SUPERFAMILY 1.75 HMM library and genome assignments server

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TRAF domain-like superfamily domain assignments
in
Amphimedon queenslandica

Assignment details

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Amphimedon queenslandica has 442 significant domains in 246 proteins.

     

Sequence ID   Evalue   Region   Family  
Aqu1.200149|PACid:15698677   0.0000000015   99-157   SIAH, seven in absentia homolog  
Aqu1.200358|PACid:15698886   5.72e-25   216-340   MATH domain  
  7.85e-16   53-114   SIAH, seven in absentia homolog  
  0.0000105   113-192   MATH domain  
Aqu1.200468|PACid:15698996   0.000000000101   13-69   SIAH, seven in absentia homolog  
Aqu1.200515|PACid:15699043   0.00000000000278   105-171   MATH domain  
Aqu1.200679|PACid:15699207   0.00000000608   76-178   SIAH, seven in absentia homolog  
  0.0000307   174-227   SIAH, seven in absentia homolog  
Aqu1.200700|PACid:15699228   0.000015   74-132   SIAH, seven in absentia homolog  
Aqu1.200817|PACid:15699345   0.0000051   124-173   SIAH, seven in absentia homolog  
  0.0000111   93-127   SIAH, seven in absentia homolog  
Aqu1.200818|PACid:15699346   1.8e-27   39-184   MATH domain  
Aqu1.201046|PACid:15699574   2.94e-31   37-188   MATH domain  
Aqu1.201207|PACid:15699735   0.0000000118   74-131   SIAH, seven in absentia homolog  
Aqu1.201224|PACid:15699752   0.000015   105-180   SIAH, seven in absentia homolog  
Aqu1.201450|PACid:15699978   0.000000000000474   5-51   MATH domain  
Aqu1.201537|PACid:15700065   5.72e-20   15-168   MATH domain  
Aqu1.201625|PACid:15700153   0.000000118   76-135   SIAH, seven in absentia homolog  
  0.000719   155-211   SIAH, seven in absentia homolog  
Aqu1.201739|PACid:15700267   5.72e-32   132-281   MATH domain  
  0.000000000582   46-101   SIAH, seven in absentia homolog  
Aqu1.201894|PACid:15700422   0.0000353   81-121   SIAH, seven in absentia homolog  
Aqu1.202198|PACid:15700726   0.0000000000373   80-158   SIAH, seven in absentia homolog  
  0.00105   179-226   SIAH, seven in absentia homolog  
Aqu1.202379|PACid:15700907   0.0000719   12-85   SIAH, seven in absentia homolog  
Aqu1.202427|PACid:15700955   0.0000000981   91-161   SIAH, seven in absentia homolog  
Aqu1.202575|PACid:15701103   0.0000000019   155-223   SIAH, seven in absentia homolog  
  0.000000229   1-48   SIAH, seven in absentia homolog  
Aqu1.202809|PACid:15701337   0.000000137   94-170   SIAH, seven in absentia homolog  
  0.0000105   160-212   SIAH, seven in absentia homolog  
  0.0621   214-239   SIAH, seven in absentia homolog  
Aqu1.202880|PACid:15701408   0.0000229   12-86   SIAH, seven in absentia homolog  
  0.000719   104-158   SIAH, seven in absentia homolog  
Aqu1.202942|PACid:15701470   0.000000000785   81-156   SIAH, seven in absentia homolog  
Aqu1.203228|PACid:15701756   1.08e-22   63-199   MATH domain  
Aqu1.203330|PACid:15701858   1.06e-30   259-399   MATH domain  
  4.77e-16   87-158   SIAH, seven in absentia homolog  
  0.0000000000536   174-232   SIAH, seven in absentia homolog  
Aqu1.203342|PACid:15701870   0.000000000275   81-150   SIAH, seven in absentia homolog  
Aqu1.203449|PACid:15701977   0.000000000654   52-110   SIAH, seven in absentia homolog  
Aqu1.203618|PACid:15702146   0.000000000111   64-141   SIAH, seven in absentia homolog  
Aqu1.203619|PACid:15702147   1.64e-21   358-480   MATH domain  
  0.0000157   170-225   SIAH, seven in absentia homolog  
  0.000118   79-151   SIAH, seven in absentia homolog  
Aqu1.203892|PACid:15702420   0.0000000000687   14-74   SIAH, seven in absentia homolog  
  0.0000981   74-133   SIAH, seven in absentia homolog  
Aqu1.203893|PACid:15702421   0.00000000981   165-209   MATH domain  
Aqu1.204123|PACid:15702651   0.000000183   51-118   SIAH, seven in absentia homolog  
  0.00000262   136-196   SIAH, seven in absentia homolog  
Aqu1.204124|PACid:15702652   0.0000000000000085   11-65   MATH domain  
Aqu1.204724|PACid:15703252   0.00000000000736   428-483   MATH domain  
  0.000203   102-156   SIAH, seven in absentia homolog  
Aqu1.204782|PACid:15703310   0.0000000281   13-92   SIAH, seven in absentia homolog  
  0.0347   106-163   SIAH, seven in absentia homolog  
Aqu1.204847|PACid:15703375   0.000000425   85-152   SIAH, seven in absentia homolog  
  0.000000458   246-329   MATH domain  
  0.000196   173-230   SIAH, seven in absentia homolog  
Aqu1.204918|PACid:15703446   9.16e-44   195-340   MATH domain  
  0.00000229   16-55   SIAH, seven in absentia homolog  
  0.000216   51-101   SIAH, seven in absentia homolog  
Aqu1.205001|PACid:15703529   0.00000000000785   105-169   SIAH, seven in absentia homolog  
Aqu1.205040|PACid:15703568   0.00000000000451   88-164   SIAH, seven in absentia homolog  
  0.000464   173-242   SIAH, seven in absentia homolog  
Aqu1.205100|PACid:15703628   0.000000000000016   289-358   MATH domain  
  0.000000177   121-185   SIAH, seven in absentia homolog  
  0.0177   206-259   SIAH, seven in absentia homolog  
Aqu1.205332|PACid:15703860   0.0000000915   81-162   SIAH, seven in absentia homolog  
  0.0000216   175-232   SIAH, seven in absentia homolog  
Aqu1.205333|PACid:15703861   0.000000000425   81-155   SIAH, seven in absentia homolog  
  0.000719   148-204   SIAH, seven in absentia homolog  
Aqu1.205406|PACid:15703934   4.58e-22   652-787   MATH domain  
  3.43e-20   807-961   MATH domain  
Aqu1.205515|PACid:15704043   0.00000000373   79-160   SIAH, seven in absentia homolog  
  0.0288   175-233   SIAH, seven in absentia homolog  
Aqu1.205529|PACid:15704057   0.0000157   142-200   SIAH, seven in absentia homolog  
  0.000177   81-148   SIAH, seven in absentia homolog  
Aqu1.205697|PACid:15704225   0.000000000000719   76-149   SIAH, seven in absentia homolog  
  0.00000000752   167-221   SIAH, seven in absentia homolog  
Aqu1.205698|PACid:15704226   1.29e-30   255-402   MATH domain  
  0.000000000000222   80-154   MATH domain  
  0.000000000392   176-238   SIAH, seven in absentia homolog  
Aqu1.205699|PACid:15704227   3.6e-33   108-248   MATH domain  
  0.00000121   22-74   SIAH, seven in absentia homolog  
Aqu1.205845|PACid:15704373   0.000000131   159-211   SIAH, seven in absentia homolog  
  0.000000242   86-152   SIAH, seven in absentia homolog  
  0.00265   235-276   MATH domain  
Aqu1.205846|PACid:15704374   1.64e-33   252-409   MATH domain  
  2.75e-16   87-155   SIAH, seven in absentia homolog  
  0.00000000785   174-234   SIAH, seven in absentia homolog  
Aqu1.205847|PACid:15704375   7.19e-26   341-480   MATH domain  
  0.000000000000085   88-159   SIAH, seven in absentia homolog  
  0.000000000785   174-227   SIAH, seven in absentia homolog  
Aqu1.205848|PACid:15704376   2.45e-30   343-482   MATH domain  
  0.0000000000000242   86-158   SIAH, seven in absentia homolog  
  0.0000000000294   173-226   SIAH, seven in absentia homolog  
Aqu1.205864|PACid:15704392   0.000000000111   102-163   SIAH, seven in absentia homolog  
Aqu1.205975|PACid:15704503   0.0000000118   78-138   SIAH, seven in absentia homolog  
  0.00000438   115-190   SIAH, seven in absentia homolog  
Aqu1.205977|PACid:15704505   1.1e-44   45-196   MATH domain  
Aqu1.206021|PACid:15704549   0.000000000504   102-158   SIAH, seven in absentia homolog  
Aqu1.206155|PACid:15704683   0.000000000085   79-154   SIAH, seven in absentia homolog  
  0.00017   146-236   SIAH, seven in absentia homolog  
Aqu1.206156|PACid:15704684   0.000000464   79-151   SIAH, seven in absentia homolog  
  0.00229   146-234   SIAH, seven in absentia homolog  
Aqu1.206223|PACid:15704751   0.0000000477   10-68   SIAH, seven in absentia homolog  
Aqu1.206439|PACid:15704967   8.83e-45   142-293   MATH domain  
Aqu1.206440|PACid:15704968   0.000000000948   78-138   SIAH, seven in absentia homolog  
  0.00000915   139-197   SIAH, seven in absentia homolog  
Aqu1.206465|PACid:15704993   0.0000000000484   81-162   SIAH, seven in absentia homolog  
  0.0000333   175-227   SIAH, seven in absentia homolog  
Aqu1.206539|PACid:15705067   1.5e-24   313-444   MATH domain  
  0.0000000000000425   240-307   MATH domain  
  0.00000752   136-188   SIAH, seven in absentia homolog  
Aqu1.206668|PACid:15705196   0.0000000497   181-236   SIAH, seven in absentia homolog  
  0.00000019   86-158   SIAH, seven in absentia homolog  
Aqu1.206669|PACid:15705197   0.00000268   88-160   SIAH, seven in absentia homolog  
  0.000719   183-235   SIAH, seven in absentia homolog  
Aqu1.206892|PACid:15705420   0.0000000000602   81-194   SIAH, seven in absentia homolog  
Aqu1.206937|PACid:15705465   0.0000000000262   89-224   MATH domain  
  0.00595   4-90   SIAH, seven in absentia homolog  
Aqu1.207061|PACid:15705589   8.01e-30   400-550   MATH domain  
  0.000000000000105   76-148   SIAH, seven in absentia homolog  
  0.000034   167-221   SIAH, seven in absentia homolog  
Aqu1.207062|PACid:15705590   0.000000556   85-130   SIAH, seven in absentia homolog  
  0.00000209   23-64   SIAH, seven in absentia homolog  
Aqu1.207071|PACid:15705599   0.0000000347   81-160   SIAH, seven in absentia homolog  
  0.000235   176-234   SIAH, seven in absentia homolog  
Aqu1.207120|PACid:15705648   0.00000000602   81-157   SIAH, seven in absentia homolog  
Aqu1.207375|PACid:15705903   0.000000118   80-160   SIAH, seven in absentia homolog  
  0.00203   162-234   SIAH, seven in absentia homolog  
Aqu1.207376|PACid:15705904   0.0000000196   81-154   SIAH, seven in absentia homolog  
  0.0000425   194-237   SIAH, seven in absentia homolog  
Aqu1.207377|PACid:15705905   0.0000000196   81-163   SIAH, seven in absentia homolog  
  0.0085   148-238   SIAH, seven in absentia homolog  
Aqu1.207378|PACid:15705906   0.000000085   81-153   SIAH, seven in absentia homolog  
Aqu1.207422|PACid:15705950   0.00000262   81-108   SIAH, seven in absentia homolog  
Aqu1.207470|PACid:15705998   1.8e-31   10-161   MATH domain  
Aqu1.207471|PACid:15705999   4.25e-26   181-307   MATH domain  
  0.000000000000032   86-169   SIAH, seven in absentia homolog  
Aqu1.207472|PACid:15706000   1.62e-27   212-356   MATH domain  
  0.0000000000915   87-144   SIAH, seven in absentia homolog  
Aqu1.207473|PACid:15706001   6.05e-29   298-441   MATH domain  
  0.0000000000000124   90-158   SIAH, seven in absentia homolog  
  0.00000163   177-234   SIAH, seven in absentia homolog  
Aqu1.207474|PACid:15706002   0.000000000000268   87-144   SIAH, seven in absentia homolog  
Aqu1.207489|PACid:15706017   1.96e-44   322-470   MATH domain  
  0.015   93-149   SIAH, seven in absentia homolog  
Aqu1.207490|PACid:15706018   3.6e-43   744-890   MATH domain  
  2.45e-38   313-455   MATH domain  
  0.00000301   115-196   SIAH, seven in absentia homolog  
  0.0000301   546-596   SIAH, seven in absentia homolog  
  0.000981   512-540   SIAH, seven in absentia homolog  
Aqu1.207542|PACid:15706070   0.000000000981   81-157   SIAH, seven in absentia homolog  
  0.00281   175-227   SIAH, seven in absentia homolog  
Aqu1.207548|PACid:15706076   3.27e-21   319-468   MATH domain  
  0.000000000242   91-154   SIAH, seven in absentia homolog  
  0.0000785   155-202   SIAH, seven in absentia homolog  
Aqu1.207783|PACid:15706311   0.0000000451   81-160   SIAH, seven in absentia homolog  
Aqu1.208374|PACid:15706902   2.62e-24   421-557   MATH domain  
  1.13e-20   577-732   MATH domain  
Aqu1.208429|PACid:15706957   1.8e-22   2-117   MATH domain  
Aqu1.208703|PACid:15707231   0.0000000209   90-154   SIAH, seven in absentia homolog  
Aqu1.208714|PACid:15707242   8.99e-19   2-154   MATH domain  
Aqu1.209624|PACid:15708152   4.58e-29   249-398   MATH domain  
  0.0000000000000144   86-158   SIAH, seven in absentia homolog  
  0.0000000000085   173-234   SIAH, seven in absentia homolog  
Aqu1.209625|PACid:15708153   0.00000000000209   86-155   SIAH, seven in absentia homolog  
  0.0000000271   175-229   SIAH, seven in absentia homolog  
  0.0785   253-286   MATH domain  
Aqu1.209626|PACid:15708154   4.25e-32   250-401   MATH domain  
  0.0000000000000203   86-155   SIAH, seven in absentia homolog  
  0.0000000000118   174-232   SIAH, seven in absentia homolog  
Aqu1.209627|PACid:15708155   4.74e-26   247-386   MATH domain  
  0.0000000000386   73-126   SIAH, seven in absentia homolog  
  0.00000032   3-58   SIAH, seven in absentia homolog  
Aqu1.209628|PACid:15708156   1.7e-16   87-155   SIAH, seven in absentia homolog  
  0.00000000000883   174-241   SIAH, seven in absentia homolog  
Aqu1.209629|PACid:15708157   2.94e-31   250-401   MATH domain  
  0.00000000000000111   89-158   SIAH, seven in absentia homolog  
  0.0000000032   177-238   SIAH, seven in absentia homolog  
Aqu1.209630|PACid:15708158   4.58e-29   283-424   MATH domain  
  0.0000000000085   81-154   SIAH, seven in absentia homolog  
  0.00000000785   147-225   SIAH, seven in absentia homolog  
Aqu1.209701|PACid:15708229   1.08e-29   270-414   MATH domain  
  0.0000000255   175-242   SIAH, seven in absentia homolog  
  0.0000000425   86-143   SIAH, seven in absentia homolog  
Aqu1.210049|PACid:15708577   0.00000000000000245   133-221   MATH domain  
  0.00867   4-69   MATH domain  
Aqu1.210051|PACid:15708579   2.78e-17   951-1104   MATH domain  
  0.0000000327   798-892   MATH domain  
Aqu1.210537|PACid:15709065   0.00000000000222   1-64   SIAH, seven in absentia homolog  
  0.000000262   79-123   MATH domain  
Aqu1.210574|PACid:15709102   4.41e-27   103-248   MATH domain  
  0.000000719   2-50   SIAH, seven in absentia homolog  
  0.00255   51-76   SIAH, seven in absentia homolog  
Aqu1.210575|PACid:15709103   2.29e-20   253-373   MATH domain  
  0.00000000000137   83-153   SIAH, seven in absentia homolog  
  0.0000000229   147-200   SIAH, seven in absentia homolog  
  0.00497   201-226   SIAH, seven in absentia homolog  
Aqu1.210870|PACid:15709398   2.45e-44   366-517   MATH domain  
  0.000000000785   78-138   SIAH, seven in absentia homolog  
  0.00000634   138-211   SIAH, seven in absentia homolog  
Aqu1.210871|PACid:15709399   1.44e-43   302-453   MATH domain  
  0.00000000425   78-159   SIAH, seven in absentia homolog  
Aqu1.210896|PACid:15709424   0.00000000137   81-192   SIAH, seven in absentia homolog  
Aqu1.210897|PACid:15709425   0.000000000438   81-156   SIAH, seven in absentia homolog  
  0.000373   148-236   SIAH, seven in absentia homolog  
Aqu1.211177|PACid:15709705   0.0000000203   82-162   SIAH, seven in absentia homolog  
  0.0157   151-206   SIAH, seven in absentia homolog  
Aqu1.211365|PACid:15709893   0.000000105   735-789   SIAH, seven in absentia homolog  
Aqu1.211596|PACid:15710124   0.0000085   81-157   SIAH, seven in absentia homolog  
Aqu1.211597|PACid:15710125   0.0000785   1-51   SIAH, seven in absentia homolog  
Aqu1.211599|PACid:15710127   0.00000206   81-161   SIAH, seven in absentia homolog  
  0.0000085   174-235   SIAH, seven in absentia homolog  
Aqu1.211600|PACid:15710128   0.0000000118   221-295   SIAH, seven in absentia homolog  
  0.00000608   38-96   SIAH, seven in absentia homolog  
  0.0000719   315-371   SIAH, seven in absentia homolog  
Aqu1.211602|PACid:15710130   0.0000451   12-85   SIAH, seven in absentia homolog  
  0.0085   104-164   SIAH, seven in absentia homolog  
Aqu1.211735|PACid:15710263   0.0000000177   77-150   SIAH, seven in absentia homolog  
Aqu1.212342|PACid:15710870   1.8e-23   801-938   MATH domain  
  2.78e-21   962-1114   MATH domain  
Aqu1.212431|PACid:15710959   0.00000000000000159   7-89   MATH domain  
Aqu1.212563|PACid:15711091   0.000000000109   3-69   MATH domain  
Aqu1.213073|PACid:15711601   0.0000196   81-108   SIAH, seven in absentia homolog  
Aqu1.213519|PACid:15712047   0.00000000589   99-156   SIAH, seven in absentia homolog  
Aqu1.213747|PACid:15712275   9.48e-22   237-363   MATH domain  
  0.00000000000015   93-151   SIAH, seven in absentia homolog  
Aqu1.213901|PACid:15712429   0.0000000932   106-178   MATH domain  
  0.00000589   5-34   SIAH, seven in absentia homolog  
  0.00118   46-85   SIAH, seven in absentia homolog  
Aqu1.214947|PACid:15713475   0.0000000275   195-274   SIAH, seven in absentia homolog  
  0.0000621   106-193   SIAH, seven in absentia homolog  
Aqu1.214948|PACid:15713476   0.00000229   122-208   SIAH, seven in absentia homolog  
  0.0000582   214-264   SIAH, seven in absentia homolog  
Aqu1.215216|PACid:15713744   3.6e-18   226-309   MATH domain  
  0.00000000785   48-109   SIAH, seven in absentia homolog  
  0.0000000981   126-179   SIAH, seven in absentia homolog  
Aqu1.215318|PACid:15713846   0.000000000000576   247-385   MATH domain  
  0.0000000157   146-199   SIAH, seven in absentia homolog  
  0.00000654   85-152   SIAH, seven in absentia homolog  
Aqu1.215326|PACid:15713854   1.57e-23   249-391   MATH domain  
  0.000000000177   86-156   SIAH, seven in absentia homolog  
Aqu1.215327|PACid:15713855   1.03e-27   262-412   MATH domain  
  0.0000000000019   98-172   SIAH, seven in absentia homolog  
  0.000000124   186-241   SIAH, seven in absentia homolog  
Aqu1.215328|PACid:15713856   5.89e-30   259-407   MATH domain  
  0.0000000000000556   95-168   SIAH, seven in absentia homolog  
  0.0000000000451   183-237   SIAH, seven in absentia homolog  
Aqu1.215330|PACid:15713858   2.49e-32   151-306   MATH domain  
  0.0000000053   47-98   SIAH, seven in absentia homolog  
  0.0000000105   81-133   SIAH, seven in absentia homolog  
  0.000000229   3-47   SIAH, seven in absentia homolog  
Aqu1.215331|PACid:15713859   1.64e-33   250-401   MATH domain  
  2.88e-16   87-158   SIAH, seven in absentia homolog  
  0.00000000327   174-225   SIAH, seven in absentia homolog  
Aqu1.215332|PACid:15713860   6.21e-31   248-396   MATH domain  
  0.000000000000019   86-153   SIAH, seven in absentia homolog  
  0.000000019   173-228   SIAH, seven in absentia homolog  
Aqu1.215333|PACid:15713861   1.8e-30   249-403   MATH domain  
  3.6e-16   87-154   SIAH, seven in absentia homolog  
  0.00000000654   174-233   SIAH, seven in absentia homolog  
Aqu1.215334|PACid:15713862   1.64e-27   250-394   MATH domain  
  0.000000000000036   86-156   SIAH, seven in absentia homolog  
  0.0000000137   174-235   SIAH, seven in absentia homolog  
Aqu1.215335|PACid:15713863   8.5e-27   281-421   MATH domain  
  0.00000000000549   81-154   SIAH, seven in absentia homolog  
  0.0000000196   147-224   SIAH, seven in absentia homolog  
Aqu1.215336|PACid:15713864   1.64e-33   266-411   MATH domain  
  0.000000000000105   81-153   SIAH, seven in absentia homolog  
  0.0000229   184-225   SIAH, seven in absentia homolog  
  0.000981   145-184   SIAH, seven in absentia homolog  
Aqu1.215337|PACid:15713865   1.19e-26   148-298   MATH domain  
  0.0000497   60-136   SIAH, seven in absentia homolog  
Aqu1.215338|PACid:15713866   4.91e-31   259-413   MATH domain  
  0.00000000000152   176-231   SIAH, seven in absentia homolog  
  0.00000000000575   90-157   SIAH, seven in absentia homolog  
Aqu1.215339|PACid:15713867   1.64e-24   291-438   MATH domain  
  0.000000000000183   101-168   SIAH, seven in absentia homolog  
  0.00000000222   187-243   SIAH, seven in absentia homolog  
Aqu1.215685|PACid:15714213   0.000000183   83-149   SIAH, seven in absentia homolog  
  0.0000242   144-201   SIAH, seven in absentia homolog  
Aqu1.215749|PACid:15714277   3.11e-44   363-514   MATH domain  
  0.0000000719   77-139   SIAH, seven in absentia homolog  
  0.00000477   138-209   SIAH, seven in absentia homolog  
Aqu1.216435|PACid:15714963   0.00000265   176-231   SIAH, seven in absentia homolog  
  0.0000144   81-153   SIAH, seven in absentia homolog  
Aqu1.216436|PACid:15714964   0.00000000294   198-253   SIAH, seven in absentia homolog  
  0.00000015   103-175   SIAH, seven in absentia homolog  
Aqu1.216438|PACid:15714966   0.00000000131   178-233   SIAH, seven in absentia homolog  
  0.0000000654   86-159   SIAH, seven in absentia homolog  
Aqu1.216440|PACid:15714968   0.0000000785   153-230   SIAH, seven in absentia homolog  
  0.0000049   247-299   SIAH, seven in absentia homolog  
Aqu1.216441|PACid:15714969   0.00000589   621-679   SIAH, seven in absentia homolog  
  0.00051   526-598   SIAH, seven in absentia homolog  
Aqu1.216658|PACid:15715186   1.14e-23   671-808   MATH domain  
  5.23e-21   830-982   MATH domain  
Aqu1.217813|PACid:15716341   0.000000000177   81-153   SIAH, seven in absentia homolog  
  0.000399   148-221   SIAH, seven in absentia homolog  
Aqu1.217814|PACid:15716342   0.000000000785   79-151   SIAH, seven in absentia homolog  
  0.00124   147-234   SIAH, seven in absentia homolog  
Aqu1.217816|PACid:15716344   0.000000000981   89-192   SIAH, seven in absentia homolog  
  0.0015   202-242   SIAH, seven in absentia homolog  
Aqu1.217818|PACid:15716346   0.000000000386   80-156   SIAH, seven in absentia homolog  
  0.000229   174-234   SIAH, seven in absentia homolog  
Aqu1.217823|PACid:15716351   0.00000000105   84-158   SIAH, seven in absentia homolog  
  0.00262   151-239   SIAH, seven in absentia homolog  
Aqu1.217824|PACid:15716352   0.000000000549   81-156   SIAH, seven in absentia homolog  
  0.000458   180-227   SIAH, seven in absentia homolog  
Aqu1.217880|PACid:15716408   2.94e-19   245-367   MATH domain  
Aqu1.217976|PACid:15716504   0.000000085   81-156   SIAH, seven in absentia homolog  
  0.00000232   176-230   SIAH, seven in absentia homolog  
Aqu1.218143|PACid:15716671   1.52e-19   495-632   MATH domain  
  0.000000392   188-254   SIAH, seven in absentia homolog  
  0.0314   97-169   SIAH, seven in absentia homolog  
Aqu1.218209|PACid:15716737   0.0000183   411-478   SIAH, seven in absentia homolog  
Aqu1.218244|PACid:15716772   1.13e-24   83-215   MATH domain  
Aqu1.218550|PACid:15717078   6.87e-17   450-558   MATH domain  
Aqu1.218598|PACid:15717126   0.00000036   85-146   SIAH, seven in absentia homolog  
  0.000262   256-360   MATH domain  
Aqu1.218605|PACid:15717133   0.00000000916   281-362   MATH domain  
  0.0000000242   86-176   SIAH, seven in absentia homolog  
Aqu1.218758|PACid:15717286   0.00000141   87-170   SIAH, seven in absentia homolog  
Aqu1.218759|PACid:15717287   0.00000144   104-154   SIAH, seven in absentia homolog  
  0.00000327   140-203   SIAH, seven in absentia homolog  
Aqu1.218760|PACid:15717288   0.0000111   186-265   SIAH, seven in absentia homolog  
  0.0105   113-169   SIAH, seven in absentia homolog  
Aqu1.218820|PACid:15717348   0.00000000634   81-153   SIAH, seven in absentia homolog  
  0.00000386   185-232   SIAH, seven in absentia homolog  
Aqu1.218823|PACid:15717351   0.0000105   256-333   SIAH, seven in absentia homolog  
  0.000916   350-409   SIAH, seven in absentia homolog  
Aqu1.219139|PACid:15717667   0.0000000785   81-179   SIAH, seven in absentia homolog  
Aqu1.219545|PACid:15718073   2.62e-24   461-603   MATH domain  
  0.000000549   91-153   SIAH, seven in absentia homolog  
Aqu1.219713|PACid:15718241   5.89e-38   415-565   MATH domain  
  0.000000000932   138-207   MATH domain  
  0.0915   90-156   SIAH, seven in absentia homolog  
Aqu1.219714|PACid:15718242   7.36e-42   269-417   MATH domain  
Aqu1.219716|PACid:15718244   4.09e-42   527-672   MATH domain  
  0.000000015   92-149   SIAH, seven in absentia homolog  
  0.0000562   287-335   SIAH, seven in absentia homolog  
  0.00615   319-370   SIAH, seven in absentia homolog  
Aqu1.219717|PACid:15718245   9.48e-43   257-402   MATH domain  
  0.000000719   87-158   SIAH, seven in absentia homolog  
Aqu1.219722|PACid:15718250   3.11e-44   337-485   MATH domain  
  0.0000392   95-133   SIAH, seven in absentia homolog  
  0.00785   126-176   SIAH, seven in absentia homolog  
Aqu1.219725|PACid:15718253   2.94e-44   332-480   MATH domain  
  0.0000124   94-132   SIAH, seven in absentia homolog  
  0.00379   125-175   SIAH, seven in absentia homolog  
Aqu1.219821|PACid:15718349   0.00000392   174-233   SIAH, seven in absentia homolog  
  0.0000209   81-166   SIAH, seven in absentia homolog  
Aqu1.219822|PACid:15718350   0.000000144   71-118   SIAH, seven in absentia homolog  
Aqu1.219919|PACid:15718447   5.89e-23   704-839   MATH domain  
  8.5e-18   859-1014   MATH domain  
Aqu1.220413|PACid:15718941   1.8e-25   370-520   MATH domain  
  0.0000000000124   102-181   SIAH, seven in absentia homolog  
  0.00000000216   190-273   SIAH, seven in absentia homolog  
Aqu1.220414|PACid:15718942   8.18e-26   352-502   MATH domain  
  0.00000000000425   99-174   SIAH, seven in absentia homolog  
  0.00000000392   187-261   SIAH, seven in absentia homolog  
Aqu1.220699|PACid:15719227   0.00000000183   40-103   SIAH, seven in absentia homolog  
  0.0386   103-128   SIAH, seven in absentia homolog  
Aqu1.221347|PACid:15719875   1.7e-29   250-387   MATH domain  
  0.000000000085   89-159   SIAH, seven in absentia homolog  
  0.00000327   147-225   SIAH, seven in absentia homolog  
Aqu1.221348|PACid:15719876   5.23e-27   253-402   MATH domain  
  0.00000000432   95-163   SIAH, seven in absentia homolog  
  0.00000147   155-228   SIAH, seven in absentia homolog  
Aqu1.221350|PACid:15719878   3.66e-27   240-388   MATH domain  
  0.000000000719   85-152   SIAH, seven in absentia homolog  
  0.0000000278   144-244   SIAH, seven in absentia homolog  
Aqu1.221351|PACid:15719879   2.88e-27   246-394   MATH domain  
  0.00000000209   89-164   SIAH, seven in absentia homolog  
  0.0000000218   174-227   SIAH, seven in absentia homolog  
Aqu1.221352|PACid:15719880   2.62e-29   246-395   MATH domain  
  0.0000000017   164-225   SIAH, seven in absentia homolog  
  0.00000000719   88-154   SIAH, seven in absentia homolog  
Aqu1.221475|PACid:15720003   0.000000000785   81-183   SIAH, seven in absentia homolog  
  0.00000111   189-236   SIAH, seven in absentia homolog  
Aqu1.221476|PACid:15720004   0.0000000111   81-158   SIAH, seven in absentia homolog  
  0.000379   148-214   SIAH, seven in absentia homolog  
Aqu1.221477|PACid:15720005   0.00000000464   81-157   SIAH, seven in absentia homolog  
  0.0392   148-238   SIAH, seven in absentia homolog  
Aqu1.221478|PACid:15720006   0.0000000785   81-152   SIAH, seven in absentia homolog  
  0.000981   148-235   SIAH, seven in absentia homolog  
Aqu1.221479|PACid:15720007   0.000000000196   81-158   SIAH, seven in absentia homolog  
  0.000000719   175-258   SIAH, seven in absentia homolog  
Aqu1.221986|PACid:15720514   7.36e-43   327-476   MATH domain  
  0.00000000438   83-142   SIAH, seven in absentia homolog  
  0.000000118   140-207   SIAH, seven in absentia homolog  
Aqu1.222033|PACid:15720561   0.00000000268   87-144   SIAH, seven in absentia homolog  
Aqu1.222860|PACid:15721388   0.0000000432   81-153   SIAH, seven in absentia homolog  
  0.00034   150-225   SIAH, seven in absentia homolog  
Aqu1.223056|PACid:15721584   2.94e-44   332-480   MATH domain  
  0.000124   103-138   SIAH, seven in absentia homolog  
  0.00118   134-184   SIAH, seven in absentia homolog  
Aqu1.223212|PACid:15721740   2.94e-30   264-417   MATH domain  
  0.0000000000000536   79-155   SIAH, seven in absentia homolog  
  0.0000000484   170-224   SIAH, seven in absentia homolog  
Aqu1.223213|PACid:15721741   0.00000000000015   15-77   SIAH, seven in absentia homolog  
Aqu1.223214|PACid:15721742   3.92e-34   275-424   MATH domain  
  0.00000000000536   79-155   SIAH, seven in absentia homolog  
  0.000000915   143-197   SIAH, seven in absentia homolog  
  0.0366   198-223   SIAH, seven in absentia homolog  
Aqu1.223216|PACid:15721744   5.4e-32   289-441   MATH domain  
  0.0000000000000122   101-179   SIAH, seven in absentia homolog  
  0.00000000000301   192-252   SIAH, seven in absentia homolog  
Aqu1.223217|PACid:15721745   3.92e-27   217-352   MATH domain  
  0.0000000183   134-217   SIAH, seven in absentia homolog  
  0.000019   75-122   SIAH, seven in absentia homolog  
Aqu1.223218|PACid:15721746   4.09e-29   254-408   MATH domain  
  0.000000000000915   89-161   SIAH, seven in absentia homolog  
  0.0000000268   181-235   SIAH, seven in absentia homolog  
Aqu1.223220|PACid:15721748   7.19e-34   257-408   MATH domain  
  0.0000000000000523   87-161   SIAH, seven in absentia homolog  
  0.000000000281   175-236   SIAH, seven in absentia homolog  
Aqu1.223221|PACid:15721749   1.96e-20   273-439   MATH domain  
  0.0000000000000242   92-169   SIAH, seven in absentia homolog  
  0.000000000654   183-245   SIAH, seven in absentia homolog  
Aqu1.223239|PACid:15721767   2.94e-24   392-529   MATH domain  
  0.0000137   78-149   SIAH, seven in absentia homolog  
  0.00569   165-227   SIAH, seven in absentia homolog  
Aqu1.223240|PACid:15721768   0.00000000719   182-249   SIAH, seven in absentia homolog  
  0.000000053   98-159   SIAH, seven in absentia homolog  
Aqu1.223241|PACid:15721769   0.00000017   170-257   SIAH, seven in absentia homolog  
  0.000000981   78-157   SIAH, seven in absentia homolog  
  0.0305   359-408   MATH domain  
Aqu1.223248|PACid:15721776   2.16e-54   81-269   SIAH, seven in absentia homolog  
Aqu1.223254|PACid:15721782   6.67e-17   332-491   MATH domain  
  0.000000000144   78-155   SIAH, seven in absentia homolog  
  0.00000000333   142-238   SIAH, seven in absentia homolog  
Aqu1.223747|PACid:15722275   0.0000000000602   141-210   SIAH, seven in absentia homolog  
  0.00412   203-242   SIAH, seven in absentia homolog  
Aqu1.223780|PACid:15722308   0.0000981   181-240   SIAH, seven in absentia homolog  
Aqu1.223863|PACid:15722391   0.00000000177   211-265   SIAH, seven in absentia homolog  
  0.00000000248   118-191   SIAH, seven in absentia homolog  
Aqu1.223932|PACid:15722460   1.44e-42   349-498   MATH domain  
  0.000000000032   96-154   SIAH, seven in absentia homolog  
Aqu1.224073|PACid:15722601   6.87e-27   545-689   MATH domain  
  0.0000000719   266-338   SIAH, seven in absentia homolog  
Aqu1.224653|PACid:15723181   0.0000000053   74-123,150-175   SIAH, seven in absentia homolog  
Aqu1.225641|PACid:15724169   2.62e-16   332-448   MATH domain  
  0.00000000445   173-233   SIAH, seven in absentia homolog  
  0.00000000575   84-157   SIAH, seven in absentia homolog  
Aqu1.225761|PACid:15724289   1.8e-24   296-414   MATH domain  
  0.00000000523   87-149   SIAH, seven in absentia homolog  
Aqu1.226374|PACid:15724902   1.26e-23   750-884   MATH domain  
  3.6e-21   909-1059   MATH domain  
Aqu1.226445|PACid:15724973   0.000000981   95-170   SIAH, seven in absentia homolog  
  0.0000654   161-214   SIAH, seven in absentia homolog  
  0.0647   216-241   SIAH, seven in absentia homolog  
Aqu1.227144|PACid:15725672   0.00000000105   8-79   SIAH, seven in absentia homolog  
Aqu1.227303|PACid:15725831   0.0000000015   81-146   SIAH, seven in absentia homolog  
  0.000248   141-181   SIAH, seven in absentia homolog  
Aqu1.227538|PACid:15726066   6.05e-44   329-477   MATH domain  
  0.00000248   103-174   SIAH, seven in absentia homolog  
  0.00333   162-225   SIAH, seven in absentia homolog  
Aqu1.227657|PACid:15726185   2.45e-22   361-507   MATH domain  
  0.00000000543   159-221   SIAH, seven in absentia homolog  
  0.0000144   217-272   SIAH, seven in absentia homolog  
Aqu1.227857|PACid:15726385   2.62e-38   366-492   MATH domain  
  0.00000000085   78-141   SIAH, seven in absentia homolog  
  0.000549   139-186   SIAH, seven in absentia homolog  
  0.0248   191-220   SIAH, seven in absentia homolog  
Aqu1.227858|PACid:15726386   7.36e-47   366-515   MATH domain  
  0.00000000144   78-139   SIAH, seven in absentia homolog  
  0.000373   139-186   SIAH, seven in absentia homolog  
  0.00432   175-223   SIAH, seven in absentia homolog  
Aqu1.227876|PACid:15726404   6.7e-22   267-393   MATH domain  
  0.0000000000425   98-163   SIAH, seven in absentia homolog  
  0.000451   156-210   SIAH, seven in absentia homolog  
  0.000719   203-244   MATH domain  
Aqu1.227878|PACid:15726406   1.62e-21   273-396   MATH domain  
  0.0000000118   105-169   SIAH, seven in absentia homolog  
  0.000281   190-250   SIAH, seven in absentia homolog  
Aqu1.227880|PACid:15726408   8.99e-23   269-415   MATH domain  
  0.00000000118   106-169   SIAH, seven in absentia homolog  
  0.0000017   191-245   SIAH, seven in absentia homolog  
Aqu1.227882|PACid:15726410   0.00000000229   23-93   SIAH, seven in absentia homolog  
Aqu1.227884|PACid:15726412   1.1e-21   279-388   MATH domain  
  0.0000000981   105-169   SIAH, seven in absentia homolog  
  0.00000425   191-243   SIAH, seven in absentia homolog  
Aqu1.227885|PACid:15726413   1.16e-24   271-402   MATH domain  
  0.000111   88-160   SIAH, seven in absentia homolog  
Aqu1.228274|PACid:15726802   3.27e-21   106-256   MATH domain  
Aqu1.228557|PACid:15727085   0.0000000000294   2454-2509   SIAH, seven in absentia homolog  
Aqu1.229194|PACid:15727722   0.000000000817   115-211   SIAH, seven in absentia homolog  
Aqu1.229196|PACid:15727724   0.00000255   114-209   SIAH, seven in absentia homolog  
Aqu1.229482|PACid:15728010   0.00000255   100-169   SIAH, seven in absentia homolog  
Aqu1.229557|PACid:15728085   0.0000000536   1-74   SIAH, seven in absentia homolog  
Aqu1.229562|PACid:15728090   0.0000183   758-820   SIAH, seven in absentia homolog  
Aqu1.229661|PACid:15728189   9.65e-18   356-457   MATH domain  
  0.00477   164-250   SIAH, seven in absentia homolog  
Aqu1.229718|PACid:15728246   1.52e-21   291-436   MATH domain  
  0.0000000000589   10-98   MATH domain  
  0.0000000000899   127-266   MATH domain  
Aqu1.229719|PACid:15728247   1.08e-21   166-307   MATH domain  
  0.0000000000245   8-138   MATH domain  
  0.00105   337-379   MATH domain  
Aqu1.229721|PACid:15728249   2.13e-22   349-480   MATH domain  
  3.92e-17   498-630   MATH domain  
  0.00000000000000768   1007-1133   MATH domain  
  0.0000000000000103   656-797   MATH domain  
  0.000000000000018   169-289   MATH domain  
  0.00000000121   826-909   MATH domain  
  0.000000118   81-149   SIAH, seven in absentia homolog  
Aqu1.229725|PACid:15728253   0.000000000432   76-140   SIAH, seven in absentia homolog  
Aqu1.229726|PACid:15728254   0.000000000915   76-136   SIAH, seven in absentia homolog  
Aqu1.229728|PACid:15728256   0.00000111   80-110   SIAH, seven in absentia homolog  
Aqu1.229780|PACid:15728308   0.00000458   74-140   SIAH, seven in absentia homolog  
  0.000305   213-286   MATH domain  
Aqu1.229919|PACid:15728447   6.47e-16   86-153   SIAH, seven in absentia homolog  
Aqu1.229921|PACid:15728449   4.58e-26   253-396   MATH domain  
  0.00000000000196   83-153   SIAH, seven in absentia homolog  
  0.0000000242   146-200   SIAH, seven in absentia homolog  
  0.00719   201-226   SIAH, seven in absentia homolog  
 
Weak hits:
Aqu1.200902|PACid:15699430   0.000392   91-153   SIAH, seven in absentia homolog  
Aqu1.204135|PACid:15702663   0.00484   81-157   SIAH, seven in absentia homolog  
Aqu1.205516|PACid:15704044   0.000111   121-183   SIAH, seven in absentia homolog  
Aqu1.207121|PACid:15705649   0.00019   81-155   SIAH, seven in absentia homolog  
  0.00569   166-234   SIAH, seven in absentia homolog  
Aqu1.207122|PACid:15705650   0.000105   81-153   SIAH, seven in absentia homolog  
  0.0036   175-227   SIAH, seven in absentia homolog  
Aqu1.209861|PACid:15708389   0.000255   89-163   SIAH, seven in absentia homolog  
  0.0137   182-234   SIAH, seven in absentia homolog  
Aqu1.211598|PACid:15710126   0.00019   11-53   SIAH, seven in absentia homolog  
  0.0015   48-137   SIAH, seven in absentia homolog  
Aqu1.211601|PACid:15710129   0.00203   78-102   SIAH, seven in absentia homolog  
Aqu1.212990|PACid:15711518   0.0545   29-97   MATH domain  
Aqu1.213066|PACid:15711594   0.085   78-99   SIAH, seven in absentia homolog  
Aqu1.213287|PACid:15711815   0.000131   83-110   SIAH, seven in absentia homolog  
Aqu1.213288|PACid:15711816   0.000183   83-111   SIAH, seven in absentia homolog  
Aqu1.213732|PACid:15712260   0.000615   1105-1169   SIAH, seven in absentia homolog  
Aqu1.216018|PACid:15714546   0.000915   142-213   SIAH, seven in absentia homolog  
  0.0242   79-160   SIAH, seven in absentia homolog  
Aqu1.216437|PACid:15714965   0.0216   81-174   SIAH, seven in absentia homolog  
Aqu1.217822|PACid:15716350   0.00144   74-134   SIAH, seven in absentia homolog  
Aqu1.218214|PACid:15716742   0.000981   450-531   SIAH, seven in absentia homolog  
  0.0235   545-600   SIAH, seven in absentia homolog  
Aqu1.219221|PACid:15717749   0.00111   87-167   SIAH, seven in absentia homolog  
  0.00471   197-242   SIAH, seven in absentia homolog  
Aqu1.219223|PACid:15717751   0.000504   94-167   SIAH, seven in absentia homolog  
Aqu1.219224|PACid:15717752   0.000981   243-309   SIAH, seven in absentia homolog  
  0.00275   159-239   SIAH, seven in absentia homolog  
Aqu1.219719|PACid:15718247   0.0163   92-146   SIAH, seven in absentia homolog  
Aqu1.221111|PACid:15719639   0.0719   1067-1115   MATH domain  
Aqu1.224541|PACid:15723069   0.0262   184-211,241-354   SIAH, seven in absentia homolog  
Aqu1.226425|PACid:15724953   0.051   161-205   SIAH, seven in absentia homolog  
Aqu1.226563|PACid:15725091   0.0523   529-553   SIAH, seven in absentia homolog  
Aqu1.226836|PACid:15725364   0.0654   233-262   SIAH, seven in absentia homolog  
Aqu1.229042|PACid:15727570   0.0262   72-103   SIAH, seven in absentia homolog  

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View all assignments containing a TRAF domain-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   96468 96468
No Yes Homo sapiens 76_38 Human 109 85
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 31 22
No Yes Gorilla gorilla 76_3.1 Western gorilla 39 30
No Yes Pongo abelii 76_2 Sumatran orangutan 32 22
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 40 27
No Yes Papio anubis 76 Olive baboon 34 25
No Yes Macaca mulatta 76_1 Rhesus monkey 53 38
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 76 56
No Yes Otolemur garnettii 76_3 Small-eared galago 41 32
No Yes Microcebus murinus 76_1 Gray mouse lemur 21 15
No Yes Rattus norvegicus 76_5.0 Norway rat 43 32
No Yes Mus musculus 76_38 House mouse 78 60
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 32 21
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 34 23
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 30 21
No Yes Cavia porcellus 76_3 Domestic guinea pig 52 41
No Yes Oryctolagus cuniculus 76_2 Rabbit 31 22
No Yes Ochotona princeps 76 American pika 25 17
No Yes Tupaia belangeri 76 Northern tree shrew 19 15
No Yes Sus scrofa 76_10.2 Pig 65 39
No Yes Bos taurus 76_3.1 Cattle 33 23
No Yes Ovis aries 76_3.1 Sheep 37 28
No Yes Vicugna pacos 76_1 Alpaca 18 13
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 31 21
No Yes Mustela putorius furo 76_1.0 Domestic ferret 33 23
No Yes Ailuropoda melanoleuca 76_1 Giant panda 42 26
No Yes Canis familiaris 76_3.1 Dog 39 29
No Yes Felis catus 76_6.2 Domestic cat 29 21
No Yes Equus caballus 76_2 Horse 29 22
No Yes Myotis lucifugus 76_2.0 Little brown bat 41 29
No Yes Pteropus vampyrus 76_1 Large flying fox 29 21
No Yes Sorex araneus 76_1 European shrew 21 15
No Yes Erinaceus europaeus 76 Western European hedgehog 26 20
No Yes Procavia capensis 76_1 Cape rock hyrax 26 20
No Yes Loxodonta africana 76_3 African savanna elephant 39 26
No Yes Echinops telfairi 76 Small Madagascar hedgehog 23 17
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 31 21
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 17 11
No Yes Macropus eugenii 76_1.0 Tammar wallaby 20 15
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 37 26
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 32 22
No Yes Ornithorhynchus anatinus 76_5 Platypus 25 17
No Yes Saccoglossus kowalevskii v3.0   127 69
No Yes Petromyzon marinus 76_7.0 Sea lamprey 19 13
No Yes Meleagris gallopavo 76_2 Turkey 38 26
No Yes Gallus gallus 76_4 Chicken 31 21
No Yes Anas platyrhynchos 76_1.0 Mallard 29 21
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 25 17
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 31 20
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 33 24
No Yes Anolis carolinensis 76_2.0 Green anole 30 22
No Yes Xenopus laevis African clawed frog 75 51
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 35 24
No Yes Latimeria chalumnae 76_1 Coelacanth 43 28
No Yes Lepisosteus oculatus 76 Spotted gar 43 28
No Yes Gadus morhua 76_1 Atlantic cod 31 25
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 41 31
No Yes Takifugu rubripes 76_4 Torafugu 123 79
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 50 39
No Yes Oryzias latipes 76_1 Japanese medaka 47 36
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 35 25
No Yes Poecilia formosa 76 Amazon molly 38 29
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 56 40
No Yes Astyanax mexicanus 76 Mexican tetra 46 32
No Yes Danio rerio 76_9 Zebrafish 73 48
No Yes Oikopleura dioica   13 13
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 30 23
No Yes Ciona intestinalis 76 Vase tunicate 21 16
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 31 26
No Yes Adineta vaga   134 121
No Yes Octopus bimaculoides 280   25 20
No Yes Crassostrea gigas 22 Pacific oyster 45 29
No Yes Lottia gigantea Owl limpet 34 30
No Yes Helobdella robusta   20 18
No Yes Capitella sp. I   31 23
No Yes Danaus plexippus OGS1.0 Monarch butterfly 16 13
No Yes Heliconius melpomene Postman butterfly 14 12
No Yes Bombyx mori Domestic silkworm 13 12
No Yes Nasonia vitripennis Jewel wasp 61 58
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 15 12
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 17 12
No Yes Linepithema humile v1.1 Argentine ant 18 13
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 16 12
No Yes Solenopsis invicta v.2.2.3 Red fire ant 14 10
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 14 11
No Yes Atta cephalotes v1.1   16 12
No Yes Camponotus floridanus v3.3 Florida carpenter ant 15 12
No Yes Lucilia cuprina Australian sheep blowfly 11 8
No Yes Drosophila grimshawi 1.3   15 12
No Yes Drosophila willistoni 1.3   17 14
No Yes Drosophila pseudoobscura 2.13   19 15
No Yes Drosophila persimilis 1.3   16 13
No Yes Drosophila suzukii   16 10
No Yes Drosophila yakuba 1.3   15 11
No Yes Drosophila simulans 1.3   14 10
No Yes Drosophila sechellia 1.3   16 12
No Yes Drosophila melanogaster 76_5 Fruit fly 35 25
No Yes Drosophila erecta 1.3   16 12
No Yes Drosophila ananassae 1.3   17 13
No Yes Drosophila virilis 1.2   16 13
No Yes Drosophila mojavensis 1.3   15 12
No Yes Megaselia scalaris 22   6 6
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 27 21
No Yes Culex pipiens quinquefasciatus Southern house mosquito 36 29
No Yes Anopheles darlingi 22 American malaria mosquito 19 13
No Yes Anopheles gambiae 49_3j African malaria mosquito 18 14
No Yes Tribolium castaneum 3.0 Red flour beetle 37 28
No Yes Pediculus humanus corporis (Early assembly) Human body louse 19 14
No Yes Acyrthosiphon pisum Pea aphid 9 7
No Yes Rhodnius prolixus 22   10 7
No Yes Daphnia pulex Common water flea 21 18
No Yes Strigamia maritima 22   78 56
No Yes Sarcoptes scabiei   10 9
No Yes Tetranychus urticae Two-spotted spider mite 18 14
No Yes Ixodes scapularis (Preliminary) Black-legged tick 68 56
No Yes Pristionchus pacificus   48 42
No Yes Meloidogyne incognita Southern root-knot nematode 30 30
No Yes Meloidogyne hapla   14 14
No Yes Onchocerca volvulus 22   11 11
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 12 12
No Yes Caenorhabditis japonica   15 15
No Yes Caenorhabditis brenneri   105 95
No Yes Caenorhabditis remanei   99 94
No Yes Caenorhabditis elegans 76_235 Roundworm 214 128
No Yes Caenorhabditis briggsae 2   62 56
No Yes Trichinella spiralis 22   8 7
No Yes Hymenolepis microstoma   8 6
No Yes Echinococcus multilocularis   16 13
No Yes Echinococcus granulosus   15 13
No Yes Taenia solium Pork tapeworm 20 17
No Yes Schistosoma mansoni   11 9
No Yes Mnemiopsis leidyi Sea walnut 13 12
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   80 58
No Yes Nematostella vectensis 1.0 Starlet sea anemone 71 44
No Yes Hydra vulgaris   47 36
No Yes Amphimedon queenslandica   442 246
No Yes Trichoplax adhaerens   13 9
No Yes Proterospongia sp. ATCC 50818   7 7
No Yes Monosiga brevicollis   12 10
No Yes Sphaeroforma arctica JP610   8 5
No Yes Capsaspora owczarzaki ATCC 30864   4 3
No Yes Conidiobolus coronatus NRRL28638 v1.0   3 3
No Yes Mortierella verticillata NRRL 6337   7 6
No Yes Phycomyces blakesleeanus   11 11
No Yes Rhizopus oryzae RA 99-880   5 5
No Yes Mucor circinelloides   6 5
No Yes Rhizomucor miehei CAU432   5 5
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   3 3
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   4 4
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   5 4
No Yes Microbotryum violaceum 22   2 2
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   4 4
No Yes Piloderma croceum F 1598 v1.0   3 3
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   4 3
No Yes Hydnomerulius pinastri v2.0   5 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 3
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   4 3
No Yes Coprinopsis cinerea okayama7 130 v3   4 4
No Yes Pleurotus ostreatus Oyster mushroom 4 3
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 3 3
No Yes Galerina marginata v1.0   5 5
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   3 3
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 3
No Yes Heterobasidion annosum   3 3
No Yes Gloeophyllum trabeumv1.0   5 5
No Yes Punctularia strigosozonata v1.0   4 3
No Yes Sebacina vermifera MAFF 305830 v1.0   7 6
No Yes Fomitiporia mediterranea v1.0   4 3
No Yes Tulasnella calospora AL13/4D v1.0   4 3
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   3 3
No Yes Fomitopsis pinicolav1.0   4 4
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   4 4
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   3 3
No Yes Trametes versicolor v1.0   3 3
No Yes Tremella mesenterica Witches' butter 4 3
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   2 2
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   2 2
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   3 2
No Yes Neurospora crassa OR74A   2 2
No Yes Cryphonectria parasitica Chestnut blight fungus 3 2
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   3 2
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 2
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   3 3
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 3
No Yes Paracoccidioides brasiliensis Pb18   5 4
No Yes Coccidioides posadasii RMSCC 3488   3 3
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   4 4
No Yes Histoplasma capsulatum class NAmI strain WU24   4 4
No Yes Microsporum canis CBS 113480   4 4
No Yes Trichophyton equinum CBS 127.97   5 4
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   5 4
No Yes Trichophyton rubrum CBS 118892   4 4
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   4 3
No Yes Penicillium chrysogenum Wisconsin 54-1255   4 3
No Yes Penicillium chrysogenum v1.0   4 3
No Yes Aspergillus acidus v1.0   4 3
No Yes Aspergillus fumigatus Af293   4 3
No Yes Aspergillus brasiliensis v1.0   4 3
No Yes Aspergillus nidulans FGSC A4   4 3
No Yes Aspergillus sydowii v1.0   4 3
No Yes Aspergillus versicolor v1.0   4 3
No Yes Aspergillus glaucus   4 3
No Yes Aspergillus carbonarius ITEM 5010   4 3
No Yes Neosartorya fischeri NRRL 181   6 4
No Yes Aspergillus terreus NIH2624   4 3
No Yes Aspergillus tubingensis v1.0   4 3
No Yes Aspergillus wentii v1.0   4 3
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   5 3
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 3
No Yes Aspergillus clavatus NRRL 1   4 3
No Yes Penicillium marneffei ATCC 18224   4 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   3 2
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   3 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   2 2
No Yes Candida dubliniensis CD36   2 2
No Yes Candida tropicalis MYA-3404   2 2
No Yes Candida parapsilosis   2 2
No Yes Candida albicans SC5314   2 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   2 2
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   2 2
No Yes Debaromyces hansenii   2 2
No Yes Wickerhamomyces anomalus   1 1
No Yes Pichia pastoris GS115   3 2
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   1 1
No Yes Yarrowia lipolytica CLIB122   3 2
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Lachancea kluyveri   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Ashbya gossypii ATCC 10895   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   2 2
No Yes Schizosaccharomyces octosporus yFS286   2 2
No Yes Schizosaccharomyces japonicus yFS275   2 2
No Yes Schizosaccharomyces pombe Fission yeast 2 2
No Yes Catenaria anguillulae PL171 v1.0   5 5
No Yes Allomyces macrogynus ATCC 38327   10 10
No Yes Spizellomyces punctatus DAOM BR117   8 6
No Yes Dictyostelium discoideum   74 40
No Yes Dictyostelium purpureum   103 50
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   36 29
No Yes Pinus taeda Loblolly pine 30 23
No Yes Picea abies Norway spruce 20 15
No Yes Eucalyptus grandis v201 Rose gum 135 92
No Yes Theobroma cacao B97-61/B2 v1 Cacao 46 33
No Yes Gossypium raimondii v221   170 143
No Yes Citrus clementina v165   125 86
No Yes Citrus sinensis v154 Sweet orange 100 80
No Yes Thellungiella halophila v173   148 115
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 175 132
No Yes Capsella rubella v183   135 111
No Yes Arabidopsis lyrata Lyrate rockcress 173 129
No Yes Arabidopsis thaliana 10 Thale cress 166 119
No Yes Carica papaya Papaya 43 29
No Yes Medicago truncatula Barrel medic 87 78
No Yes Phaseolus vulgaris v186 French bean 53 47
No Yes Glycine max v109 Soybean 91 81
No Yes Cucumis sativus v122 Cucumber 44 37
No Yes Fragaria vesca Wild strawberry 80 51
No Yes Malus domestica v196 Apple 153 113
No Yes Prunus persica v139 Peach 62 48
No Yes Linum usitatissimum v200 Flax 50 43
No Yes Manihot esculenta v147 Cassava 64 54
No Yes Populus trichocarpa v156 Black cottonwood 92 63
No Yes Vitis vinifera Wine grape 43 31
No Yes Mimulus guttatus v140 Spotted monkey flower 280 175
No Yes Solanum lycopersicum v.2.3 Tomato 43 39
No Yes Solanum tuberosum Potato 82 66
No Yes Actinidia chinensis Hongyang   52 43
No Yes Aquilegia coerulea v195   97 76
No Yes Triticum urartu 22   171 155
No Yes Triticum aestivum 22 Bread wheat 201 180
No Yes Aegilops tauschii 22   375 353
No Yes Brachypodium distachyon Stiff brome 132 124
No Yes Oryza barthii 22 African wild rice 187 122
No Yes Oryza meridionalis 22   168 121
No Yes Oryza glumaepatula 22   192 141
No Yes Oryza glaberrima African rice 124 123
No Yes Oryza punctata 22   154 115
No Yes Oryza nivara 22   180 136
No Yes Oryza brachyantha 22 Malo sina 76 70
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 171 165
No Yes Oryza sativa v193 Rice 170 164
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 56 48
No Yes Panicum virgatum v202 Switchgrass 399 382
No Yes Setaria italica v164 Foxtail millet 166 156
No Yes Zea mays subsp. mays Maize 122 109
No Yes Zea mays v181 Maize 124 111
No Yes Sorghum bicolor Sorghum 186 175
No Yes Musa balbisiana Balbis banana 43 35
No Yes Musa acuminata 22 Wild Malaysian banana 36 33
No Yes Amborella trichopoda 22   22 19
No Yes Physcomitrella patens   21 17
No Yes Coccomyxa subellipsoidea sp. C-169 v2   7 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   9 6
No Yes Chlorella variabilis sp. NC64A   5 5
No Yes Chlorella vulgaris   7 4
No Yes Volvox carteri f. nagariensis   6 5
No Yes Volvox carteri v199   5 5
No Yes Chlamydomonas reinhardtii 4.0   9 9
No Yes Ostreococcus sp. RCC809   8 7
No Yes Ostreococcus lucimarinus CCE9901   8 7
No Yes Ostreococcus tauri   8 5
No Yes Bathycoccus prasinos   2 2
No Yes Micromonas sp. RCC299   11 8
No Yes Micromonas pusilla CCMP1545 v3.0   15 10
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   7 7
No Yes Bigelowiella natans CCMP2755 22   12 12
No Yes Giardia lamblia 2.3   1 1
No Yes Cyanophora paradoxa   43 36
No Yes Leishmania mexicana 2.4   6 4
No Yes Leishmania major strain Friedlin   6 4
No Yes Leishmania infantum JPCM5 2.4   5 4
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   7 6
No Yes Trypanosoma vivax   4 4
No Yes Trypanosoma cruzi strain CL Brener   2 2
No Yes Trypanosoma congolense 2.4   2 2
No Yes Trypanosoma brucei gambiense v4.1   5 5
No Yes Trypanosoma brucei TREU927 v4.1   5 5
No Yes Ectocarpus siliculosus   13 7
No Yes Aureococcus anophagefferens   9 8
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   7 5
No Yes Pythium arrhenomanes ATCC 12531 22   8 6
No Yes Pythium ultimum v1.7-2   9 5
No Yes Pythium aphanidermatum DAOM BR444 22   11 7
No Yes Pythium irregulare DAOM BR486 22   8 6
No Yes Pythium vexans DAOM BR484 22   7 5
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 7 5
No Yes Phytophthora sojae 1.1   6 5
No Yes Phytophthora infestans T30-4   13 8
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   24 24
No Yes Thalassiosira pseudonana CCMP1335   5 5
No Yes Perkinsus marinus ATCC 50983   6 4
No Yes Paramecium tetraurelia   33 28
No Yes Tetrahymena thermophila SB210 1   27 23
No Yes Ichthyophthirius multifiliis strain G5   3 3
No Yes Cryptosporidium hominis   2 2
No Yes Cryptosporidium muris   3 3
No Yes Cryptosporidium parvum Iowa II   3 3
No Yes Neospora caninum   5 4
No Yes Toxoplasma gondii VEG   4 4
No Yes Toxoplasma gondii ME49   5 5
No Yes Toxoplasma gondii GT1   4 4
No Yes Babesia bovis T2Bo   6 6
No Yes Theileria parva   3 3
No Yes Theileria annulata   3 3
No Yes Plasmodium falciparum 3D7   4 4
No Yes Plasmodium vivax SaI-1 7.0   4 4
No Yes Plasmodium knowlesi strain H   4 4
No Yes Plasmodium yoelii ssp. yoelii 1   4 4
No Yes Plasmodium chabaudi   4 4
No Yes Plasmodium berghei ANKA   4 4
No Yes Symbiodinium minutum clade B1 v1.2   40 37
No Yes Naegleria gruberi   8 7
No Yes Trichomonas vaginalis   4 4
No Yes Guillardia theta CCMP2712 v1.0   12 10
No Yes Emiliania huxleyi CCMP1516   43 42
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 59 40
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 30 20
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 22 16
No Yes Ascaris suum Victoria/Ghent Pig roundworm 18 18
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 185 100
No Yes Cryptococcus neoformans var. grubii H99   3 3
No Yes Cryptococcus neoformans B-3501A   4 3
No Yes Cryptococcus neoformans JEC21   3 2
No Yes Paracoccidioides brasiliensis Pb01   5 4
No Yes Paracoccidioides brasiliensis Pb03   4 3
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   3 3
No Yes Coccidioides immitis H538.4   3 3
No Yes Ajellomyces dermatitidis ER-3   4 4
No Yes Histoplasma capsulatum H143   5 4
No Yes Histoplasma capsulatum H88   4 4
No Yes Histoplasma capsulatum G186AR   4 4
No Yes Aspergillus fumigatus A1163   4 3
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   2 2
No Yes Batrachochytrium dendrobatidis JEL423   7 6
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 46 32
No Yes Hordeum vulgare 22 Domesticated barley 168 152
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 202 188
No Yes Trypanosoma brucei Lister 427 v4.1   5 5
No Yes Neospora caninum Nc-Liverpool 6.2   5 4
No Yes Plasmodium falciparum HB3   4 4
No Yes Plasmodium falciparum Dd2   4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 112 88
No Yes Homo sapiens (NCBI version) Human 60 41
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 48 37
No Yes Heliconius numata (Incomplete)   6 6
No Yes Loa loa v3.3 (Request) Eye worm 14 14
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 9 9
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 10 10
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   34 31
No Yes Malus x domestica (Duplicate) Apple 154 114
No Yes Ricinus communis (Early assembly) Castor bean 26 22
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   77 63
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 43 39
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 43 39
No Yes Phoenix dactylifera (Early draft) Date palm 23 21
No Yes Homo sapiens 69_37 Human 32 23
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 31 22
No Yes Gorilla gorilla 69_3.1 Western gorilla 32 24
No Yes Pongo abelii 69_2 Sumatran orangutan 32 22
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 32 22
No Yes Macaca mulatta 69_1 Rhesus monkey 35 25
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 33 24
No Yes Otolemur garnettii 69_3 Small-eared galago 41 32
No Yes Microcebus murinus 69_1 Gray mouse lemur 21 15
No Yes Rattus norvegicus 69_3.4 Norway rat 33 24
No Yes Mus musculus 69_38 House mouse 48 37
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 32 21
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 32 22
No Yes Cavia porcellus 69_3 Domestic guinea pig 51 40
No Yes Oryctolagus cuniculus 69_2 Rabbit 24 17
No Yes Ochotona princeps 69 American pika 25 17
No Yes Tupaia belangeri 69 Northern tree shrew 19 15
No Yes Sus scrofa 69_10.2 Pig 41 26
No Yes Bos taurus 69_3.1 Cattle 33 23
No Yes Vicugna pacos 69_1 Alpaca 18 13
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 31 21
No Yes Mustela putorius furo 69_1.0 Domestic ferret 33 23
No Yes Ailuropoda melanoleuca 69_1 Giant panda 33 22
No Yes Canis familiaris 69_3.1 Dog 30 21
No Yes Felis catus 69 Domestic cat 24 18
No Yes Equus caballus 69_2 Horse 28 21
No Yes Myotis lucifugus 69_2.0 Little brown bat 37 27
No Yes Pteropus vampyrus 69_1 Large flying fox 29 21
No Yes Sorex araneus 69_1 European shrew 21 15
No Yes Erinaceus europaeus 69 Western European hedgehog 26 20
No Yes Procavia capensis 69_1 Cape rock hyrax 26 20
No Yes Loxodonta africana 69_3 African savanna elephant 32 21
No Yes Echinops telfairi 69 Small Madagascar hedgehog 23 17
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 17 13
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 17 11
No Yes Macropus eugenii 69_1.0 Tammar wallaby 20 15
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 31 22
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 29 19
No Yes Ornithorhynchus anatinus 69_5 Platypus 24 16
No Yes Petromyzon marinus 69_7.0 Sea lamprey 19 13
No Yes Meleagris gallopavo 69_2 Turkey 29 20
No Yes Gallus gallus 69_2 Chicken 28 20
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 25 17
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 30 22
No Yes Anolis carolinensis 69_2.0 Green anole 27 21
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 30 21
No Yes Latimeria chalumnae 69_1 Coelacanth 41 27
No Yes Gadus morhua 69_1 Atlantic cod 31 25
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 37 28
No Yes Takifugu rubripes 69_4 Torafugu 35 24
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 39 29
No Yes Oryzias latipes 69_1 Japanese medaka 36 25
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 35 25
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 44 32
No Yes Danio rerio 69_9 Zebrafish 53 32
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 22 18
No Yes Ciona intestinalis 69 Vase tunicate 21 16
No Yes Drosophila melanogaster 69_5 Fruit fly 15 11
No Yes Caenorhabditis elegans 69_215 Roundworm 161 87
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 132 92
No Yes Endophytic microbiome from Rice (meta-genome)   5 5
No Yes NCBI 2017_08 genome   32940 24133
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   112 106
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3319 2599
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   32646 26213
No Yes Global Ocean Sampling Expedition (GOS)   42 34
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   14 14
No Yes Protein Data Bank (all PDB sequenc)   160 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   424 424
No Yes TargetDB (Targets)   192 143
No Yes UniProt viral sequences (Viral)   3 3

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