   LDL receptor-like module  
  0.0000000131   1289-1324   LDL receptor-like module  
ENSONIP00000005441   0.0000000000144   888-931   LDL receptor-like module  
  0.0000000000903   930-971   LDL receptor-like module  
  0.000000000301   2763-2804   LDL receptor-like module  
  0.000000000445   3486-3523   LDL receptor-like module  
  0.000000000628   851-885   LDL receptor-like module  
  0.00000000109   973-1011   LDL receptor-like module  
  0.00000000131   3603-3642   LDL receptor-like module  
  0.00000000196   3361-3405   LDL receptor-like module  
  0.00000000196   2899-2940   LDL receptor-like module  
  0.00000000301   2689-2725   LDL receptor-like module  
  0.00000000393   3444-3480   LDL receptor-like module  
  0.00000000419   1013-1046   LDL receptor-like module  
  0.00000000458   3403-3440   LDL receptor-like module  
  0.00000000471   1060-1097   LDL receptor-like module  
  0.00000000484   3644-3687   LDL receptor-like module  
  0.00000000497   3564-3600   LDL receptor-like module  
  0.00000000563   2811-2845   LDL receptor-like module  
  0.0000000101   3324-3358   LDL receptor-like module  
  0.0000000115   3525-3562   LDL receptor-like module  
  0.0000000144   2848-2888   LDL receptor-like module  
  0.0000000236   2594-2634   LDL receptor-like module  
  0.0000000445   2728-2765   LDL receptor-like module  
  0.0000000511   3684-3719   LDL receptor-like module  
  0.0000000589   2554-2595   LDL receptor-like module  
  0.000000196   1108-1140   LDL receptor-like module  
  0.00000072   2650-2684   LDL receptor-like module  
  0.0000017   2519-2556   LDL receptor-like module  
  0.0000034   1144-1178   LDL receptor-like module  
  0.00000353   3732-3764   LDL receptor-like module  
ENSONIP00000005842   0.00000157   199-232   LDL receptor-like module  
ENSONIP00000006857   0.00000000157   637-675   LDL receptor-like module  
  0.00000000275   362-398   LDL receptor-like module  
  0.00000000393   326-362   LDL receptor-like module  
  0.00000000838   711-748   LDL receptor-like module  
  0.0000000103   436-471   LDL receptor-like module  
  0.0000000183   402-435   LDL receptor-like module  
  0.00000301   679-709   LDL receptor-like module  
ENSONIP00000006901   0.00000000458   45-81   LDL receptor-like module  
ENSONIP00000007011   0.0000000393   255-292   LDL receptor-like module  
ENSONIP00000007574   0.0000000000445   1268-1309   LDL receptor-like module  
  0.000000000157   1318-1356   LDL receptor-like module  
  0.00000000109   350-390   LDL receptor-like module  
  0.00000000327   1054-1089   LDL receptor-like module  
  0.00000000327   565-604   LDL receptor-like module  
  0.0000000128   785-823   LDL receptor-like module  
  0.000000314   120-155   LDL receptor-like module  
  0.0000511   1360-1397   LDL receptor-like module  
ENSONIP00000007620   0.0000916   133-158   LDL receptor-like module  
ENSONIP00000007630   0.000000772   107-144   LDL receptor-like module  
ENSONIP00000009028   0.0000000000707   314-354   LDL receptor-like module  
  0.000000000223   279-316   LDL receptor-like module  
  0.000000000445   193-233   LDL receptor-like module  
  0.000000000471   116-155   LDL receptor-like module  
  0.0000000011   360-396   LDL receptor-like module  
  0.00000000301   153-192   LDL receptor-like module  
  0.00000000497   237-275   LDL receptor-like module  
  0.00000157   76-118   LDL receptor-like module  
ENSONIP00000009390   0.00000000055   1327-1365   LDL receptor-like module  
  0.0000000012   1248-1288   LDL receptor-like module  
  0.00000000851   1289-1324   LDL receptor-like module  
ENSONIP00000010341   0.00000000000196   21-59   LDL receptor-like module  
  0.0000000000236   191-229   LDL receptor-like module  
  0.0000000000524   140-180   LDL receptor-like module  
  0.000000000262   101-142   LDL receptor-like module  
  0.000000000419   228-269   LDL receptor-like module  
  0.00000000055   60-102   LDL receptor-like module  
  0.000000038   273-308   LDL receptor-like module  
ENSONIP00000011074   0.0000000000118   1076-1114   LDL receptor-like module  
  0.0000000000157   1035-1074   LDL receptor-like module  
  0.0000000000275   993-1031   LDL receptor-like module  
  0.0000000000327   76-117   LDL receptor-like module  
  0.0000000000432   1237-1278   LDL receptor-like module  
  0.0000000000445   2738-2777   LDL receptor-like module  
  0.0000000000694   2987-3029   LDL receptor-like module  
  0.0000000000864   2679-2718   LDL receptor-like module  
  0.0000000000903   3627-3666   LDL receptor-like module  
  0.000000000115   2858-2896   LDL receptor-like module  
  0.00000000017   3585-3629   LDL receptor-like module  
  0.000000000275   3070-3110   LDL receptor-like module  
  0.000000000288   190-230   LDL receptor-like module  
  0.000000000353   2902-2940   LDL receptor-like module  
  0.000000000956   155-193   LDL receptor-like module  
  0.00000000117   3027-3069   LDL receptor-like module  
  0.00000000119   2-37   LDL receptor-like module  
  0.00000000144   1118-1155   LDL receptor-like module  
  0.00000000157   3510-3546   LDL receptor-like module  
  0.00000000209   3797-3835   LDL receptor-like module  
  0.00000000353   236-272   LDL receptor-like module  
  0.00000000393   3719-3755   LDL receptor-like module  
  0.00000000432   3840-3876   LDL receptor-like module  
  0.00000000511   1156-1194   LDL receptor-like module  
  0.0000000055   3927-3963   LDL receptor-like module  
  0.00000000746   2814-2860   LDL receptor-like module  
  0.0000000196   3546-3588   LDL receptor-like module  
  0.0000000236   3753-3793   LDL receptor-like module  
  0.0000000236   39-75   LDL receptor-like module  
  0.0000000471   120-154   LDL receptor-like module  
  0.0000000589   1200-1237   LDL receptor-like module  
  0.000000236   2944-2987   LDL receptor-like module  
  0.000000249   1280-1318   LDL receptor-like module  
  0.000000484   3681-3714   LDL receptor-like module  
  0.000000798   3883-3920   LDL receptor-like module  
  0.0000034   2780-2819   LDL receptor-like module  
ENSONIP00000011117   0.0000000000144   131-168   LDL receptor-like module  
  0.0000000000458   166-207   LDL receptor-like module  
  0.00000000072   46-81   LDL receptor-like module  
  0.00000000115   81-118   LDL receptor-like module  
  0.000000038   2-40   LDL receptor-like module  
ENSONIP00000011349   0.0000000144   252-288   LDL receptor-like module  
ENSONIP00000011533   0.00000000275   113-151   LDL receptor-like module  
  0.000000275   353-394   LDL receptor-like module  
ENSONIP00000013233   0.000000000000183   1332-1370   LDL receptor-like module  
  0.0000000000367   1239-1275   LDL receptor-like module  
  0.000000000072   1071-1108   LDL receptor-like module  
  0.000000000183   989-1028   LDL receptor-like module  
  0.000000000825   1111-1150   LDL receptor-like module  
  0.00000000668   1392-1429   LDL receptor-like module  
  0.0000000101   1284-1319   LDL receptor-like module  
  0.0000000393   1030-1069   LDL receptor-like module  
  0.000000798   1154-1187   LDL receptor-like module  
  0.00000118   1193-1225   LDL receptor-like module  
  0.0000982   1435-1470   LDL receptor-like module  
ENSONIP00000014005   0.00000000196   105-140   LDL receptor-like module  
ENSONIP00000014127   0.000000000113   1367-1405   LDL receptor-like module  
  0.000000000537   2354-2393   LDL receptor-like module  
  0.00000000262   2412-2450   LDL receptor-like module  
  0.00000000445   1408-1445   LDL receptor-like module  
  0.0000000101   1484-1524   LDL receptor-like module  
  0.0000000144   2222-2261   LDL receptor-like module  
  0.0000000353   1564-1599   LDL receptor-like module  
  0.000000131   2268-2308   LDL receptor-like module  
  0.000000301   1444-1480   LDL receptor-like module  
  0.0000017   1653-1684   LDL receptor-like module  
  0.00000903   1602-1636   LDL receptor-like module  
ENSONIP00000015326   0.0000000183   320-356   LDL receptor-like module  
ENSONIP00000015345   0.0000000000524   847-889   LDL receptor-like module  
  0.000000000275   3527-3567   LDL receptor-like module  
  0.000000000288   3608-3643   LDL receptor-like module  
  0.000000000314   3565-3605   LDL receptor-like module  
  0.000000000367   888-930   LDL receptor-like module  
  0.000000000511   3364-3404   LDL receptor-like module  
  0.000000000524   2689-2725   LDL receptor-like module  
  0.000000000772   929-968   LDL receptor-like module  
  0.000000000825   2554-2595   LDL receptor-like module  
  0.000000000916   973-1011   LDL receptor-like module  
  0.0000000013   1013-1051   LDL receptor-like module  
  0.00000000157   3650-3694   LDL receptor-like module  
  0.00000000223   3484-3523   LDL receptor-like module  
  0.00000000262   1056-1096   LDL receptor-like module  
  0.00000000275   2728-2762   LDL receptor-like module  
  0.00000000275   2768-2802   LDL receptor-like module  
  0.00000000353   24-63   LDL receptor-like module  
  0.00000000406   2594-2634   LDL receptor-like module  
  0.00000000641   3447-3482   LDL receptor-like module  
  0.0000000131   3326-3362   LDL receptor-like module  
  0.0000000301   2849-2889   LDL receptor-like module  
  0.0000000327   3407-3445   LDL receptor-like module  
  0.0000000903   2812-2846   LDL receptor-like module  
  0.000000109   3734-3772   LDL receptor-like module  
  0.000000236   3695-3728   LDL receptor-like module  
  0.000000471   2519-2556   LDL receptor-like module  
  0.000000576   1142-1180   LDL receptor-like module  
  0.000000589   1105-1139   LDL receptor-like module  
  0.00000668   2653-2684   LDL receptor-like module  
ENSONIP00000015892   0.00000000000393   153-190   LDL receptor-like module  
  0.0000000000223   63-104   LDL receptor-like module  
  0.000000000772   28-65   LDL receptor-like module  
  0.000000131   105-144   LDL receptor-like module  
ENSONIP00000015970   0.00000000419   42-79   LDL receptor-like module  
ENSONIP00000016039   0.00000000000157   232-272   LDL receptor-like module  
  0.00000000000471   29-66   LDL receptor-like module  
  0.00000000000589   146-186   LDL receptor-like module  
  0.000000000055   270-310   LDL receptor-like module  
  0.000000000249   105-147   LDL receptor-like module  
  0.000000000262   186-225   LDL receptor-like module  
  0.000000000942   65-101   LDL receptor-like module  
  0.00000000995   315-351   LDL receptor-like module  
ENSONIP00000016076   0.0000000157   142-175   LDL receptor-like module  
ENSONIP00000016088   0.00000000262   115-155   LDL receptor-like module  
ENSONIP00000016323   0.00000000183   228-265   LDL receptor-like module  
  0.000812   25-48   LDL receptor-like module  
  0.00497   447-475   LDL receptor-like module  
ENSONIP00000017193   0.0000000262   270-305   LDL receptor-like module  
  0.000000471   238-268   LDL receptor-like module  
ENSONIP00000017391   0.00000916   459-491   LDL receptor-like module  
  0.0000301   494-525   LDL receptor-like module  
ENSONIP00000017488   0.0000000000183   29-68   LDL receptor-like module  
ENSONIP00000017799   0.000000000124   341-375   LDL receptor-like module  
  0.0000000131   420-452   LDL receptor-like module  
  0.000000182   455-494   LDL receptor-like module  
ENSONIP00000017806   0.00000000117   472-509   LDL receptor-like module  
  0.00000107   507-543   LDL receptor-like module  
  0.00000144   547-586   LDL receptor-like module  
ENSONIP00000018033   0.0000000838   290-326   LDL receptor-like module  
ENSONIP00000018340   0.000000000223   65-103   LDL receptor-like module  
  0.00000000127   107-144   LDL receptor-like module  
  0.00000000157   25-61   LDL receptor-like module  
ENSONIP00000018437   0.00000000089   254-292   LDL receptor-like module  
  0.000000000929   209-246   LDL receptor-like module  
  0.00000000393   331-367   LDL receptor-like module  
  0.00000000654   292-325   LDL receptor-like module  
  0.0000000144   68-100   LDL receptor-like module  
  0.0000000223   32-67   LDL receptor-like module  
  0.0000000406   1-32   LDL receptor-like module  
ENSONIP00000018445   0.00000000654   472-508   LDL receptor-like module  
  0.00000000668   434-473   LDL receptor-like module  
  0.00000000798   510-543   LDL receptor-like module  
ENSONIP00000018753   0.0000000223   257-293   LDL receptor-like module  
ENSONIP00000019080   0.00000379   81-122   LDL receptor-like module  
ENSONIP00000019303   0.0000000000353   437-475   LDL receptor-like module  
  0.000000000838   156-192   LDL receptor-like module  
  0.000000236   199-241   LDL receptor-like module  
  0.000000641   399-436   LDL receptor-like module  
  0.00000113   361-397   LDL receptor-like module  
ENSONIP00000020025   0.0000000903   87-126   LDL receptor-like module  
ENSONIP00000020034   0.000000000406   68-106   LDL receptor-like module  
  0.00000000101   268-307   LDL receptor-like module  
  0.00000000115   149-185   LDL receptor-like module  
  0.00000000196   190-225   LDL receptor-like module  
  0.00000000249   306-343   LDL receptor-like module  
  0.000000262   28-65   LDL receptor-like module  
  0.00000102   232-265   LDL receptor-like module  
  0.00000445   112-145   LDL receptor-like module  
ENSONIP00000020725   0.000000000000196   1242-1288   LDL receptor-like module  
  0.00000000000445   1076-1114   LDL receptor-like module  
  0.0000000000157   1036-1074   LDL receptor-like module  
  0.0000000000183   2956-2999   LDL receptor-like module  
  0.0000000000183   3558-3600   LDL receptor-like module  
  0.000000000038   151-191   LDL receptor-like module  
  0.0000000000511   74-115   LDL receptor-like module  
  0.0000000000511   2705-2747   LDL receptor-like module  
  0.0000000000851   2874-2910   LDL receptor-like module  
  0.0000000000916   190-230   LDL receptor-like module  
  0.0000000000916   3599-3642   LDL receptor-like module  
  0.000000000109   1-37   LDL receptor-like module  
  0.000000000113   1117-1155   LDL receptor-like module  
  0.000000000144   2997-3039   LDL receptor-like module  
  0.000000000497   3725-3765   LDL receptor-like module  
  0.000000000511   3769-3806   LDL receptor-like module  
  0.000000000589   2828-2867   LDL receptor-like module  
  0.000000000628   2670-2707   LDL receptor-like module  
  0.000000000798   3812-3847   LDL receptor-like module  
  0.00000000144   3690-3726   LDL receptor-like module  
  0.00000000367   3040-3080   LDL receptor-like module  
  0.0000000117   3520-3560   LDL receptor-like module  
  0.0000000196   38-74   LDL receptor-like module  
  0.0000000288   3898-3935   LDL receptor-like module  
  0.0000000327   1158-1196   LDL receptor-like module  
  0.0000000576   1201-1237   LDL receptor-like module  
  0.00000017   3854-3892   LDL receptor-like module  
  0.000000209   2749-2789   LDL receptor-like module  
  0.000000288   1280-1318   LDL receptor-like module  
  0.000000288   2784-2830   LDL receptor-like module  
  0.000000458   992-1031   LDL receptor-like module  
  0.000000589   2915-2957   LDL receptor-like module  
  0.000000641   120-153   LDL receptor-like module  
  0.000000785   3653-3686   LDL receptor-like module  
ENSONIP00000020934   0.00000000034   221-257   LDL receptor-like module  
  0.000000000406   117-156   LDL receptor-like module  
  0.0000000012   181-217   LDL receptor-like module  
  0.0000000117   265-305   LDL receptor-like module  
ENSONIP00000020995   0.00000000000236   351-389   LDL receptor-like module  
  0.00000000314   191-228   LDL receptor-like module  
ENSONIP00000021974   0.0000000038   17-53   LDL receptor-like module  
ENSONIP00000022432   0.00000000000916   665-704   LDL receptor-like module  
  0.000000017   205-246   LDL receptor-like module  
ENSONIP00000022615   0.0000000000236   328-366   LDL receptor-like module  
  0.00000209   89-130   LDL receptor-like module  
  0.0000615   281-327   LDL receptor-like module  
  0.00055   241-279   LDL receptor-like module  
ENSONIP00000022752   0.00000000000942   80-119   LDL receptor-like module  
  0.000000000118   118-158   LDL receptor-like module  
  0.000000000196   169-206   LDL receptor-like module  
  0.000000000733   204-244   LDL receptor-like module  
  0.000000113   1-39   LDL receptor-like module  
ENSONIP00000023440   0.0000000000353   239-276   LDL receptor-like module  
  0.0000000000733   60-101   LDL receptor-like module  
  0.0000000000916   149-184   LDL receptor-like module  
  0.000000000196   26-62   LDL receptor-like module  
  0.000000000406   275-315   LDL receptor-like module  
  0.00000000367   187-224   LDL receptor-like module  
  0.0000000157   320-357   LDL receptor-like module  
  0.0000000157   105-143   LDL receptor-like module  
ENSONIP00000023479   0.00000038   120-159   LDL receptor-like module  
ENSONIP00000023480   0.000000785   101-142   LDL receptor-like module  
ENSONIP00000023717   0.0000000209   309-347   LDL receptor-like module  
ENSONIP00000024119   0.000000000196   847-885   LDL receptor-like module  
  0.000000000236   888-930   LDL receptor-like module  
  0.000000000275   3365-3405   LDL receptor-like module  
  0.000000000288   3628-3663   LDL receptor-like module  
  0.000000000419   3586-3625   LDL receptor-like module  
  0.000000000458   3670-3714   LDL receptor-like module  
  0.000000000471   973-1010   LDL receptor-like module  
  0.000000000903   2690-2726   LDL receptor-like module  
  0.000000000903   2769-2803   LDL receptor-like module  
  0.000000000956   1013-1051   LDL receptor-like module  
  0.000000000969   2811-2847   LDL receptor-like module  
  0.00000000106   928-967   LDL receptor-like module  
  0.00000000107   27-66   LDL receptor-like module  
  0.00000000111   3484-3523   LDL receptor-like module  
  0.00000000113   1056-1096   LDL receptor-like module  
  0.00000000157   3550-3587   LDL receptor-like module  
  0.00000000249   2595-2636   LDL receptor-like module  
  0.00000000353   2729-2763   LDL receptor-like module  
  0.00000000393   3444-3481   LDL receptor-like module  
  0.000000012   2900-2941   LDL receptor-like module  
  0.000000017   2848-2888   LDL receptor-like module  
  0.000000017   3328-3361   LDL receptor-like module  
  0.0000000196   3407-3445   LDL receptor-like module  
  0.0000000223   3715-3748   LDL receptor-like module  
  0.000000131   2555-2596   LDL receptor-like module  
  0.000000209   1142-1180   LDL receptor-like module  
  0.000000301   3756-3794   LDL receptor-like module  
  0.000000445   2519-2557   LDL receptor-like module  
  0.00000117   1105-1139   LDL receptor-like module  
  0.00000314   2654-2684   LDL receptor-like module  
 
Weak hits:
ENSONIP00000001929   0.000275   39-69   LDL receptor-like module  
  0.000813   71-110   LDL receptor-like module  
ENSONIP00000025316   0.000409   228-260   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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