SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


EGF/Laminin superfamily domain assignments
in
Drosophila melanogaster 69_5

Assignment details

(show help)


Drosophila melanogaster 69_5 has 218 significant domains in 50 proteins.

     

Sequence ID   Evalue   Region   Family  
FBpp0070483   0.00000000000514   1183-1225   EGF-type module  
  0.00000000000786   526-568   EGF-type module  
  0.00000000013   829-872   EGF-type module  
  0.000000000161   488-530   EGF-type module  
  0.00000000286   1061-1098   EGF-type module  
  0.00000000411   449-487   EGF-type module  
  0.0000000189   1416-1453   EGF-type module  
  0.0000000248   180-216   EGF-type module  
  0.0000000893   1024-1065   EGF-type module  
  0.000000113   331-370   EGF-type module  
  0.000000121   1099-1141   EGF-type module  
  0.00000014   1338-1375   EGF-type module  
  0.000000339   143-177   EGF-type module  
  0.00000113   411-453   EGF-type module  
  0.00000196   372-410   EGF-type module  
  0.0000214   1153-1187   EGF-type module  
  0.0000538   97-140   EGF-type module  
  0.0000544   61-96   EGF-type module  
  0.000147   1377-1415   EGF-type module  
  0.0323   570-598   EGF-type module  
FBpp0071061   0.00000000837   600-640   Integrin beta EGF-like domains  
  0.00103   646-688   Integrin beta EGF-like domains  
  0.0218   521-547   Integrin beta EGF-like domains  
FBpp0072590   0.000000111   401-433   EGF-type module  
  0.00000225   437-483   EGF-type module  
  0.000939   371-400   EGF-type module  
FBpp0073147   0.000000000346   362-403   EGF-type module  
  0.0000137   332-368   EGF-type module  
FBpp0073256   0.000000095   276-321   EGF-type module  
  0.0152   184-208   EGF-type module  
  0.028   243-282   EGF-type module  
FBpp0073714   0.0000000013   346-390   EGF-type module  
  0.00000000171   1385-1424   EGF-type module  
  0.00000000762   1411-1457   EGF-type module  
  0.00000724   309-354   EGF-type module  
  0.000225   665-706   EGF-type module  
  0.000991   985-1041   EGF-type module  
FBpp0073757   0.00000000215   445-500   Laminin-type module  
  0.00000000306   498-555   Laminin-type module  
  0.0000000642   561-602   Laminin-type module  
FBpp0073759   0.000000000502   313-371   Laminin-type module  
  0.00000000259   369-425   Laminin-type module  
  0.00000019   432-472   Laminin-type module  
FBpp0074675   0.000000408   4237-4279   EGF-type module  
  0.00000212   4131-4168   EGF-type module  
  0.00000907   4167-4206   EGF-type module  
  0.0000305   4209-4247   EGF-type module  
  0.0000434   3882-3925   EGF-type module  
FBpp0074961   0.00000000503   67-112   EGF-type module  
FBpp0075495   0.00000474   196-242   EGF-type module  
  0.00067   292-337   EGF-type module  
FBpp0076111   0.0000000000363   847-893   Laminin-type module  
  0.000000000335   956-1006   Laminin-type module  
  0.00000000162   744-795   Laminin-type module  
  0.00000000201   299-361   EGF-type module  
  0.0000000053   461-511   Laminin-type module  
  0.0000000614   902-953   Laminin-type module  
  0.00000215   414-461   Laminin-type module  
  0.0000105   799-849   Laminin-type module  
  0.0000209   359-406   Laminin-type module  
  0.000198   1004-1050   Laminin-type module  
  0.000271   706-746   EGF-type module  
FBpp0076517   0.000000000067   158-207   EGF-type module  
  0.00000724   124-166   EGF-type module  
FBpp0076722   0.000000000725   1917-1971   Laminin-type module  
  0.00000000112   541-589   Laminin-type module  
  0.00000000307   1867-1919   EGF-type module  
  0.00000000502   1466-1516   Laminin-type module  
  0.0000000502   1809-1861   Laminin-type module  
  0.00000012   495-543   Laminin-type module  
  0.000000363   1375-1423   Laminin-type module  
  0.00000053   732-782   Laminin-type module  
  0.000000697   632-679   Laminin-type module  
  0.00000106   1514-1562   Laminin-type module  
  0.00000137   333-390   Laminin-type module  
  0.00000279   1427-1463   Laminin-type module  
  0.00000335   273-330   Laminin-type module  
  0.00000418   1970-2019   Laminin-type module  
  0.0000128   448-497   Laminin-type module  
  0.0000206   2017-2066   Laminin-type module  
  0.0000307   403-450   Laminin-type module  
  0.0000335   677-729   Laminin-type module  
  0.0000469   785-823   Laminin-type module  
  0.000112   1774-1811   Laminin-type module  
  0.000123   587-634   Laminin-type module  
  0.00128   2064-2111   Laminin-type module  
FBpp0076790   0.00000000174   565-602   EGF-type module  
FBpp0077167   0.000000147   4054-4091   EGF-type module  
  0.000105   4014-4052   EGF-type module  
  0.028   3993-4017   EGF-type module  
FBpp0078942   0.0000000233   470-517   EGF-type module  
  0.000345   530-564   EGF-type module  
  0.0942   343-396   EGF-type module  
FBpp0079113   0.0000000000949   837-885   Laminin-type module  
  0.000000000725   1043-1091   Laminin-type module  
  0.000000000753   991-1038   Laminin-type module  
  0.00000000103   1094-1144   Laminin-type module  
  0.00000000109   883-935   Laminin-type module  
  0.0000000117   355-420   Laminin-type module  
  0.0000000232   789-830   Laminin-type module  
  0.0000000781   529-567   Laminin-type module  
  0.00000018   288-357   Laminin-type module  
  0.00000187   442-480   Laminin-type module  
  0.00000193   945-993   Laminin-type module  
  0.00000335   1142-1189   Laminin-type module  
  0.0000159   478-520   Laminin-type module  
FBpp0079163   0.0000000167   1311-1359   Laminin-type module  
  0.00000131   1188-1223   EGF-type module  
  0.00000188   2305-2354   Laminin-type module  
  0.0000314   2358-2431   Laminin-type module  
  0.000167   1264-1311   Laminin-type module  
FBpp0079313   0.0000000671   182-228   EGF-type module  
FBpp0080808   0.0000000454   82-132   EGF-type module  
FBpp0080990   0.00000145   589-626   Integrin beta EGF-like domains  
  0.00000391   527-555   Integrin beta EGF-like domains  
  0.00307   473-500   Integrin beta EGF-like domains  
FBpp0083153   0.0000000176   332-384   EGF-type module  
  0.000000274   291-335   EGF-type module  
  0.0000193   377-419   EGF-type module  
FBpp0084068   0.00000000000628   1112-1155   EGF-type module  
  0.000000000016   950-995   EGF-type module  
FBpp0084070   0.00000000000243   587-632   EGF-type module  
  0.0000000000234   751-795   EGF-type module  
FBpp0084498   0.0000000000787   490-533   EGF-type module  
  0.000000000286   916-956   EGF-type module  
  0.000000000953   798-835   EGF-type module  
  0.00000000245   879-921   EGF-type module  
  0.00000131   687-723   EGF-type module  
  0.00000794   838-882   EGF-type module  
  0.0000191   351-394   EGF-type module  
  0.000254   472-494   EGF-type module  
  0.00461   767-802   EGF-type module  
FBpp0086437   0.0000000000743   1088-1134   EGF-type module  
  0.0000000172   928-970   EGF-type module  
  0.0000419   1376-1417   EGF-type module  
FBpp0086821   0.0000000046   664-708   EGF-type module  
  0.00000000958   968-1019   EGF-type module  
  0.000331   357-398   EGF-type module  
  0.0542   1271-1326   EGF-type module  
FBpp0087309   0.000000000258   1482-1522   EGF-type module  
  0.00000226   2095-2135   Laminin-type module  
  0.0958   1970-2000   EGF-type module  
FBpp0087438   0.000000349   588-630   EGF-type module  
  0.0000454   549-603   EGF-type module  
FBpp0087868   0.00000838   4400-4442   EGF-type module  
  0.0000256   4365-4398   EGF-type module  
  0.000039   4327-4363   EGF-type module  
  0.000264   4453-4491   EGF-type module  
  0.000363   2212-2260   EGF-type module  
  0.000493   4249-4295   EGF-type module  
  0.000559   4293-4329   EGF-type module  
  0.00197   4496-4530   EGF-type module  
  0.00524   3845-3881   EGF-type module  
  0.00931   2529-2577   EGF-type module  
  0.0141   1893-1945   EGF-type module  
  0.0898   4213-4247   EGF-type module  
FBpp0088036   0.00000839   968-1003   EGF-type module  
  0.000558   1015-1054   EGF-type module  
FBpp0088211   0.0000000114   189-240   EGF-type module  
  0.000167   247-300   EGF-type module  
  0.0035   424-448   EGF-type module  
FBpp0088727   0.00000000822   935-975   EGF-type module  
  0.00000015   736-779   EGF-type module  
  0.00000339   889-929   EGF-type module  
  0.000477   697-736   EGF-type module  
FBpp0112919   0.000000000000962   209-251   EGF-type module  
  0.0000000000143   289-327   EGF-type module  
  0.000000000711   171-213   EGF-type module  
  0.00000121   329-371   EGF-type module  
  0.00000341   249-293   EGF-type module  
  0.00000471   136-176   EGF-type module  
  0.00000571   1254-1302   EGF-type module  
  0.0000126   1536-1577   EGF-type module  
  0.000016   365-403   EGF-type module  
  0.0297   1867-1903   EGF-type module  
FBpp0271945   0.000000000117   154-197   EGF-type module  
  0.0000000665   467-505   EGF-type module  
  0.00000172   205-239   EGF-type module  
  0.0000042   427-464   EGF-type module  
  0.0362   383-415   EGF-type module  
FBpp0288445   0.000000163   129-175   EGF-type module  
  0.000000202   2389-2433   EGF-type module  
  0.000000567   2221-2259   EGF-type module  
  0.00000077   454-508   EGF-type module  
  0.00000315   408-448   EGF-type module  
  0.00000568   1429-1467   EGF-type module  
  0.0000149   826-868   EGF-type module  
  0.0000734   910-951   EGF-type module  
  0.0000778   1017-1064   EGF-type module  
  0.0000891   2746-2790   EGF-type module  
  0.000134   1141-1183   EGF-type module  
  0.000921   17702-17735   EGF-type module  
  0.0017   11087-11120   EGF-type module  
  0.00252   18454-18488   EGF-type module  
  0.00262   9795-9829   EGF-type module  
  0.00284   17914-17948   EGF-type module  
  0.00288   17064-17096   EGF-type module  
  0.00325   17810-17843   Merozoite surface protein 1 (MSP-1)  
  0.00379   12049-12081   EGF-type module  
  0.00568   19799-19832   EGF-type module  
  0.00656   9586-9619   EGF-type module  
  0.00948   984-1028   EGF-type module  
  0.0128   8770-8806   EGF-type module  
  0.0149   20440-20473   EGF-type module  
  0.0154   17383-17415   EGF-type module  
  0.0162   20120-20153   EGF-type module  
  0.0187   10978-11012   EGF-type module  
  0.0197   17170-17203   EGF-type module  
  0.024   11510-11543   EGF-type module  
  0.0251   19570-19604   EGF-type module  
  0.0271   790-838   EGF-type module  
  0.0288   20763-20795   EGF-type module  
  0.033   18577-18609   EGF-type module  
  0.0367   11404-11436   EGF-type module  
  0.0405   14702-14735   EGF-type module  
  0.0447   20015-20045   EGF-type module  
  0.0449   9051-9084   EGF-type module  
  0.0524   13593-13625   EGF-type module  
  0.0539   10010-10043   EGF-type module  
  0.0549   13854-13886   EGF-like domain of nidogen-1  
  0.055   12576-12609   EGF-type module  
  0.0569   12151-12183   EGF-type module  
  0.0595   8902-8935   EGF-type module  
  0.0689   15254-15287   EGF-type module  
  0.0692   12786-12821   EGF-type module  
  0.0709   20656-20684   EGF-type module  
  0.074   18682-18715   EGF-type module  
  0.0837   876-924   EGF-type module  
  0.0954   11194-11227   EGF-type module  
  0.0978   13429-13460   EGF-type module  
FBpp0288716   0.000000000000383   738-786   EGF-type module  
  0.00000000000218   779-827   EGF-type module  
  0.0000000494   547-583   EGF-type module  
  0.00000661   467-507   EGF-type module  
  0.000242   248-298   EGF-type module  
  0.00739   982-1008   EGF-type module  
  0.0225   521-557   EGF-type module  
FBpp0288820   0.0000000000838   155-197   EGF-type module  
  0.0000000122   461-503   EGF-type module  
  0.000000275   290-337   EGF-type module  
  0.00000032   192-234   EGF-type module  
  0.000000876   425-459   EGF-type module  
  0.0134   322-374   EGF-type module  
  0.0237   247-273   EGF-type module  
FBpp0289136   0.0000516   1033-1058   EGF-type module  
  0.000767   1104-1127   Integrin beta EGF-like domains  
  0.000977   1003-1027   Integrin beta EGF-like domains  
  0.00237   1134-1159   Integrin beta EGF-like domains  
  0.014   1162-1198   EGF-type module  
  0.0293   938-962   EGF-type module  
  0.0558   967-994   Integrin beta EGF-like domains  
FBpp0290604   0.00000276   949-996   Laminin-type module  
  0.000418   224-250   Integrin beta EGF-like domains  
FBpp0290880   0.000000194   1182-1222   EGF-type module  
  0.000106   1797-1834   EGF-type module  
  0.000167   1488-1531   EGF-type module  
FBpp0291364   0.00000000718   4126-4183   EGF-type module  
  0.0000632   4541-4573   EGF-type module  
  0.00259   2782-2841   EGF-type module  
  0.009   4487-4512   EGF-type module  
  0.0137   1823-1859   EGF-type module  
  0.0274   2459-2518   EGF-type module  
FBpp0291372   0.000000000347   2059-2096   EGF-type module  
  0.00000000102   2174-2217   EGF-type module  
  0.00000000281   2368-2411   EGF-type module  
  0.0000000801   982-1019   EGF-type module  
  0.000000766   2329-2374   EGF-type module  
  0.000000949   2413-2445   EGF-type module  
  0.00000132   2024-2065   EGF-type module  
  0.00000182   786-826   EGF-type module  
  0.00000354   2449-2485   EGF-type module  
  0.00000783   2146-2182   EGF-type module  
  0.0000398   2097-2141   EGF-type module  
  0.000683   3404-3443   EGF-type module  
  0.00709   3372-3409   EGF-type module  
FBpp0291871   0.0000000103   1065-1108   Laminin-type module  
  0.0000000234   852-904   Laminin-type module  
  0.0000000234   1150-1196   Laminin-type module  
  0.0000000257   1294-1342   Laminin-type module  
  0.0000000363   401-454   EGF-type module  
  0.000000131   1670-1719   Laminin-type module  
  0.000000215   1199-1247   Laminin-type module  
  0.000000335   935-976   Laminin-type module  
  0.00000151   1726-1775   Laminin-type module  
  0.00000234   1018-1059   Laminin-type module  
  0.0000112   974-1013   Laminin-type module  
  0.0000257   452-494   Laminin-type module  
  0.000103   562-602   Laminin-type module  
  0.000753   1773-1814   Laminin-type module  
  0.00446   516-552   Laminin-type module  
  0.00446   1247-1291   Laminin-type module  
  0.00893   1340-1392   Laminin-type module  
  0.0212   810-843   EGF-type module  
FBpp0292843   0.0000000695   1498-1537   EGF-type module  
  0.000000726   1459-1515   EGF-type module  
FBpp0292927   0.00000000689   257-305   EGF-type module  
  0.00107   214-254   EGF-type module  
FBpp0293268   0.0000000000159   907-949   EGF-type module  
  0.0000000000161   792-834   EGF-type module  
  0.000000000456   1939-1976   EGF-type module  
  0.000000000712   425-462   EGF-type module  
  0.00000000109   830-872   EGF-type module  
  0.00000000126   1900-1943   EGF-type module  
  0.00000000138   1009-1052   EGF-type module  
  0.00000000168   2057-2101   EGF-type module  
  0.00000000383   868-911   EGF-type module  
  0.00000000542   386-430   EGF-type module  
  0.0000000201   602-642   EGF-type module  
  0.000000021   349-391   EGF-type module  
  0.0000000581   715-762   EGF-type module  
  0.00000011   465-499   EGF-type module  
  0.000000114   753-789   EGF-type module  
  0.000000165   305-345   EGF-type module  
  0.000000177   1980-2024   EGF-type module  
  0.000000456   267-303   EGF-type module  
  0.000000493   1867-1906   EGF-type module  
  0.00000168   2020-2061   EGF-type module  
  0.00000839   2096-2134   EGF-type module  
  0.0000153   2136-2178   EGF-type module  
  0.0000274   1047-1087   EGF-type module  
  0.0000788   654-687   EGF-type module  
  0.000914   989-1013   EGF-type module  
  0.0148   945-965   EGF-type module  
FBpp0300570   0.00000749   3823-3861   EGF-type module  
FBpp0300810   0.000000149   4087-4129   EGF-type module  
  0.00000126   2344-2393   Laminin-type module  
  0.00000297   2001-2049   Laminin-type module  
  0.0000101   2307-2346   EGF-type module  
  0.000921   2654-2691   EGF-type module  
  0.00117   1937-1965   EGF-type module  
  0.0195   2061-2103   Laminin-type module  
  0.0209   2426-2463   Laminin-type module  
 
Weak hits:
FBpp0070005   0.00469   329-365   EGF-type module  
  0.0285   65-97   EGF-type module  
FBpp0070939   0.000161   348-378   EGF-type module  
  0.00122   382-409   EGF-type module  
  0.003   315-344   EGF-type module  
  0.00322   418-445   EGF-type module  
  0.0126   281-315   EGF-type module  
FBpp0072680   0.0156   402-451   Laminin-type module  
  0.0352   535-582   Laminin-type module  
  0.0921   668-713   Laminin-type module  
FBpp0075424   0.0251   684-711   Cripto EGF-like domain-like  
FBpp0077310   0.000858   46-75   EGF-type module  
FBpp0080068   0.0739   156-173   EGF-type module  
FBpp0084180   0.000373   741-783   EGF-type module  
FBpp0086264   0.0698   1055-1089   EGF-type module  
FBpp0086351   0.000239   51-87   EGF-type module  
FBpp0297244   0.000698   1171-1195   EGF-type module  
  0.00167   1140-1163   EGF-type module  
  0.00279   1104-1130   Integrin beta EGF-like domains  
  0.0105   1270-1296   Integrin beta EGF-like domains  
  0.0153   1075-1099   Integrin beta EGF-like domains  
  0.0656   1240-1265   Integrin beta EGF-like domains  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a EGF/Laminin domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]