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LDL receptor-like module superfamily domain assignments
in
Heterocephalus glaber v1.7-2

Assignment details

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Heterocephalus glaber v1.7-2 has 238 significant domains in 49 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000239367   0.0000000107   170-206   LDL receptor-like module  
HGL_H00000252444   0.00000000000707   102-142   LDL receptor-like module  
  0.0000000000393   141-182   LDL receptor-like module  
  0.000000000144   25-62   LDL receptor-like module  
  0.00000000017   274-311   LDL receptor-like module  
  0.000000000196   211-247   LDL receptor-like module  
  0.000000000445   312-351   LDL receptor-like module  
  0.000000000668   61-104   LDL receptor-like module  
HGL_H00000253193   0.0000000000484   454-491   LDL receptor-like module  
  0.000000000126   164-201   LDL receptor-like module  
  0.00000000113   210-249   LDL receptor-like module  
  0.00000249   415-452   LDL receptor-like module  
  0.00301   387-414   LDL receptor-like module  
HGL_H00000256991   0.000000000034   298-338   LDL receptor-like module  
  0.000000000113   343-379   LDL receptor-like module  
  0.000000000157   262-300   LDL receptor-like module  
  0.000000000367   177-217   LDL receptor-like module  
  0.000000000419   100-139   LDL receptor-like module  
  0.00000000524   138-176   LDL receptor-like module  
  0.00000000628   221-259   LDL receptor-like module  
  0.00000157   60-102   LDL receptor-like module  
HGL_H00000260197   0.0000000000128   1417-1455   LDL receptor-like module  
  0.0000000000563   1196-1234   LDL receptor-like module  
  0.0000000000929   1324-1361   LDL receptor-like module  
  0.000000000223   1153-1194   LDL receptor-like module  
  0.00000000236   1076-1114   LDL receptor-like module  
  0.00000000327   1239-1272   LDL receptor-like module  
  0.00000000641   1370-1404   LDL receptor-like module  
  0.0000000144   1471-1508   LDL receptor-like module  
  0.0000000406   1514-1551   LDL receptor-like module  
  0.000000183   1121-1154   LDL receptor-like module  
  0.00000236   1276-1311   LDL receptor-like module  
HGL_H00000261349   0.0000000013   1252-1292   LDL receptor-like module  
  0.00000000155   1331-1369   LDL receptor-like module  
  0.00000000393   1293-1329   LDL receptor-like module  
HGL_H00000263196   0.000000000017   3-42   LDL receptor-like module  
HGL_H00000263408   0.00000844   81-112   LDL receptor-like module  
HGL_H00000263413   0.0000000223   132-166   LDL receptor-like module  
HGL_H00000263816   0.0000000000223   1241-1282   LDL receptor-like module  
  0.0000000000327   39-79   LDL receptor-like module  
  0.0000000000511   2711-2753   LDL receptor-like module  
  0.0000000000668   3605-3644   LDL receptor-like module  
  0.0000000000759   4-41   LDL receptor-like module  
  0.000000000223   1123-1160   LDL receptor-like module  
  0.000000000353   3696-3733   LDL receptor-like module  
  0.000000000511   3048-3087   LDL receptor-like module  
  0.000000000576   997-1035   LDL receptor-like module  
  0.000000000668   1082-1119   LDL receptor-like module  
  0.00000000072   2880-2917   LDL receptor-like module  
  0.000000000733   3488-3523   LDL receptor-like module  
  0.000000000746   78-119   LDL receptor-like module  
  0.000000000772   3775-3812   LDL receptor-like module  
  0.00000000111   2963-3005   LDL receptor-like module  
  0.00000000119   3564-3607   LDL receptor-like module  
  0.00000000144   3731-3771   LDL receptor-like module  
  0.0000000017   3009-3048   LDL receptor-like module  
  0.00000000249   3904-3940   LDL receptor-like module  
  0.00000000262   1041-1078   LDL receptor-like module  
  0.00000000301   2676-2713   LDL receptor-like module  
  0.00000000301   197-235   LDL receptor-like module  
  0.00000000458   158-194   LDL receptor-like module  
  0.00000000511   2834-2875   LDL receptor-like module  
  0.00000000995   1161-1199   LDL receptor-like module  
  0.0000000209   1205-1240   LDL receptor-like module  
  0.0000000223   2790-2836   LDL receptor-like module  
  0.0000000288   3525-3566   LDL receptor-like module  
  0.0000000353   239-275   LDL receptor-like module  
  0.0000000419   3818-3856   LDL receptor-like module  
  0.0000000812   3860-3898   LDL receptor-like module  
  0.0000000956   2919-2963   LDL receptor-like module  
  0.000000249   3659-3692   LDL receptor-like module  
  0.000000445   1286-1322   LDL receptor-like module  
  0.00000123   2757-2795   LDL receptor-like module  
  0.00000223   124-156   LDL receptor-like module  
HGL_H00000273857   0.00000000314   472-514   LDL receptor-like module  
  0.00000000563   124-162   LDL receptor-like module  
  0.00000000641   162-198   LDL receptor-like module  
  0.00000000825   435-470   LDL receptor-like module  
  0.0000000117   198-236   LDL receptor-like module  
  0.0000000458   239-270   LDL receptor-like module  
HGL_H00000276654   0.000000000012   433-471   LDL receptor-like module  
  0.00000000115   147-183   LDL receptor-like module  
  0.0000000903   394-432   LDL receptor-like module  
  0.00000013   195-237   LDL receptor-like module  
  0.00000055   357-394   LDL receptor-like module  
HGL_H00000278742   0.000000000275   488-525   LDL receptor-like module  
  0.000000000511   523-561   LDL receptor-like module  
  0.00000000196   452-488   LDL receptor-like module  
  0.00000224   564-604   LDL receptor-like module  
HGL_H00000284885   0.0000000000236   627-665   LDL receptor-like module  
  0.0000000969   167-209   LDL receptor-like module  
HGL_H00000294304   0.000000000694   1365-1401   LDL receptor-like module  
  0.00000000471   1327-1363   LDL receptor-like module  
  0.00000000589   1287-1325   LDL receptor-like module  
HGL_H00000298386   0.00000000209   10-49   LDL receptor-like module  
HGL_H00000301458-1   0.0000000000196   96-133   LDL receptor-like module  
  0.000000000114   175-215   LDL receptor-like module  
HGL_H00000301458-2   0.000000000733   242-284   LDL receptor-like module  
  0.00000000471   288-326   LDL receptor-like module  
  0.000000113   34-73   LDL receptor-like module  
  0.0000419   330-367   LDL receptor-like module  
HGL_H00000303634   0.000000000101   155-192   LDL receptor-like module  
  0.000000000236   3-46   LDL receptor-like module  
  0.000000000798   194-231   LDL receptor-like module  
  0.0000000115   37-82   LDL receptor-like module  
HGL_H00000306726   0.00000000942   316-352   LDL receptor-like module  
HGL_H00000318607   0.0000000000314   102-139   LDL receptor-like module  
  0.000000000445   35-77   LDL receptor-like module  
  0.0000000011   1-30   LDL receptor-like module  
HGL_H00000322061   0.0000153   220-261   LDL receptor-like module  
HGL_H00000342098-2   0.00000000301   304-342   LDL receptor-like module  
  0.0000000128   372-410   LDL receptor-like module  
HGL_H00000352601   0.0000000000327   440-477   LDL receptor-like module  
  0.000000000055   178-215   LDL receptor-like module  
  0.000055   371-395   LDL receptor-like module  
  0.00144   397-439   LDL receptor-like module  
HGL_H00000354458   0.000000196   178-210   LDL receptor-like module  
HGL_H00000354753   0.000000113   5-39   LDL receptor-like module  
HGL_H00000360281   0.000000089   122-154   LDL receptor-like module  
HGL_H00000360411   0.000000458   34-71   LDL receptor-like module  
  0.0000746   85-114   LDL receptor-like module  
  0.0000812   121-162   LDL receptor-like module  
HGL_H00000363827   0.000000000654   342-380   LDL receptor-like module  
  0.000000000694   387-431   LDL receptor-like module  
  0.0000000013   302-339   LDL receptor-like module  
  0.0000000314   214-253   LDL receptor-like module  
HGL_H00000366477   0.000000000707   734-774   LDL receptor-like module  
  0.0000000183   516-558   LDL receptor-like module  
  0.00000275   295-332   LDL receptor-like module  
HGL_H00000367255   0.00000000196   1742-1777   LDL receptor-like module  
  0.0000000131   958-994   LDL receptor-like module  
  0.000000038   1557-1594   LDL receptor-like module  
  0.0000000929   994-1029   LDL receptor-like module  
  0.00000209   927-953   LDL receptor-like module  
  0.000654   1044-1069   LDL receptor-like module  
HGL_H00000369762   0.000000106   87-125   LDL receptor-like module  
HGL_H00000371211   0.00000115   480-511   LDL receptor-like module  
  0.000013   516-552   LDL receptor-like module  
  0.0000249   445-478   LDL receptor-like module  
HGL_H00000371532   0.00000000000249   410-449   LDL receptor-like module  
  0.0000000000034   207-244   LDL receptor-like module  
  0.0000000000301   324-364   LDL receptor-like module  
  0.0000000000576   448-488   LDL receptor-like module  
  0.000000000484   246-284   LDL receptor-like module  
  0.000000000707   363-401   LDL receptor-like module  
  0.00000000445   283-325   LDL receptor-like module  
  0.0000000628   494-531   LDL receptor-like module  
HGL_H00000373700   0.0000327   214-246   LDL receptor-like module  
HGL_H00000374135-1   0.000000000144   767-812   LDL receptor-like module  
  0.000000000209   2777-2818   LDL receptor-like module  
  0.000000000236   810-850   LDL receptor-like module  
  0.000000000406   3646-3683   LDL receptor-like module  
  0.000000000576   731-771   LDL receptor-like module  
  0.000000000589   3439-3474   LDL receptor-like module  
  0.000000000733   2646-2682   LDL receptor-like module  
  0.000000000759   3239-3279   LDL receptor-like module  
  0.000000000785   3357-3397   LDL receptor-like module  
  0.0000000011   3560-3604   LDL receptor-like module  
  0.00000000144   3518-3554   LDL receptor-like module  
  0.00000000236   939-975   LDL receptor-like module  
  0.00000000275   892-930   LDL receptor-like module  
  0.00000000288   2566-2603   LDL receptor-like module  
  0.00000000367   3396-3436   LDL receptor-like module  
  0.0000000038   3479-3516   LDL receptor-like module  
  0.00000000602   3202-3237   LDL receptor-like module  
  0.00000000681   2689-2723   LDL receptor-like module  
  0.00000000798   2473-2512   LDL receptor-like module  
  0.00000000812   2432-2473   LDL receptor-like module  
  0.00000000877   3322-3358   LDL receptor-like module  
  0.0000000314   3281-3318   LDL receptor-like module  
  0.0000000367   2606-2643   LDL receptor-like module  
  0.000000249   2726-2766   LDL receptor-like module  
  0.000000301   2527-2562   LDL receptor-like module  
  0.000000419   986-1018   LDL receptor-like module  
  0.000000641   1021-1057   LDL receptor-like module  
  0.00000072   2397-2434   LDL receptor-like module  
  0.00000209   855-890   LDL receptor-like module  
  0.0000144   3606-3638   LDL receptor-like module  
HGL_H00000374135-2   0.000000000055   852-894   LDL receptor-like module  
  0.0000000000563   3570-3609   LDL receptor-like module  
  0.00000000017   933-972   LDL receptor-like module  
  0.000000000288   28-67   LDL receptor-like module  
  0.000000000301   3492-3531   LDL receptor-like module  
  0.000000000301   3611-3647   LDL receptor-like module  
  0.000000000301   3653-3698   LDL receptor-like module  
  0.000000000393   1017-1054   LDL receptor-like module  
  0.000000000393   3373-3417   LDL receptor-like module  
  0.000000000419   893-935   LDL receptor-like module  
  0.000000000563   978-1015   LDL receptor-like module  
  0.000000000798   2698-2734   LDL receptor-like module  
  0.0000000017   2737-2771   LDL receptor-like module  
  0.00000000183   2564-2604   LDL receptor-like module  
  0.00000000262   1061-1101   LDL receptor-like module  
  0.00000000353   3452-3489   LDL receptor-like module  
  0.00000000511   2819-2855   LDL receptor-like module  
  0.0000000072   2604-2643   LDL receptor-like module  
  0.0000000107   3415-3453   LDL receptor-like module  
  0.0000000183   2777-2810   LDL receptor-like module  
  0.0000000236   2857-2896   LDL receptor-like module  
  0.0000000249   3336-3370   LDL receptor-like module  
  0.0000000825   3742-3776   LDL receptor-like module  
  0.000000119   2528-2565   LDL receptor-like module  
  0.000000196   75-110   LDL receptor-like module  
  0.000000681   1110-1144   LDL receptor-like module  
  0.00000126   2663-2693   LDL receptor-like module  
  0.00000144   1147-1182   LDL receptor-like module  
  0.0000209   3695-3731   LDL receptor-like module  
HGL_H00000376619   0.000000017   253-290   LDL receptor-like module  
HGL_H00000376629   0.0000000314   55-93   LDL receptor-like module  
HGL_H00000378131   0.00000000288   237-272   LDL receptor-like module  
  0.000000223   202-234   LDL receptor-like module  
HGL_H00000384120   0.0000000327   291-327   LDL receptor-like module  
HGL_H00000389163   0.00000000000942   467-505   LDL receptor-like module  
  0.000000249   544-583   LDL receptor-like module  
  0.000393   503-539   LDL receptor-like module  
HGL_H00000391216   0.0000000127   154-193   LDL receptor-like module  
HGL_H00000391664   0.0000000089   249-286   LDL receptor-like module  
  0.00000589   409-443   LDL receptor-like module  
HGL_H00000397131   0.00000000000707   102-142   LDL receptor-like module  
  0.0000000000393   141-182   LDL receptor-like module  
  0.000000000144   25-62   LDL receptor-like module  
  0.00000000017   274-311   LDL receptor-like module  
  0.000000000196   211-247   LDL receptor-like module  
  0.000000000445   312-351   LDL receptor-like module  
  0.000000000668   61-104   LDL receptor-like module  
HGL_H00000402226   0.0000000497   32-69   LDL receptor-like module  
HGL_H00000408348   0.0000432   68-108   LDL receptor-like module  
  0.000209   31-66   LDL receptor-like module  
HGL_M00000005352   0.000000000119   1158-1199   LDL receptor-like module  
  0.00000000144   73-106   LDL receptor-like module  
  0.00000000144   143-184   LDL receptor-like module  
  0.00000000144   411-452   LDL receptor-like module  
  0.00000000262   1245-1283   LDL receptor-like module  
  0.00000000275   1281-1319   LDL receptor-like module  
  0.0000000157   1846-1883   LDL receptor-like module  
  0.0000000209   1203-1240   LDL receptor-like module  
  0.0000000249   1085-1120   LDL receptor-like module  
  0.000000144   185-219   LDL receptor-like module  
  0.000000262   454-487   LDL receptor-like module  
  0.0000034   1128-1159   LDL receptor-like module  
  0.0000602   31-63   LDL receptor-like module  
  0.00012   108-145   LDL receptor-like module  
  0.00012   376-413   LDL receptor-like module  
HGL_N10024692   0.00000000707   372-414   LDL receptor-like module  
  0.000000157   26-60   LDL receptor-like module  
 
Weak hits:
HGL_H00000394114   0.000471   181-204   LDL receptor-like module  
HGL_N10000283   0.0012   45-67   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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