SUPERFAMILY 1.75 HMM library and genome assignments server

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EGF/Laminin superfamily domain assignments
in
Vicugna pacos 69_1

Assignment details

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Vicugna pacos 69_1 has 260 significant domains in 102 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000000171   0.0000461   518-553   EGF-type module  
ENSVPAP00000000552   0.000000000000887   260-305   EGF-type module  
ENSVPAP00000000690   0.00000036   3904-3944   EGF-type module  
  0.000000364   3864-3906   EGF-type module  
ENSVPAP00000000900   0.000000000201   2-39   EGF-type module  
ENSVPAP00000000938   0.0000000837   393-440   Laminin-type module  
  0.0000000865   438-483   Laminin-type module  
  0.000000837   533-583   Laminin-type module  
  0.000146   1647-1692   Laminin-type module  
  0.000184   586-627   Laminin-type module  
  0.00474   488-530   Laminin-type module  
  0.0067   217-249   Laminin-type module  
ENSVPAP00000001112   0.0000000921   359-401   EGF-type module  
  0.000000641   395-428   EGF-type module  
  0.0000234   676-722   EGF-type module  
ENSVPAP00000001128   0.000000000502   818-870   Laminin-type module  
  0.00000000184   868-921   Laminin-type module  
  0.00000000809   1422-1473   Laminin-type module  
  0.000000013   1479-1531   Laminin-type module  
  0.0000000335   760-812   Laminin-type module  
  0.000000134   290-349   Laminin-type module  
  0.000000134   1062-1110   Laminin-type module  
  0.0000014   969-1018   Laminin-type module  
  0.0000106   921-966   Laminin-type module  
  0.000017   1016-1059   Laminin-type module  
  0.0000195   347-419   Laminin-type module  
  0.000206   1529-1569   Laminin-type module  
  0.000586   1379-1406   Laminin-type module  
  0.00153   1126-1170   Laminin-type module  
ENSVPAP00000001255   0.0000197   492-552   EGF-type module  
  0.000237   465-497   EGF-type module  
ENSVPAP00000001267   0.000000000644   117-156   EGF-type module  
  0.00000000437   74-121   EGF-type module  
  0.0000000507   19-60   EGF-type module  
ENSVPAP00000001326   0.00000559   555-591   EGF-type module  
  0.0112   970-1001   EGF-type module  
ENSVPAP00000001544   0.000000419   277-335   Laminin-type module  
  0.0000698   333-375   Laminin-type module  
ENSVPAP00000001756   0.0000000157   668-709   EGF-type module  
  0.000000133   597-635   EGF-type module  
  0.000000184   634-677   EGF-type module  
  0.0351   367-406   Laminin-type module  
ENSVPAP00000001926   0.0000000149   589-628   Integrin beta EGF-like domains  
  0.000000502   545-583   Integrin beta EGF-like domains  
  0.000893   509-545   Integrin beta EGF-like domains  
ENSVPAP00000001932   0.000000753   1026-1071   Laminin-type module  
  0.000658   62-94   EGF-type module  
  0.00646   211-248   EGF-type module  
ENSVPAP00000001957   0.00000000292   925-967   EGF-type module  
ENSVPAP00000002071   0.000000000000435   253-298   EGF-type module  
  0.00404   55-85   EGF-type module  
ENSVPAP00000002259   0.0000000158   30-74   EGF-type module  
ENSVPAP00000002512   0.0000000558   580-620   Integrin beta EGF-like domains  
  0.00000067   538-576   Integrin beta EGF-like domains  
  0.00977   506-538   Integrin beta EGF-like domains  
ENSVPAP00000002542   0.00000787   643-691   EGF-type module  
ENSVPAP00000002584   0.000000314   33-73   EGF-type module  
ENSVPAP00000002707   0.0000000000357   906-943   EGF-type module  
  0.000000162   3-35   EGF-type module  
ENSVPAP00000002733   0.0000000408   111-154   EGF-type module  
  0.00117   75-110   EGF-type module  
ENSVPAP00000002944   0.0000274   68-89   EGF-type module  
ENSVPAP00000002945   0.000000000000198   62-105   EGF-type module  
ENSVPAP00000002947   0.000000000000344   9-55   EGF-type module  
ENSVPAP00000003161   0.00000000984   93-136   EGF-type module  
  0.0000041   138-184   EGF-type module  
  0.0419   68-100   EGF-type module  
ENSVPAP00000003191   0.0000524   606-646   EGF-type module  
ENSVPAP00000003240   0.00000000212   329-371   EGF-type module  
  0.0000000104   250-290   EGF-type module  
  0.00000592   214-250   EGF-type module  
  0.00803   135-163   EGF-type module  
ENSVPAP00000003635   0.0000000000419   241-285   EGF-type module  
  0.00000023   39-83   EGF-type module  
  0.00000104   3-42   EGF-type module  
  0.00000112   132-169   EGF-type module  
  0.00000364   171-209   EGF-type module  
ENSVPAP00000003652   0.0000658   170-207   EGF-type module  
ENSVPAP00000003729   0.0000399   424-448   Follistatin (FS) module N-terminal domain, FS-N  
ENSVPAP00000003775   0.0000000963   3204-3246   EGF-type module  
  0.000000109   3171-3212   EGF-type module  
  0.00000191   3735-3772   EGF-type module  
  0.0000485   3112-3175   EGF-type module  
ENSVPAP00000003830   0.00000781   579-619   Integrin beta EGF-like domains  
  0.0000106   538-576   Integrin beta EGF-like domains  
  0.0123   505-539   Integrin beta EGF-like domains  
ENSVPAP00000004084   0.0000523   512-548   EGF-type module  
ENSVPAP00000004166   0.0000000000544   683-735   Laminin-type module  
  0.000000000391   1286-1337   Laminin-type module  
  0.0000000019   733-784   Laminin-type module  
  0.00000028   1344-1394   Laminin-type module  
  0.000000363   155-205   Laminin-type module  
  0.00000142   1392-1431   Laminin-type module  
  0.00000148   642-678   Laminin-type module  
  0.00000474   835-884   Laminin-type module  
  0.0000977   879-925   Laminin-type module  
  0.00223   1244-1273   Laminin-type module  
ENSVPAP00000004185   0.0000000342   214-261   EGF-type module  
ENSVPAP00000004274   0.00000000234   1030-1069   EGF-type module  
ENSVPAP00000004284   0.0000000646   93-130   EGF-type module  
ENSVPAP00000004382   0.00000000000816   1494-1543   EGF-type module  
  0.000000000466   1170-1224   EGF-type module  
  0.00000000069   1860-1912   EGF-type module  
  0.000000001   1129-1179   EGF-type module  
  0.0000000191   1903-1944   EGF-type module  
  0.0000000383   2182-2238   EGF-type module  
  0.000000141   1049-1088   EGF-type module  
  0.000000296   1536-1579   EGF-type module  
  0.00000035   1699-1734   EGF-type module  
  0.000729   95-127   EGF-type module  
  0.0902   61-95   EGF-type module  
ENSVPAP00000004543   0.00000000023   675-717   EGF-type module  
  0.000000000729   519-561   EGF-type module  
ENSVPAP00000004594   0.000000000671   1075-1130   EGF-type module  
  0.00000000113   450-498   EGF-type module  
  0.00274   1451-1490   EGF-type module  
  0.0174   1122-1148   EGF-type module  
ENSVPAP00000004758   0.00000128   170-205   EGF-type module  
ENSVPAP00000004812   0.00000000502   630-680   Laminin-type module  
  0.0000000103   836-886   Laminin-type module  
  0.0000000865   784-833   Laminin-type module  
  0.000000558   736-778   Laminin-type module  
  0.000000614   683-733   Laminin-type module  
  0.00000165   889-931   Laminin-type module  
  0.0000017   564-616   Laminin-type module  
  0.0000026   991-1039   Laminin-type module  
  0.000419   940-984   Laminin-type module  
  0.000753   507-561   Laminin-type module  
ENSVPAP00000004847   0.0000000000182   488-526   EGF-type module  
  0.000000000287   412-455   EGF-type module  
  0.0000000985   3-43   EGF-type module  
  0.000000712   452-492   EGF-type module  
  0.00000651   296-327   EGF-type module  
ENSVPAP00000004935   0.00000022   93-133   Integrin beta EGF-like domains  
  0.00000067   451-489   Integrin beta EGF-like domains  
  0.000001   228-264   Integrin beta EGF-like domains  
  0.0000391   192-219   Integrin beta EGF-like domains  
  0.00279   58-91   Integrin beta EGF-like domains  
  0.00558   140-179   Integrin beta EGF-like domains  
ENSVPAP00000005041   0.00000000031   401-442   EGF-type module  
  0.0000000619   133-167   EGF-type module  
  0.000000384   361-403   EGF-type module  
  0.000000408   271-330   EGF-type module  
  0.000136   322-358   EGF-type module  
ENSVPAP00000005120   0.0000013   914-960   Laminin-type module  
ENSVPAP00000005184   0.0000208   558-583   EGF-type module  
  0.000204   591-617   EGF-type module  
  0.000461   723-759   EGF-type module  
  0.00235   524-551   Integrin beta EGF-like domains  
  0.0599   495-518   EGF-type module  
ENSVPAP00000005233   0.00000000293   317-361   EGF-type module  
ENSVPAP00000005253   0.0000000000984   285-333   Laminin-type module  
  0.0000000781   404-443   Laminin-type module  
ENSVPAP00000005398   0.000000234   19-56   EGF-type module  
ENSVPAP00000005455   0.000000681   132-169   EGF-type module  
  0.0000109   172-209   EGF-type module  
ENSVPAP00000005466   0.000000000167   889-936   EGF-type module  
  0.000000000838   587-634   EGF-type module  
  0.000000598   283-325   EGF-type module  
  0.00000542   1204-1257   EGF-type module  
ENSVPAP00000005502   0.0000244   131-168   EGF-type module  
ENSVPAP00000005507   0.00000152   298-339   Laminin-type module  
  0.00000624   21-56   EGF-type module  
  0.00000825   258-300   EGF-type module  
  0.0776   4-23   EGF-type module  
ENSVPAP00000005509   0.00000000105   40-78   EGF-type module  
  0.0000000014   112-153   EGF-type module  
  0.00000547   73-116   EGF-type module  
ENSVPAP00000005510   0.0000000000187   113-154   EGF-type module  
  0.00000000126   15-59   EGF-type module  
  0.0011   146-182   EGF-type module  
  0.00317   55-85   EGF-type module  
  0.0126   1-19   EGF-type module  
  0.023   87-117   EGF-type module  
ENSVPAP00000005552   0.000000000122   229-271   EGF-type module  
  0.000000001   149-189   EGF-type module  
  0.00000000108   266-303   EGF-type module  
  0.0000000101   190-228   EGF-type module  
  0.000012   112-149   EGF-type module  
  0.0000531   306-335   EGF-type module  
ENSVPAP00000005690   0.0000000129   91-124   EGF-type module  
ENSVPAP00000005747   0.0000000000124   117-160   EGF-type module  
  0.00000001   67-116   EGF-type module  
  0.0000742   222-269   EGF-type module  
  0.0076   1-27   EGF-type module  
ENSVPAP00000006044   0.00000779   1347-1376   EGF-type module  
  0.0000121   845-880   EGF-type module  
  0.000201   1300-1337   EGF-type module  
  0.0014   1266-1297   EGF-type module  
ENSVPAP00000006085   0.00000000000839   148-190   EGF-type module  
  0.000000000668   1140-1181   EGF-type module  
  0.00000000373   262-300   EGF-type module  
  0.00000163   893-944   EGF-type module  
  0.00000429   70-111   Laminin-type module  
  0.0000142   302-330   EGF-type module  
  0.00801   1261-1292   EGF-type module  
  0.0106   27-68   EGF-type module  
ENSVPAP00000006279   0.00000000000351   121-157   Cripto EGF-like domain-like  
  0.00000323   86-118   EGF-type module  
ENSVPAP00000006330   0.0000251   1557-1596   EGF-type module  
  0.00195   234-288   EGF-type module  
  0.0167   198-236   Merozoite surface protein 1 (MSP-1)  
ENSVPAP00000006579   0.0000000713   90-126   EGF-type module  
  0.000000187   130-174   EGF-type module  
ENSVPAP00000006586   0.0000000000117   112-150   Cripto EGF-like domain-like  
  0.00000629   78-109   EGF-type module  
ENSVPAP00000006623   0.0000000148   127-171   EGF-type module  
ENSVPAP00000006666   0.0000000000166   3000-3048   EGF-type module  
  0.00000000991   1304-1348   EGF-type module  
  0.0000000711   1333-1380   EGF-type module  
  0.00000088   2966-3012   EGF-type module  
  0.00000116   3860-3895   EGF-type module  
  0.0000106   4233-4265   EGF-type module  
  0.000132   3822-3861   EGF-type module  
  0.00156   930-990   EGF-type module  
  0.0023   2287-2331   EGF-type module  
ENSVPAP00000006739   0.0000000000278   179-227   EGF-type module  
ENSVPAP00000006872   0.0000000131   563-604   Integrin beta EGF-like domains  
  0.00446   537-560   Integrin beta EGF-like domains  
ENSVPAP00000006979   0.00000000000123   1543-1598   EGF-type module  
  0.0000000000103   488-540   EGF-type module  
  0.000000000061   530-579   EGF-type module  
  0.000000000113   1949-2002   EGF-type module  
  0.00000000113   2343-2386   EGF-type module  
  0.00000000225   1309-1348   EGF-type module  
  0.0000000173   571-614   EGF-type module  
  0.000000036   1785-1837   EGF-type module  
  0.0000000959   1915-1962   EGF-type module  
  0.000000666   1828-1864   EGF-type module  
  0.00000925   1150-1185   EGF-type module  
  0.00239   95-128   EGF-type module  
  0.0681   61-94   EGF-type module  
ENSVPAP00000007280   0.0000000229   543-584   Integrin beta EGF-like domains  
  0.000000642   502-540   Integrin beta EGF-like domains  
  0.0198   468-502   Integrin beta EGF-like domains  
ENSVPAP00000007306   0.00000326   213-259   EGF-type module  
ENSVPAP00000007406   0.00000176   1-38   EGF-type module  
ENSVPAP00000007597   0.000000116   73-118   EGF-type module  
  0.00000944   111-148   EGF-type module  
ENSVPAP00000007747   0.0000000000034   170-221   EGF-type module  
ENSVPAP00000007805   0.00000000000145   777-831   Laminin-type module  
  0.000000000198   833-881   Laminin-type module  
  0.000000000642   241-288   Laminin-type module  
  0.0000000134   678-729   Laminin-type module  
  0.000014   881-926   Laminin-type module  
  0.0000179   924-969   Laminin-type module  
  0.0977   642-680   Laminin-type module  
ENSVPAP00000008075   0.000000704   45-80   EGF-type module  
ENSVPAP00000008109   0.000000000151   312-365   Laminin-type module  
  0.0000000113   242-314   Laminin-type module  
  0.0000000151   375-431   Laminin-type module  
ENSVPAP00000008463   0.00000921   441-486   EGF-type module  
  0.0000161   620-653   EGF-type module  
  0.0000876   717-749   EGF-type module  
  0.00282   653-684   EGF-type module  
  0.0436   589-619   EGF-type module  
  0.0537   557-589   EGF-type module  
ENSVPAP00000008559   0.00000164   61-94   EGF-type module  
  0.0129   20-53   EGF-type module  
ENSVPAP00000008609   0.0000639   629-656   Integrin beta EGF-like domains  
  0.000479   598-622   EGF-type module  
  0.000479   695-720   Integrin beta EGF-like domains  
  0.000957   727-752   EGF-type module  
  0.00128   760-796   EGF-type module  
  0.0016   563-590   Integrin beta EGF-like domains  
  0.0367   533-557   EGF-type module  
ENSVPAP00000008753   0.0000000373   366-406   EGF-type module  
  0.0000173   284-338   EGF-type module  
  0.021   416-458   EGF-type module  
ENSVPAP00000009000   0.00000000109   746-794   Laminin-type module  
  0.00000000335   853-903   Laminin-type module  
  0.00000000419   792-844   Laminin-type module  
  0.00000000419   901-951   Laminin-type module  
  0.0000000314   437-476   Laminin-type module  
  0.000000614   198-251   Laminin-type module  
  0.0000398   953-1012   Laminin-type module  
ENSVPAP00000009003   0.00000000000141   5-50   EGF-type module  
ENSVPAP00000009046   0.000000438   134-182   EGF-type module  
ENSVPAP00000009164   0.0000000118   845-898   EGF-type module  
  0.0000299   890-928   EGF-type module  
  0.023   945-975   EGF-type module  
ENSVPAP00000009252   0.00000137   327-367   EGF-type module  
  0.0255   298-335   EGF-type module  
ENSVPAP00000009371   0.00000617   416-452   EGF-type module  
ENSVPAP00000009590   0.0000000000289   1162-1202   EGF-type module  
  0.000000000123   1199-1237   EGF-type module  
  0.000000034   1013-1050   EGF-type module  
  0.000000409   1560-1602   EGF-type module  
  0.000204   3178-3214   EGF-type module  
  0.000245   3217-3246   EGF-type module  
  0.00149   3246-3277   EGF-type module  
ENSVPAP00000009685   0.0000000149   319-377   Laminin-type module  
  0.000223   428-455   EGF-type module  
  0.000586   375-422   Laminin-type module  
ENSVPAP00000010116   0.000000000301   516-558   EGF-type module  
  0.000000000547   662-702   EGF-type module  
ENSVPAP00000011010   0.000000000394   1221-1267   EGF-type module  
  0.000343   1525-1562   EGF-type module  
  0.000599   289-327   EGF-type module  
ENSVPAP00000011038   0.0000000001   5379-5433   EGF-type module  
  0.00000000948   5263-5308   EGF-type module  
  0.0000142   5097-5148   EGF-type module  
  0.00101   5421-5461   EGF-type module  
ENSVPAP00000011235   0.00000000366   915-956   EGF-type module  
  0.0000035   958-994   EGF-type module  
  0.000141   1419-1448   EGF-type module  
  0.000537   1372-1409   EGF-type module  
  0.0363   1352-1371   EGF-type module  
ENSVPAP00000011237   0.000000000865   76-124   Laminin-type module  
  0.00000000251   122-177   Laminin-type module  
  0.0000000614   17-69   Laminin-type module  
ENSVPAP00000011261   0.0000000223   423-464   EGF-type module  
  0.00000209   585-627   EGF-type module  
  0.00157   385-442   EGF-type module  
ENSVPAP00000011383   0.00000903   4381-4421   EGF-type module  
  0.0000251   2137-2186   EGF-type module  
  0.0000878   1522-1570   EGF-type module  
  0.00014   4281-4315   EGF-type module  
  0.00019   4245-4279   EGF-type module  
  0.000318   483-521   EGF-type module  
  0.000348   4208-4244   EGF-type module  
ENSVPAP00000011474   0.0000000035   4118-4155   EGF-type module  
  0.0000000157   4083-4122   EGF-type module  
  0.000000144   4044-4080   EGF-type module  
  0.00000303   4005-4047   EGF-type module  
ENSVPAP00000011619   0.000000000184   348-400   Laminin-type module  
  0.000000000391   880-932   Laminin-type module  
  0.00000000254   834-882   Laminin-type module  
  0.00000000963   284-350   Laminin-type module  
  0.0000000243   523-564   Laminin-type module  
  0.0000000614   471-515   Laminin-type module  
  0.00000363   432-473   Laminin-type module  
ENSVPAP00000011626   0.000000000134   326-378   Laminin-type module  
  0.000000126   1067-1117   Laminin-type module  
  0.000000558   416-454   Laminin-type module  
  0.0000131   452-505   Laminin-type module  
  0.000067   1010-1069   Laminin-type module  
  0.0000725   260-314   Laminin-type module  
  0.000181   763-805   Laminin-type module  
  0.000893   1115-1153   Laminin-type module  
  0.00268   811-855   Laminin-type module  
  0.00419   853-886   Laminin-type module  
ENSVPAP00000011687   0.0000000753   202-250   Laminin-type module  
  0.000000151   301-346   Laminin-type module  
  0.000000268   105-146   Laminin-type module  
  0.000000921   155-204   Laminin-type module  
  0.00452   268-303   Laminin-type module  
 
Weak hits:
ENSVPAP00000000391   0.000854   676-701   EGF-type module  
  0.0301   810-848   EGF-type module  
ENSVPAP00000000539   0.000116   1050-1085   EGF-type module  
ENSVPAP00000000605   0.00151   119-153   Cripto EGF-like domain-like  
ENSVPAP00000002039   0.000429   619-643   EGF-type module  
  0.00045   715-740   EGF-type module  
  0.000481   685-709   Integrin beta EGF-like domains  
  0.00188   551-578   Integrin beta EGF-like domains  
  0.0023   742-780   EGF-type module  
  0.00429   586-610   Integrin beta EGF-like domains  
  0.00796   521-545   EGF-type module  
ENSVPAP00000002347   0.0212   450-487   EGF-type module  
ENSVPAP00000002788   0.0325   431-447   EGF-type module  
ENSVPAP00000003085   0.000134   545-576   EGF-type module  
ENSVPAP00000003251   0.00174   129-160   EGF-type module  
ENSVPAP00000003450   0.000716   521-556   EGF-type module  
ENSVPAP00000003502   0.0837   9-32   Follistatin (FS) module N-terminal domain, FS-N  
ENSVPAP00000003625   0.000782   224-257   EGF-type module  
ENSVPAP00000003950   0.000295   263-295   EGF-type module  
  0.000311   232-262   EGF-type module  
  0.000949   200-230   EGF-type module  
  0.00745   296-329   EGF-type module  
  0.0236   170-197   EGF-type module  
ENSVPAP00000004390   0.00652   337-356   EGF-type module  
ENSVPAP00000004724   0.000511   102-138   Cripto EGF-like domain-like  
ENSVPAP00000004727   0.000277   175-212   EGF-type module  
ENSVPAP00000005025   0.000141   312-353   EGF-type module  
ENSVPAP00000005200   0.00986   546-587   EGF-type module  
ENSVPAP00000005395   0.000692   215-243   EGF-type module  
ENSVPAP00000005508   0.0723   13-40   EGF-type module  
ENSVPAP00000006281   0.00195   492-515   EGF-type module  
  0.00209   461-484   EGF-type module  
  0.00349   399-422   Integrin beta EGF-like domains  
  0.00642   336-361   EGF-type module  
  0.00907   213-237   EGF-type module  
  0.00963   585-608   EGF-type module  
  0.0113   523-546   EGF-type module  
  0.0181   246-269   EGF-type module  
  0.0181   275-299   EGF-type module  
  0.0209   182-205   EGF-type module  
  0.0265   307-330   EGF-type module  
  0.0279   430-453   EGF-type module  
  0.0307   554-577   EGF-type module  
ENSVPAP00000006608   0.00132   40-71   EGF-type module  
ENSVPAP00000008094   0.00121   208-232   Integrin beta EGF-like domains  
  0.00385   270-294   Integrin beta EGF-like domains  
  0.0062   239-262   EGF-type module  
ENSVPAP00000008304   0.00195   2439-2464   Integrin beta EGF-like domains  
  0.0106   635-660   EGF-type module  
  0.0558   2815-2839   EGF-type module  
ENSVPAP00000009077   0.00111   364-411   Laminin-type module  
  0.0123   538-583   Laminin-type module  
  0.019   797-826   EGF-type module  
  0.0272   501-540   Laminin-type module  
  0.0368   750-799   EGF-type module  
  0.046   144-193   Laminin-type module  
ENSVPAP00000009251   0.00014   49-85   EGF-type module  
ENSVPAP00000009276   0.00112   499-539   EGF-type module  
ENSVPAP00000010658   0.00144   838-886   EGF-like domain of nidogen-1  
  0.0156   477-513   EGF-like domain of nidogen-1  
ENSVPAP00000010845   0.0123   27-53   EGF-type module  
ENSVPAP00000010873   0.0712   234-270   EGF-type module  
ENSVPAP00000011361   0.0112   51-76   Integrin beta EGF-like domains  
ENSVPAP00000011372   0.0161   1056-1098   EGF-type module  

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View all assignments containing a EGF/Laminin domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   719145 719145
No Yes Homo sapiens 76_38 Human 1736 621
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 532 163
No Yes Gorilla gorilla 76_3.1 Western gorilla 876 233
No Yes Pongo abelii 76_2 Sumatran orangutan 539 174
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 555 171
No Yes Papio anubis 76 Olive baboon 634 191
No Yes Macaca mulatta 76_1 Rhesus monkey 925 318
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1183 386
No Yes Otolemur garnettii 76_3 Small-eared galago 551 171
No Yes Microcebus murinus 76_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 76_5.0 Norway rat 613 207
No Yes Mus musculus 76_38 House mouse 1015 344
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 515 145
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 529 164
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 521 161
No Yes Cavia porcellus 76_3 Domestic guinea pig 580 173
No Yes Oryctolagus cuniculus 76_2 Rabbit 478 160
No Yes Ochotona princeps 76 American pika 469 142
No Yes Tupaia belangeri 76 Northern tree shrew 407 132
No Yes Sus scrofa 76_10.2 Pig 585 211
No Yes Bos taurus 76_3.1 Cattle 632 189
No Yes Ovis aries 76_3.1 Sheep 602 193
No Yes Vicugna pacos 76_1 Alpaca 260 102
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 76_1.0 Domestic ferret 583 186
No Yes Ailuropoda melanoleuca 76_1 Giant panda 634 192
No Yes Canis familiaris 76_3.1 Dog 761 226
No Yes Felis catus 76_6.2 Domestic cat 592 185
No Yes Equus caballus 76_2 Horse 806 230
No Yes Myotis lucifugus 76_2.0 Little brown bat 502 169
No Yes Pteropus vampyrus 76_1 Large flying fox 529 164
No Yes Sorex araneus 76_1 European shrew 286 102
No Yes Erinaceus europaeus 76 Western European hedgehog 383 118
No Yes Procavia capensis 76_1 Cape rock hyrax 460 149
No Yes Loxodonta africana 76_3 African savanna elephant 690 216
No Yes Echinops telfairi 76 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 616 199
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 271 99
No Yes Macropus eugenii 76_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 621 199
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 616 176
No Yes Ornithorhynchus anatinus 76_5 Platypus 511 184
No Yes Saccoglossus kowalevskii v3.0   3261 466
No Yes Petromyzon marinus 76_7.0 Sea lamprey 221 94
No Yes Meleagris gallopavo 76_2 Turkey 509 175
No Yes Gallus gallus 76_4 Chicken 523 155
No Yes Anas platyrhynchos 76_1.0 Mallard 519 172
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 513 170
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 533 157
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 592 196
No Yes Anolis carolinensis 76_2.0 Green anole 539 160
No Yes Xenopus laevis African clawed frog 514 207
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 694 186
No Yes Latimeria chalumnae 76_1 Coelacanth 738 218
No Yes Lepisosteus oculatus 76 Spotted gar 888 241
No Yes Gadus morhua 76_1 Atlantic cod 618 198
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 995 299
No Yes Takifugu rubripes 76_4 Torafugu 2323 723
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 771 242
No Yes Oryzias latipes 76_1 Japanese medaka 740 228
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 627 196
No Yes Poecilia formosa 76 Amazon molly 687 203
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1051 282
No Yes Astyanax mexicanus 76 Mexican tetra 752 239
No Yes Danio rerio 76_9 Zebrafish 1139 389
No Yes Oikopleura dioica   459 149
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1671 332
No Yes Ciona intestinalis 76 Vase tunicate 438 155
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 2661 612
No Yes Adineta vaga   1146 278
No Yes Octopus bimaculoides 280   748 217
No Yes Crassostrea gigas 22 Pacific oyster 874 287
No Yes Lottia gigantea Owl limpet 627 164
No Yes Helobdella robusta   407 130
No Yes Capitella sp. I   916 309
No Yes Danaus plexippus OGS1.0 Monarch butterfly 197 52
No Yes Heliconius melpomene Postman butterfly 184 46
No Yes Bombyx mori Domestic silkworm 149 65
No Yes Nasonia vitripennis Jewel wasp 168 39
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 745 159
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 213 49
No Yes Linepithema humile v1.1 Argentine ant 160 66
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 182 59
No Yes Solenopsis invicta v.2.2.3 Red fire ant 111 54
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 220 46
No Yes Atta cephalotes v1.1   189 65
No Yes Camponotus floridanus v3.3 Florida carpenter ant 206 46
No Yes Lucilia cuprina Australian sheep blowfly 189 47
No Yes Drosophila grimshawi 1.3   235 55
No Yes Drosophila willistoni 1.3   203 47
No Yes Drosophila pseudoobscura 2.13   219 52
No Yes Drosophila persimilis 1.3   189 52
No Yes Drosophila suzukii   233 53
No Yes Drosophila yakuba 1.3   214 47
No Yes Drosophila simulans 1.3   145 43
No Yes Drosophila sechellia 1.3   187 41
No Yes Drosophila melanogaster 76_5 Fruit fly 696 152
No Yes Drosophila erecta 1.3   215 44
No Yes Drosophila ananassae 1.3   210 48
No Yes Drosophila virilis 1.2   216 49
No Yes Drosophila mojavensis 1.3   212 46
No Yes Megaselia scalaris 22   77 32
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 222 54
No Yes Culex pipiens quinquefasciatus Southern house mosquito 204 55
No Yes Anopheles darlingi 22 American malaria mosquito 125 29
No Yes Anopheles gambiae 49_3j African malaria mosquito 196 51
No Yes Tribolium castaneum 3.0 Red flour beetle 229 58
No Yes Pediculus humanus corporis (Early assembly) Human body louse 220 55
No Yes Acyrthosiphon pisum Pea aphid 185 35
No Yes Rhodnius prolixus 22   183 44
No Yes Daphnia pulex Common water flea 256 74
No Yes Strigamia maritima 22   230 60
No Yes Sarcoptes scabiei   166 48
No Yes Tetranychus urticae Two-spotted spider mite 224 64
No Yes Ixodes scapularis (Preliminary) Black-legged tick 156 55
No Yes Pristionchus pacificus   229 96
No Yes Meloidogyne incognita Southern root-knot nematode 119 42
No Yes Meloidogyne hapla   76 37
No Yes Onchocerca volvulus 22   185 53
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 433 107
No Yes Caenorhabditis japonica   193 64
No Yes Caenorhabditis brenneri   302 105
No Yes Caenorhabditis remanei   276 100
No Yes Caenorhabditis elegans 76_235 Roundworm 528 152
No Yes Caenorhabditis briggsae 2   242 82
No Yes Trichinella spiralis 22   313 92
No Yes Hymenolepis microstoma   122 36
No Yes Echinococcus multilocularis   133 38
No Yes Echinococcus granulosus   126 38
No Yes Taenia solium Pork tapeworm 127 41
No Yes Schistosoma mansoni   123 45
No Yes Mnemiopsis leidyi Sea walnut 178 50
No Yes Thelohanellus kitauei   26 25
No Yes Acropora digitifera v1.0   831 347
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1039 372
No Yes Hydra vulgaris   350 115
No Yes Amphimedon queenslandica   433 151
No Yes Trichoplax adhaerens   574 125
No Yes Proterospongia sp. ATCC 50818   129 59
No Yes Monosiga brevicollis   53 30
No Yes Sphaeroforma arctica JP610   120 34
No Yes Capsaspora owczarzaki ATCC 30864   28 22
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   19 9
No Yes Dictyostelium purpureum   9 6
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 17 17
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   17 17
No Yes Citrus clementina v165   4 4
No Yes Citrus sinensis v154 Sweet orange 10 10
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 11 11
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 18 18
No Yes Phaseolus vulgaris v186 French bean 8 8
No Yes Glycine max v109 Soybean 12 12
No Yes Cucumis sativus v122 Cucumber 6 5
No Yes Fragaria vesca Wild strawberry 15 13
No Yes Malus domestica v196 Apple 25 25
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Populus trichocarpa v156 Black cottonwood 10 10
No Yes Vitis vinifera Wine grape 19 12
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 6 6
No Yes Solanum tuberosum Potato 20 20
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   14 14
No Yes Triticum urartu 22   42 42
No Yes Triticum aestivum 22 Bread wheat 122 122
No Yes Aegilops tauschii 22   64 64
No Yes Brachypodium distachyon Stiff brome 26 25
No Yes Oryza barthii 22 African wild rice 59 49
No Yes Oryza meridionalis 22   53 44
No Yes Oryza glumaepatula 22   66 64
No Yes Oryza glaberrima African rice 31 31
No Yes Oryza punctata 22   44 41
No Yes Oryza nivara 22   56 52
No Yes Oryza brachyantha 22 Malo sina 38 38
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 50 49
No Yes Oryza sativa v193 Rice 51 50
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 16 16
No Yes Panicum virgatum v202 Switchgrass 77 76
No Yes Setaria italica v164 Foxtail millet 40 40
No Yes Zea mays subsp. mays Maize 18 17
No Yes Zea mays v181 Maize 20 19
No Yes Sorghum bicolor Sorghum 26 26
No Yes Musa balbisiana Balbis banana 14 13
No Yes Musa acuminata 22 Wild Malaysian banana 29 26
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   7 6
No Yes Chlorella vulgaris   5 5
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus lucimarinus CCE9901   4 4
No Yes Ostreococcus tauri   2 2
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   3 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   18 12
No Yes Giardia lamblia 2.3   26 14
No Yes Cyanophora paradoxa   4 4
No Yes Ectocarpus siliculosus   10 9
No Yes Albugo laibachii 22   3 3
No Yes Pythium iwayamai DAOM BR242034 22   4 4
No Yes Pythium arrhenomanes ATCC 12531 22   7 6
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   5 4
No Yes Pythium irregulare DAOM BR486 22   2 2
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   6 4
No Yes Fragilariopsis cylindrus   14 10
No Yes Thalassiosira pseudonana CCMP1335   6 4
No Yes Perkinsus marinus ATCC 50983   3 3
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   7 6
No Yes Cryptosporidium muris   13 7
No Yes Cryptosporidium parvum Iowa II   12 7
No Yes Neospora caninum   12 7
No Yes Toxoplasma gondii VEG   12 6
No Yes Toxoplasma gondii ME49   14 8
No Yes Toxoplasma gondii GT1   8 5
No Yes Babesia bovis T2Bo   4 2
No Yes Theileria parva   1 1
No Yes Plasmodium falciparum 3D7   10 7
No Yes Plasmodium vivax SaI-1 7.0   12 8
No Yes Plasmodium knowlesi strain H   13 9
No Yes Plasmodium yoelii ssp. yoelii 1   8 5
No Yes Plasmodium chabaudi   9 6
No Yes Plasmodium berghei ANKA   10 6
No Yes Symbiodinium minutum clade B1 v1.2   10 7
No Yes Naegleria gruberi   15 13
No Yes Guillardia theta CCMP2712 v1.0   24 18
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Odoribacter splanchnicus DSM 20712   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 774 252
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 393 99
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 218 56
No Yes Ascaris suum Victoria/Ghent Pig roundworm 227 76
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 360 114
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 6 6
No Yes Hordeum vulgare 22 Domesticated barley 56 56
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 42 42
No Yes Neospora caninum Nc-Liverpool 6.2   12 7
No Yes Plasmodium falciparum HB3   9 6
No Yes Plasmodium falciparum Dd2   6 4
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 1814 677
No Yes Homo sapiens (NCBI version) Human 877 288
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 556 169
No Yes Heliconius numata (Incomplete)   14 9
No Yes Loa loa v3.3 (Request) Eye worm 185 61
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 186 80
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 169 51
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 25
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 6
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 6
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 710 195
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 517 157
No Yes Gorilla gorilla 69_3.1 Western gorilla 571 161
No Yes Pongo abelii 69_2 Sumatran orangutan 519 168
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 495 156
No Yes Macaca mulatta 69_1 Rhesus monkey 556 172
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 578 165
No Yes Otolemur garnettii 69_3 Small-eared galago 549 170
No Yes Microcebus murinus 69_1 Gray mouse lemur 455 139
No Yes Rattus norvegicus 69_3.4 Norway rat 574 173
No Yes Mus musculus 69_38 House mouse 554 169
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 513 143
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 502 156
No Yes Cavia porcellus 69_3 Domestic guinea pig 558 163
No Yes Oryctolagus cuniculus 69_2 Rabbit 463 150
No Yes Ochotona princeps 69 American pika 469 142
No Yes Tupaia belangeri 69 Northern tree shrew 407 132
No Yes Sus scrofa 69_10.2 Pig 467 164
No Yes Bos taurus 69_3.1 Cattle 558 165
No Yes Vicugna pacos 69_1 Alpaca 260 102
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 526 156
No Yes Mustela putorius furo 69_1.0 Domestic ferret 565 183
No Yes Ailuropoda melanoleuca 69_1 Giant panda 551 166
No Yes Canis familiaris 69_3.1 Dog 552 165
No Yes Felis catus 69 Domestic cat 380 133
No Yes Equus caballus 69_2 Horse 546 178
No Yes Myotis lucifugus 69_2.0 Little brown bat 472 160
No Yes Pteropus vampyrus 69_1 Large flying fox 525 162
No Yes Sorex araneus 69_1 European shrew 286 102
No Yes Erinaceus europaeus 69 Western European hedgehog 383 118
No Yes Procavia capensis 69_1 Cape rock hyrax 458 148
No Yes Loxodonta africana 69_3 African savanna elephant 526 165
No Yes Echinops telfairi 69 Small Madagascar hedgehog 391 135
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 322 125
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 267 97
No Yes Macropus eugenii 69_1.0 Tammar wallaby 454 139
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 491 158
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 567 166
No Yes Ornithorhynchus anatinus 69_5 Platypus 452 168
No Yes Petromyzon marinus 69_7.0 Sea lamprey 203 84
No Yes Meleagris gallopavo 69_2 Turkey 471 152
No Yes Gallus gallus 69_2 Chicken 516 150
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 494 162
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 497 161
No Yes Anolis carolinensis 69_2.0 Green anole 510 157
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 553 156
No Yes Latimeria chalumnae 69_1 Coelacanth 639 183
No Yes Gadus morhua 69_1 Atlantic cod 547 170
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 693 221
No Yes Takifugu rubripes 69_4 Torafugu 677 202
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 659 191
No Yes Oryzias latipes 69_1 Japanese medaka 656 187
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 627 196
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 749 202
No Yes Danio rerio 69_9 Zebrafish 769 240
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 523 112
No Yes Ciona intestinalis 69 Vase tunicate 408 143
No Yes Drosophila melanogaster 69_5 Fruit fly 218 50
No Yes Caenorhabditis elegans 69_215 Roundworm 241 74
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   302166 90591
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   242 149
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   13 7
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   6 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 3
No Yes STRING v9.0.5 (STRING)   25827 7909
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   2 1
No Yes Uniprot 2018_03 genome   214533 69342
No Yes Global Ocean Sampling Expedition (GOS)   425 226
No Yes NCBI viral sequences (Viral)   27 26
No Yes PDB chains (SCOP 1.75) (PDB)   117 88
No Yes Protein Data Bank (all PDB sequenc)   1179 857
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2437 2434
No Yes TargetDB (Targets)   486 191
No Yes UniProt viral sequences (Viral)   82 69

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