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TSP-1 type 1 repeat superfamily domain assignments
in
Caenorhabditis elegans 69_215

Assignment details

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Caenorhabditis elegans 69_215 has 102 significant domains in 34 proteins.

     

Sequence ID   Evalue   Region   Family  
B0273.4a   0.0000000000119   274-320   TSP-1 type 1 repeat  
  0.000183   201-268   TSP-1 type 1 repeat  
C02B4.1   0.000000000000249   1320-1377   TSP-1 type 1 repeat  
  0.00000000000275   1204-1255   TSP-1 type 1 repeat  
  0.00000000000837   1264-1314   TSP-1 type 1 repeat  
  0.0000000000732   1382-1431   TSP-1 type 1 repeat  
  0.0000000000746   800-851   TSP-1 type 1 repeat  
  0.0000000017   1040-1082   TSP-1 type 1 repeat  
  0.00000000785   905-951   TSP-1 type 1 repeat  
  0.0000000327   851-897   TSP-1 type 1 repeat  
  0.000000222   709-751   TSP-1 type 1 repeat  
  0.00000157   758-801   TSP-1 type 1 repeat  
  0.00000157   1087-1126   TSP-1 type 1 repeat  
  0.0000249   1149-1194   TSP-1 type 1 repeat  
  0.00288   546-601   TSP-1 type 1 repeat  
C11H1.5   0.00000222   21-76   TSP-1 type 1 repeat  
C17G1.6a   0.00000000106   576-626   TSP-1 type 1 repeat  
C26C6.3   0.00000000419   507-555   TSP-1 type 1 repeat  
C27A7.8b   0.00000000628   21-74   TSP-1 type 1 repeat  
C27A7.9   0.00000000144   19-73   TSP-1 type 1 repeat  
C36B7.5b   0.00000000209   547-593   TSP-1 type 1 repeat  
  0.00000000392   348-391   TSP-1 type 1 repeat  
  0.00000000902   447-493   TSP-1 type 1 repeat  
  0.0000000157   593-624   TSP-1 type 1 repeat  
  0.000000128   976-1025   TSP-1 type 1 repeat  
  0.00000017   1076-1128   TSP-1 type 1 repeat  
  0.000000288   396-440   TSP-1 type 1 repeat  
  0.00000222   492-540   TSP-1 type 1 repeat  
  0.0000249   305-348   TSP-1 type 1 repeat  
  0.000262   697-729   TSP-1 type 1 repeat  
C37C3.6b.1   0.00000000405   344-401   TSP-1 type 1 repeat  
  0.0000000131   642-701   TSP-1 type 1 repeat  
  0.000000118   461-524   TSP-1 type 1 repeat  
  0.000000654   579-641   TSP-1 type 1 repeat  
  0.00000288   400-462   TSP-1 type 1 repeat  
  0.000068   77-122   TSP-1 type 1 repeat  
D1022.2   0.0000929   45-87   TSP-1 type 1 repeat  
F01F1.13   0.0000000222   62-105   TSP-1 type 1 repeat  
  0.0000314   117-156   TSP-1 type 1 repeat  
F08C6.1a.1   0.0000000000288   755-810   TSP-1 type 1 repeat  
  0.000000000275   966-1014   TSP-1 type 1 repeat  
  0.000000000314   917-958   TSP-1 type 1 repeat  
  0.000000000445   860-910   TSP-1 type 1 repeat  
  0.00000000068   814-857   TSP-1 type 1 repeat  
  0.0000000719   701-750   TSP-1 type 1 repeat  
F09F9.4   0.000000000000275   317-369   TSP-1 type 1 repeat  
F10E7.4   0.0000000000249   432-481   TSP-1 type 1 repeat  
  0.0000000000759   704-753   TSP-1 type 1 repeat  
  0.000000000536   559-610   TSP-1 type 1 repeat  
  0.000000000732   761-815   TSP-1 type 1 repeat  
  0.00000000144   496-543   TSP-1 type 1 repeat  
F11C7.2   0.0000000471   70-118   TSP-1 type 1 repeat  
  0.00876   17-66   TSP-1 type 1 repeat  
F11C7.6a   0.0000000196   31-81   TSP-1 type 1 repeat  
F11C7.7   0.0000000419   29-79   TSP-1 type 1 repeat  
F14H12.3   0.000000000000732   85-139   TSP-1 type 1 repeat  
  0.0000000602   37-80   TSP-1 type 1 repeat  
  0.000000301   138-189   TSP-1 type 1 repeat  
F15B9.8.1   0.000000123   98-143   TSP-1 type 1 repeat  
F23H12.5   0.00000157   29-70   TSP-1 type 1 repeat  
  0.00017   705-731   TSP-1 type 1 repeat  
F25H8.3b   0.0000000000863   1366-1423   TSP-1 type 1 repeat  
  0.000000000235   587-657   TSP-1 type 1 repeat  
  0.000000000523   1539-1599   TSP-1 type 1 repeat  
  0.00000000103   1240-1296   TSP-1 type 1 repeat  
  0.00000000109   1636-1694   TSP-1 type 1 repeat  
  0.00000000157   1885-1938   TSP-1 type 1 repeat  
  0.00000000222   1291-1353   TSP-1 type 1 repeat  
  0.0000000183   1074-1125   TSP-1 type 1 repeat  
  0.0000000209   1689-1750   TSP-1 type 1 repeat  
  0.0000000249   1808-1880   TSP-1 type 1 repeat  
  0.0000000405   1125-1184   TSP-1 type 1 repeat  
  0.000000235   1492-1538   TSP-1 type 1 repeat  
  0.000000889   1180-1241   TSP-1 type 1 repeat  
  0.00000196   1013-1076   TSP-1 type 1 repeat  
  0.00000654   1418-1483   TSP-1 type 1 repeat  
  0.0000235   1745-1809   TSP-1 type 1 repeat  
  0.000353   954-1015   TSP-1 type 1 repeat  
  0.00209   904-956   TSP-1 type 1 repeat  
F35C11.7   0.00000000497   45-92   TSP-1 type 1 repeat  
F53B6.2a   0.00000000916   511-573   TSP-1 type 1 repeat  
  0.0000000222   381-437   TSP-1 type 1 repeat  
  0.000000127   25-70   TSP-1 type 1 repeat  
  0.000000183   451-509   TSP-1 type 1 repeat  
  0.000000432   294-340   TSP-1 type 1 repeat  
  0.00000275   237-295   TSP-1 type 1 repeat  
  0.00000366   576-634   TSP-1 type 1 repeat  
  0.0000116   927-987   TSP-1 type 1 repeat  
  0.0000536   811-872   TSP-1 type 1 repeat  
F53B7.5a   0.000000157   2816-2863   TSP-1 type 1 repeat  
H42K12.3.1   0.0000222   383-422   TSP-1 type 1 repeat  
R05A10.5   0.0000131   28-86   TSP-1 type 1 repeat  
R151.5a   0.0000000000144   488-539   TSP-1 type 1 repeat  
R17.3   0.00000000785   243-294   TSP-1 type 1 repeat  
T19D2.1   0.000000000562   834-880   TSP-1 type 1 repeat  
  0.0000000183   891-940   TSP-1 type 1 repeat  
  0.00000249   789-829   TSP-1 type 1 repeat  
  0.000824   706-748   TSP-1 type 1 repeat  
T21B6.3   0.00000000000235   553-603   TSP-1 type 1 repeat  
  0.000000000183   453-502   TSP-1 type 1 repeat  
  0.000000000811   605-651   TSP-1 type 1 repeat  
  0.000000000929   705-759   TSP-1 type 1 repeat  
  0.0000000116   504-551   TSP-1 type 1 repeat  
  0.0000000183   651-699   TSP-1 type 1 repeat  
  0.00000183   762-809   TSP-1 type 1 repeat  
  0.0249   161-193   TSP-1 type 1 repeat  
Y64G10A.1   0.0000419   22-79   TSP-1 type 1 repeat  
Y67A10A.11   0.0000144   22-79   TSP-1 type 1 repeat  
Y73E7A.8   0.00000719   61-100   TSP-1 type 1 repeat  
Y8A9A.2   0.000000000222   1203-1249   TSP-1 type 1 repeat  
  0.00000549   656-709   TSP-1 type 1 repeat  
  0.000157   1001-1058   TSP-1 type 1 repeat  
  0.000275   1100-1156   TSP-1 type 1 repeat  
  0.00101   806-862   TSP-1 type 1 repeat  
 
Weak hits:
F02H6.6   0.000249   22-79   TSP-1 type 1 repeat  
F02H6.7   0.00173   61-118   TSP-1 type 1 repeat  
F22D3.4   0.00902   296-317   TSP-1 type 1 repeat  
F52C9.5   0.00275   478-513   TSP-1 type 1 repeat  
F58F9.10   0.000222   34-89   TSP-1 type 1 repeat  
F58F9.6   0.00157   26-82   TSP-1 type 1 repeat  
F58F9.8   0.000288   26-83   TSP-1 type 1 repeat  
F58F9.9   0.00118   26-83   TSP-1 type 1 repeat  
  0.0693   121-165   TSP-1 type 1 repeat  
K04E7.3   0.000107   551-595   TSP-1 type 1 repeat  
R07A4.4   0.00889   450-487   TSP-1 type 1 repeat  
Y37E11AR.7   0.00209   236-263   TSP-1 type 1 repeat  

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Select to display   Genome       Domains   Proteins
No Yes ALL   291184 291184
No Yes Homo sapiens 76_38 Human 611 154
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 244 62
No Yes Gorilla gorilla 76_3.1 Western gorilla 316 84
No Yes Pongo abelii 76_2 Sumatran orangutan 227 60
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 247 61
No Yes Papio anubis 76 Olive baboon 275 67
No Yes Macaca mulatta 76_1 Rhesus monkey 347 97
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 590 144
No Yes Otolemur garnettii 76_3 Small-eared galago 254 67
No Yes Microcebus murinus 76_1 Gray mouse lemur 186 57
No Yes Rattus norvegicus 76_5.0 Norway rat 277 73
No Yes Mus musculus 76_38 House mouse 545 129
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 191 56
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 307 68
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 241 62
No Yes Cavia porcellus 76_3 Domestic guinea pig 276 65
No Yes Oryctolagus cuniculus 76_2 Rabbit 262 59
No Yes Ochotona princeps 76 American pika 204 59
No Yes Tupaia belangeri 76 Northern tree shrew 151 54
No Yes Sus scrofa 76_10.2 Pig 270 76
No Yes Bos taurus 76_3.1 Cattle 315 70
No Yes Ovis aries 76_3.1 Sheep 253 68
No Yes Vicugna pacos 76_1 Alpaca 123 34
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 223 61
No Yes Mustela putorius furo 76_1.0 Domestic ferret 276 63
No Yes Ailuropoda melanoleuca 76_1 Giant panda 308 77
No Yes Canis familiaris 76_3.1 Dog 369 81
No Yes Felis catus 76_6.2 Domestic cat 266 65
No Yes Equus caballus 76_2 Horse 351 75
No Yes Myotis lucifugus 76_2.0 Little brown bat 222 57
No Yes Pteropus vampyrus 76_1 Large flying fox 218 60
No Yes Sorex araneus 76_1 European shrew 127 40
No Yes Erinaceus europaeus 76 Western European hedgehog 145 47
No Yes Procavia capensis 76_1 Cape rock hyrax 192 62
No Yes Loxodonta africana 76_3 African savanna elephant 297 87
No Yes Echinops telfairi 76 Small Madagascar hedgehog 175 60
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 278 72
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 127 37
No Yes Macropus eugenii 76_1.0 Tammar wallaby 187 58
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 298 79
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 259 64
No Yes Ornithorhynchus anatinus 76_5 Platypus 237 77
No Yes Saccoglossus kowalevskii v3.0   431 141
No Yes Petromyzon marinus 76_7.0 Sea lamprey 192 50
No Yes Meleagris gallopavo 76_2 Turkey 261 75
No Yes Gallus gallus 76_4 Chicken 273 64
No Yes Anas platyrhynchos 76_1.0 Mallard 236 61
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 256 67
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 236 61
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 285 79
No Yes Anolis carolinensis 76_2.0 Green anole 285 67
No Yes Xenopus laevis African clawed frog 113 56
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 302 74
No Yes Latimeria chalumnae 76_1 Coelacanth 302 94
No Yes Lepisosteus oculatus 76 Spotted gar 422 94
No Yes Gadus morhua 76_1 Atlantic cod 275 80
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 317 90
No Yes Takifugu rubripes 76_4 Torafugu 1009 288
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 355 102
No Yes Oryzias latipes 76_1 Japanese medaka 332 91
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 311 81
No Yes Poecilia formosa 76 Amazon molly 317 83
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 460 112
No Yes Astyanax mexicanus 76 Mexican tetra 298 88
No Yes Danio rerio 76_9 Zebrafish 461 131
No Yes Oikopleura dioica   363 99
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 407 115
No Yes Ciona intestinalis 76 Vase tunicate 356 104
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 260 75
No Yes Adineta vaga   128 25
No Yes Octopus bimaculoides 280   209 67
No Yes Crassostrea gigas 22 Pacific oyster 404 118
No Yes Lottia gigantea Owl limpet 171 61
No Yes Helobdella robusta   108 29
No Yes Capitella sp. I   195 90
No Yes Danaus plexippus OGS1.0 Monarch butterfly 60 29
No Yes Heliconius melpomene Postman butterfly 45 23
No Yes Bombyx mori Domestic silkworm 37 19
No Yes Nasonia vitripennis Jewel wasp 56 16
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 183 61
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 62 19
No Yes Linepithema humile v1.1 Argentine ant 67 25
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 57 21
No Yes Solenopsis invicta v.2.2.3 Red fire ant 44 23
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 64 20
No Yes Atta cephalotes v1.1   64 24
No Yes Camponotus floridanus v3.3 Florida carpenter ant 67 18
No Yes Lucilia cuprina Australian sheep blowfly 53 15
No Yes Drosophila grimshawi 1.3   54 16
No Yes Drosophila willistoni 1.3   54 15
No Yes Drosophila pseudoobscura 2.13   52 15
No Yes Drosophila persimilis 1.3   48 15
No Yes Drosophila suzukii   50 14
No Yes Drosophila yakuba 1.3   51 16
No Yes Drosophila simulans 1.3   49 16
No Yes Drosophila sechellia 1.3   47 13
No Yes Drosophila melanogaster 76_5 Fruit fly 130 28
No Yes Drosophila erecta 1.3   52 16
No Yes Drosophila ananassae 1.3   55 17
No Yes Drosophila virilis 1.2   49 15
No Yes Drosophila mojavensis 1.3   49 14
No Yes Megaselia scalaris 22   14 7
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 48 13
No Yes Culex pipiens quinquefasciatus Southern house mosquito 56 20
No Yes Anopheles darlingi 22 American malaria mosquito 34 15
No Yes Anopheles gambiae 49_3j African malaria mosquito 42 14
No Yes Tribolium castaneum 3.0 Red flour beetle 56 15
No Yes Pediculus humanus corporis (Early assembly) Human body louse 52 16
No Yes Acyrthosiphon pisum Pea aphid 44 8
No Yes Rhodnius prolixus 22   40 14
No Yes Daphnia pulex Common water flea 62 15
No Yes Strigamia maritima 22   77 21
No Yes Sarcoptes scabiei   31 8
No Yes Tetranychus urticae Two-spotted spider mite 20 8
No Yes Ixodes scapularis (Preliminary) Black-legged tick 42 10
No Yes Pristionchus pacificus   52 21
No Yes Meloidogyne incognita Southern root-knot nematode 67 20
No Yes Meloidogyne hapla   40 10
No Yes Onchocerca volvulus 22   72 22
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 106 29
No Yes Caenorhabditis japonica   82 27
No Yes Caenorhabditis brenneri   129 38
No Yes Caenorhabditis remanei   96 33
No Yes Caenorhabditis elegans 76_235 Roundworm 198 54
No Yes Caenorhabditis briggsae 2   94 32
No Yes Trichinella spiralis 22   74 25
No Yes Hymenolepis microstoma   28 13
No Yes Echinococcus multilocularis   31 15
No Yes Echinococcus granulosus   29 14
No Yes Taenia solium Pork tapeworm 30 18
No Yes Schistosoma mansoni   31 15
No Yes Mnemiopsis leidyi Sea walnut 94 47
No Yes Thelohanellus kitauei   4 3
No Yes Acropora digitifera v1.0   291 127
No Yes Nematostella vectensis 1.0 Starlet sea anemone 295 125
No Yes Hydra vulgaris   345 115
No Yes Amphimedon queenslandica   44 18
No Yes Trichoplax adhaerens   35 9
No Yes Proterospongia sp. ATCC 50818   15 10
No Yes Monosiga brevicollis   6 3
No Yes Sphaeroforma arctica JP610   22 12
No Yes Capsaspora owczarzaki ATCC 30864   50 9
No Yes Dictyostelium discoideum   2 1
No Yes Dictyostelium purpureum   5 4
No Yes Selaginella moellendorffii   6 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Aquilegia coerulea v195   3 3
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   2 2
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 3 3
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   8 3
No Yes Asterochloris sp. Cgr/DA1pho v1.0   7 3
No Yes Chlorella variabilis sp. NC64A   10 3
No Yes Chlorella vulgaris   5 2
No Yes Ostreococcus sp. RCC809   8 5
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   10 4
No Yes Micromonas sp. RCC299   4 2
No Yes Micromonas pusilla CCMP1545 v3.0   8 4
No Yes Thecamonas trahens ATCC 50062   4 1
No Yes Bigelowiella natans CCMP2755 22   14 7
No Yes Ectocarpus siliculosus   1 1
No Yes Pythium iwayamai DAOM BR242034 22   31 4
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   46 5
No Yes Pythium aphanidermatum DAOM BR444 22   42 3
No Yes Pythium irregulare DAOM BR486 22   36 3
No Yes Pythium vexans DAOM BR484 22   28 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 40 3
No Yes Phytophthora sojae 1.1   79 7
No Yes Phytophthora infestans T30-4   25 2
No Yes Phytophthora capsici   24 1
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Cryptosporidium hominis   17 7
No Yes Cryptosporidium muris   31 10
No Yes Cryptosporidium parvum Iowa II   30 10
No Yes Neospora caninum   30 8
No Yes Toxoplasma gondii VEG   24 6
No Yes Toxoplasma gondii ME49   24 6
No Yes Toxoplasma gondii GT1   25 6
No Yes Babesia bovis T2Bo   8 8
No Yes Theileria parva   4 4
No Yes Theileria annulata   4 4
No Yes Plasmodium falciparum 3D7   10 8
No Yes Plasmodium vivax SaI-1 7.0   11 9
No Yes Plasmodium knowlesi strain H   7 7
No Yes Plasmodium yoelii ssp. yoelii 1   10 7
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 7
No Yes Symbiodinium minutum clade B1 v1.2   473 75
No Yes Guillardia theta CCMP2712 v1.0   14 5
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Desulfatibacillum alkenivorans AK-01   7 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 283 84
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 122 28
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 55 17
No Yes Ascaris suum Victoria/Ghent Pig roundworm 77 23
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 140 44
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Neospora caninum Nc-Liverpool 6.2   30 8
No Yes Plasmodium falciparum HB3   10 8
No Yes Plasmodium falciparum Dd2   8 6
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Bdellovibrio exovorus JSS   5 3
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 633 165
No Yes Homo sapiens (NCBI version) Human 341 81
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 265 63
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 80 27
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 77 39
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 66 19
No Yes Homo sapiens 69_37 Human 272 67
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 233 59
No Yes Gorilla gorilla 69_3.1 Western gorilla 253 63
No Yes Pongo abelii 69_2 Sumatran orangutan 227 60
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 243 62
No Yes Macaca mulatta 69_1 Rhesus monkey 236 63
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 270 64
No Yes Otolemur garnettii 69_3 Small-eared galago 252 66
No Yes Microcebus murinus 69_1 Gray mouse lemur 186 57
No Yes Rattus norvegicus 69_3.4 Norway rat 243 58
No Yes Mus musculus 69_38 House mouse 286 64
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 191 56
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 244 62
No Yes Cavia porcellus 69_3 Domestic guinea pig 260 60
No Yes Oryctolagus cuniculus 69_2 Rabbit 257 57
No Yes Ochotona princeps 69 American pika 204 59
No Yes Tupaia belangeri 69 Northern tree shrew 151 54
No Yes Sus scrofa 69_10.2 Pig 213 64
No Yes Bos taurus 69_3.1 Cattle 275 62
No Yes Vicugna pacos 69_1 Alpaca 123 34
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 223 61
No Yes Mustela putorius furo 69_1.0 Domestic ferret 276 63
No Yes Ailuropoda melanoleuca 69_1 Giant panda 270 67
No Yes Canis familiaris 69_3.1 Dog 258 60
No Yes Felis catus 69 Domestic cat 155 52
No Yes Equus caballus 69_2 Horse 255 61
No Yes Myotis lucifugus 69_2.0 Little brown bat 218 56
No Yes Pteropus vampyrus 69_1 Large flying fox 218 60
No Yes Sorex araneus 69_1 European shrew 127 40
No Yes Erinaceus europaeus 69 Western European hedgehog 145 47
No Yes Procavia capensis 69_1 Cape rock hyrax 192 62
No Yes Loxodonta africana 69_3 African savanna elephant 221 64
No Yes Echinops telfairi 69 Small Madagascar hedgehog 175 60
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 159 52
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 127 37
No Yes Macropus eugenii 69_1.0 Tammar wallaby 187 58
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 244 64
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 252 61
No Yes Ornithorhynchus anatinus 69_5 Platypus 207 69
No Yes Petromyzon marinus 69_7.0 Sea lamprey 130 39
No Yes Meleagris gallopavo 69_2 Turkey 238 67
No Yes Gallus gallus 69_2 Chicken 240 63
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 253 65
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 243 64
No Yes Anolis carolinensis 69_2.0 Green anole 264 66
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 274 66
No Yes Latimeria chalumnae 69_1 Coelacanth 253 74
No Yes Gadus morhua 69_1 Atlantic cod 263 74
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 240 69
No Yes Takifugu rubripes 69_4 Torafugu 284 74
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 307 79
No Yes Oryzias latipes 69_1 Japanese medaka 267 69
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 311 81
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 330 79
No Yes Danio rerio 69_9 Zebrafish 332 90
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 200 56
No Yes Ciona intestinalis 69 Vase tunicate 333 99
No Yes Drosophila melanogaster 69_5 Fruit fly 52 15
No Yes Caenorhabditis elegans 69_215 Roundworm 102 34
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes NCBI 2017_08 genome   129968 31969
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   277 136
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   2 1
No Yes STRING v9.0.5 (STRING)   9521 2746
No Yes Uniprot 2018_03 genome   78679 23035
No Yes Global Ocean Sampling Expedition (GOS)   593 226
No Yes PDB chains (SCOP 1.75) (PDB)   2 1
No Yes Protein Data Bank (all PDB sequenc)   122 87
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   107 107
No Yes TargetDB (Targets)   310 101

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