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LDL receptor-like module superfamily domain assignments
in
Tupaia belangeri 76

Assignment details

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Tupaia belangeri 76 has 156 significant domains in 37 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000000356   0.000000000798   387-425   LDL receptor-like module  
  0.00000000445   75-112   LDL receptor-like module  
  0.000000011   38-75   LDL receptor-like module  
  0.0000000223   4-39   LDL receptor-like module  
  0.0000000681   114-147   LDL receptor-like module  
  0.000000367   353-385   LDL receptor-like module  
ENSTBEP00000000414   0.00000000785   232-268   LDL receptor-like module  
ENSTBEP00000001922   0.00000011   537-575   LDL receptor-like module  
ENSTBEP00000002779   0.00000000209   258-293   LDL receptor-like module  
  0.00000157   224-255   LDL receptor-like module  
ENSTBEP00000003139   0.0000000000196   25-63   LDL receptor-like module  
  0.000000000055   142-182   LDL receptor-like module  
  0.00000000011   103-143   LDL receptor-like module  
  0.000000000393   197-233   LDL receptor-like module  
  0.000000000746   66-104   LDL receptor-like module  
ENSTBEP00000005042   0.0000000000956   3444-3486   LDL receptor-like module  
  0.000000000314   2884-2925   LDL receptor-like module  
  0.000000000327   3561-3598   LDL receptor-like module  
  0.000000000471   3727-3766   LDL receptor-like module  
  0.000000000615   2753-2789   LDL receptor-like module  
  0.000000000746   3600-3636   LDL receptor-like module  
  0.000000000746   3348-3388   LDL receptor-like module  
  0.0000000011   3642-3686   LDL receptor-like module  
  0.00000000157   1005-1041   LDL receptor-like module  
  0.00000000288   2796-2830   LDL receptor-like module  
  0.00000000497   2539-2580   LDL receptor-like module  
  0.00000000576   3311-3346   LDL receptor-like module  
  0.00000000851   3524-3557   LDL receptor-like module  
  0.0000000102   2580-2619   LDL receptor-like module  
  0.0000000111   3390-3428   LDL receptor-like module  
  0.0000000262   1090-1126   LDL receptor-like module  
  0.0000000406   3485-3523   LDL receptor-like module  
  0.0000000432   2633-2669   LDL receptor-like module  
  0.0000000707   2832-2873   LDL receptor-like module  
  0.000000144   2507-2541   LDL receptor-like module  
  0.000000497   964-1004   LDL receptor-like module  
  0.000000497   1129-1165   LDL receptor-like module  
  0.00000144   847-880   LDL receptor-like module  
  0.00000825   76-109   LDL receptor-like module  
  0.0000144   3689-3720   LDL receptor-like module  
ENSTBEP00000005156   0.00000000000942   210-248   LDL receptor-like module  
  0.0000000419   287-326   LDL receptor-like module  
  0.0000262   246-282   LDL receptor-like module  
ENSTBEP00000005807   0.0000000000144   423-461   LDL receptor-like module  
  0.00000000144   137-173   LDL receptor-like module  
  0.000000106   384-422   LDL receptor-like module  
  0.000000123   185-227   LDL receptor-like module  
  0.000000615   347-384   LDL receptor-like module  
ENSTBEP00000005945   0.0000000327   241-277   LDL receptor-like module  
ENSTBEP00000006417   0.000000000746   1301-1337   LDL receptor-like module  
  0.00000000458   1263-1299   LDL receptor-like module  
  0.00000000563   1223-1261   LDL receptor-like module  
ENSTBEP00000007083   0.0000000445   367-403   LDL receptor-like module  
  0.000000209   408-447   LDL receptor-like module  
  0.00000838   338-376   LDL receptor-like module  
ENSTBEP00000007341   0.000000576   97-129   LDL receptor-like module  
ENSTBEP00000007348   0.000000183   36-67   LDL receptor-like module  
ENSTBEP00000007549   0.0000000000223   1235-1277   LDL receptor-like module  
  0.0000000000406   2827-2866   LDL receptor-like module  
  0.000000000196   3755-3795   LDL receptor-like module  
  0.000000000262   3589-3628   LDL receptor-like module  
  0.000000000275   1-35   LDL receptor-like module  
  0.00000000034   1115-1155   LDL receptor-like module  
  0.000000000524   2707-2746   LDL receptor-like module  
  0.00000000055   3038-3079   LDL receptor-like module  
  0.000000000641   3681-3717   LDL receptor-like module  
  0.000000000707   1078-1115   LDL receptor-like module  
  0.000000000956   73-113   LDL receptor-like module  
  0.00000000106   2951-2992   LDL receptor-like module  
  0.00000000114   3719-3756   LDL receptor-like module  
  0.00000000126   153-188   LDL receptor-like module  
  0.00000000126   1037-1074   LDL receptor-like module  
  0.00000000353   994-1031   LDL receptor-like module  
  0.0000000038   3547-3591   LDL receptor-like module  
  0.00000000537   3803-3847   LDL receptor-like module  
  0.00000000785   1156-1194   LDL receptor-like module  
  0.000000013   3844-3879   LDL receptor-like module  
  0.0000000196   235-271   LDL receptor-like module  
  0.0000000343   1197-1235   LDL receptor-like module  
  0.000000055   2783-2829   LDL receptor-like module  
  0.000000353   2912-2951   LDL receptor-like module  
  0.00000038   2991-3032   LDL receptor-like module  
  0.000000511   1281-1317   LDL receptor-like module  
  0.000000759   3638-3679   LDL receptor-like module  
  0.00000157   2750-2788   LDL receptor-like module  
  0.0000118   37-72   LDL receptor-like module  
  0.000314   2872-2909   LDL receptor-like module  
  0.00262   131-150   LDL receptor-like module  
ENSTBEP00000007791   0.000000072   281-317   LDL receptor-like module  
ENSTBEP00000008005   0.0000000668   257-293   LDL receptor-like module  
ENSTBEP00000008057   0.000000157   121-153   LDL receptor-like module  
ENSTBEP00000009108   0.0000000000524   630-668   LDL receptor-like module  
  0.000000511   167-207   LDL receptor-like module  
ENSTBEP00000009117   0.000000000615   1196-1234   LDL receptor-like module  
  0.00000000118   1117-1157   LDL receptor-like module  
  0.00000000694   1158-1194   LDL receptor-like module  
ENSTBEP00000009563   0.00000000458   151-189   LDL receptor-like module  
ENSTBEP00000009740   0.0000000000223   319-356   LDL receptor-like module  
  0.000157   249-274   LDL receptor-like module  
  0.00123   277-318   LDL receptor-like module  
ENSTBEP00000009966   0.0000000511   145-181   LDL receptor-like module  
ENSTBEP00000010091   0.00000017   172-206   LDL receptor-like module  
ENSTBEP00000010127   0.00000000000236   233-272   LDL receptor-like module  
  0.00000000000327   31-68   LDL receptor-like module  
  0.0000000000419   271-311   LDL receptor-like module  
  0.0000000000654   149-188   LDL receptor-like module  
  0.000000000432   70-108   LDL receptor-like module  
  0.00000000301   107-149   LDL receptor-like module  
  0.0000000628   317-354   LDL receptor-like module  
  0.000000681   187-224   LDL receptor-like module  
ENSTBEP00000010238   0.000000000327   247-284   LDL receptor-like module  
  0.000000000812   35-78   LDL receptor-like module  
  0.00000000694   69-113   LDL receptor-like module  
  0.00000017   1-31   LDL receptor-like module  
ENSTBEP00000010266   0.000000000102   440-478   LDL receptor-like module  
  0.000000000249   301-338   LDL receptor-like module  
  0.00000000563   260-296   LDL receptor-like module  
  0.00000000825   336-372   LDL receptor-like module  
  0.00000000851   376-414   LDL receptor-like module  
  0.00000327   481-520   LDL receptor-like module  
  0.000406   561-597   LDL receptor-like module  
ENSTBEP00000011393   0.000000785   80-112   LDL receptor-like module  
  0.000131   127-156   LDL receptor-like module  
  0.000432   162-202   LDL receptor-like module  
ENSTBEP00000011626   0.0000000000288   246-286   LDL receptor-like module  
  0.000000000157   210-248   LDL receptor-like module  
  0.000000000563   291-327   LDL receptor-like module  
  0.000000000785   50-88   LDL receptor-like module  
  0.0000000072   169-207   LDL receptor-like module  
  0.00000144   8-50   LDL receptor-like module  
ENSTBEP00000012322   0.0000000000393   841-883   LDL receptor-like module  
  0.000000000113   3640-3685   LDL receptor-like module  
  0.000000000131   15-53   LDL receptor-like module  
  0.00000000017   921-960   LDL receptor-like module  
  0.000000000406   3356-3400   LDL receptor-like module  
  0.000000000406   1006-1044   LDL receptor-like module  
  0.000000000511   966-1003   LDL receptor-like module  
  0.000000000628   2547-2588   LDL receptor-like module  
  0.000000000694   1049-1089   LDL receptor-like module  
  0.0000000017   3599-3635   LDL receptor-like module  
  0.00000000851   2588-2627   LDL receptor-like module  
  0.0000000183   3398-3435   LDL receptor-like module  
  0.0000000223   884-923   LDL receptor-like module  
  0.000000327   3323-3353   LDL receptor-like module  
  0.00000183   66-97   LDL receptor-like module  
  0.0223   3681-3717   LDL receptor-like module  
ENSTBEP00000013219   0.0000000327   12-49   LDL receptor-like module  
ENSTBEP00000013763   0.0000000969   142-182   LDL receptor-like module  
ENSTBEP00000014056   0.000000000034   13-49   LDL receptor-like module  
  0.000000000798   53-91   LDL receptor-like module  
ENSTBEP00000014257   0.0000445   438-470   LDL receptor-like module  
ENSTBEP00000014573   0.0000638   79-119   LDL receptor-like module  
ENSTBEP00000014645   0.0000000000419   377-414   LDL receptor-like module  
  0.000000000157   87-124   LDL receptor-like module  
  0.000000000982   133-172   LDL receptor-like module  
  0.00000157   338-375   LDL receptor-like module  
  0.00144   290-336   LDL receptor-like module  
ENSTBEP00000014670   0.00000000000471   1320-1358   LDL receptor-like module  
  0.0000000000445   1098-1137   LDL receptor-like module  
  0.0000000017   1274-1307   LDL receptor-like module  
  0.00000000432   1142-1175   LDL receptor-like module  
  0.0000000123   1374-1411   LDL receptor-like module  
  0.0000000511   1417-1454   LDL receptor-like module  
  0.00000615   1184-1214   LDL receptor-like module  
ENSTBEP00000015342   0.000000144   55-93   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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