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LDL receptor-like module superfamily domain assignments
in
Anas platyrhynchos 76_1.0

Assignment details

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Anas platyrhynchos 76_1.0 has 185 significant domains in 45 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSAPLP00000000153   0.0000072   468-500   LDL receptor-like module  
  0.0000275   434-466   LDL receptor-like module  
ENSAPLP00000000275   0.000000000017   447-485   LDL receptor-like module  
  0.00000000589   163-199   LDL receptor-like module  
  0.000000117   408-446   LDL receptor-like module  
  0.000000314   209-251   LDL receptor-like module  
  0.000000942   371-408   LDL receptor-like module  
ENSAPLP00000001298   0.00000000157   7-40   LDL receptor-like module  
ENSAPLP00000001998   0.000000209   49-84   LDL receptor-like module  
  0.00000223   95-127   LDL receptor-like module  
  0.0114   134-175   LDL receptor-like module  
ENSAPLP00000002715   0.0000000000319   466-512   LDL receptor-like module  
  0.000000017   541-580   LDL receptor-like module  
  0.000129   500-537   LDL receptor-like module  
ENSAPLP00000004826   0.00000000982   37-69   LDL receptor-like module  
  0.0000000759   3-33   LDL receptor-like module  
ENSAPLP00000005084   0.000000000223   426-461   LDL receptor-like module  
  0.00000000089   461-497   LDL receptor-like module  
  0.00000000223   497-531   LDL receptor-like module  
  0.00000154   537-576   LDL receptor-like module  
ENSAPLP00000005829   0.0000000038   25-63   LDL receptor-like module  
ENSAPLP00000007230   0.000000000196   691-727   LDL receptor-like module  
  0.0000000825   230-267   LDL receptor-like module  
ENSAPLP00000007313   0.00000000000419   2728-2770   LDL receptor-like module  
  0.0000000000183   1058-1095   LDL receptor-like module  
  0.0000000000262   17-58   LDL receptor-like module  
  0.000000000038   1099-1137   LDL receptor-like module  
  0.0000000000406   98-139   LDL receptor-like module  
  0.0000000000576   1258-1299   LDL receptor-like module  
  0.000000000157   2851-2890   LDL receptor-like module  
  0.00000000017   3621-3661   LDL receptor-like module  
  0.000000000196   1015-1053   LDL receptor-like module  
  0.00000000034   2896-2933   LDL receptor-like module  
  0.000000000367   2980-3022   LDL receptor-like module  
  0.000000000484   3919-3957   LDL receptor-like module  
  0.000000000668   3020-3062   LDL receptor-like module  
  0.000000000995   213-252   LDL receptor-like module  
  0.00000000144   2692-2730   LDL receptor-like module  
  0.00000000144   3504-3540   LDL receptor-like module  
  0.00000000157   3580-3624   LDL receptor-like module  
  0.00000000183   3791-3829   LDL receptor-like module  
  0.00000000196   1222-1257   LDL receptor-like module  
  0.00000000209   3713-3748   LDL receptor-like module  
  0.00000000288   3064-3103   LDL receptor-like module  
  0.00000000314   178-214   LDL receptor-like module  
  0.00000000314   1139-1177   LDL receptor-like module  
  0.00000000956   61-97   LDL receptor-like module  
  0.0000000105   1178-1216   LDL receptor-like module  
  0.0000000144   3541-3583   LDL receptor-like module  
  0.0000000144   3834-3870   LDL receptor-like module  
  0.0000000196   2807-2853   LDL receptor-like module  
  0.0000000301   3747-3787   LDL receptor-like module  
  0.000000123   2937-2981   LDL receptor-like module  
  0.00000017   142-176   LDL receptor-like module  
  0.000000353   3670-3710   LDL receptor-like module  
  0.000000668   3877-3914   LDL receptor-like module  
  0.00000102   1303-1339   LDL receptor-like module  
  0.00000127   2776-2812   LDL receptor-like module  
ENSAPLP00000007601   0.00000000000511   139-177   LDL receptor-like module  
  0.0000000000236   419-457   LDL receptor-like module  
  0.0000000288   184-225   LDL receptor-like module  
  0.00000106   380-417   LDL receptor-like module  
  0.00000615   342-379   LDL receptor-like module  
ENSAPLP00000007725   0.000000484   134-167   LDL receptor-like module  
ENSAPLP00000007745   0.000000412   89-130   LDL receptor-like module  
ENSAPLP00000007968   0.00000000000157   3-40   LDL receptor-like module  
  0.000000000589   42-79   LDL receptor-like module  
ENSAPLP00000007976   0.000000000419   1310-1346   LDL receptor-like module  
  0.00000000144   1272-1308   LDL receptor-like module  
  0.0000000034   1231-1271   LDL receptor-like module  
ENSAPLP00000008135   0.0000000000275   77-116   LDL receptor-like module  
  0.0000000000288   36-78   LDL receptor-like module  
  0.0000000000301   121-159   LDL receptor-like module  
  0.0000000000314   161-199   LDL receptor-like module  
  0.000000000275   1-37   LDL receptor-like module  
  0.000000000419   207-243   LDL receptor-like module  
  0.0000000314   254-286   LDL receptor-like module  
  0.0000000537   289-325   LDL receptor-like module  
ENSAPLP00000008307   0.0000000157   92-130   LDL receptor-like module  
ENSAPLP00000008678   0.0000157   105-137   LDL receptor-like module  
ENSAPLP00000008798   0.0000278   80-121   LDL receptor-like module  
ENSAPLP00000009540   0.0000000157   146-182   LDL receptor-like module  
ENSAPLP00000009543   0.0000000236   294-330   LDL receptor-like module  
ENSAPLP00000009586   0.0000000000223   248-288   LDL receptor-like module  
  0.000000000126   293-329   LDL receptor-like module  
  0.000000000131   212-250   LDL receptor-like module  
  0.000000000196   127-167   LDL receptor-like module  
  0.000000000445   50-89   LDL receptor-like module  
  0.00000000393   171-209   LDL receptor-like module  
  0.00000000537   88-126   LDL receptor-like module  
  0.0000017   10-52   LDL receptor-like module  
ENSAPLP00000009631   0.00000017   141-175   LDL receptor-like module  
ENSAPLP00000009646   0.000000000694   53-90   LDL receptor-like module  
ENSAPLP00000010099   0.0000000000131   84-121   LDL receptor-like module  
  0.0000000000209   167-205   LDL receptor-like module  
  0.0000000000445   203-244   LDL receptor-like module  
  0.000000000105   119-156   LDL receptor-like module  
  0.000000000327   3-40   LDL receptor-like module  
  0.00000000746   38-81   LDL receptor-like module  
ENSAPLP00000010533   0.000000000942   214-251   LDL receptor-like module  
  0.0000000105   253-294   LDL receptor-like module  
ENSAPLP00000010626   0.000000000903   631-672   LDL receptor-like module  
  0.00000000772   556-593   LDL receptor-like module  
  0.00000000825   286-323   LDL receptor-like module  
  0.0000000131   322-360   LDL receptor-like module  
  0.0000000131   359-394   LDL receptor-like module  
  0.0000000196   252-286   LDL receptor-like module  
  0.00000113   597-629   LDL receptor-like module  
ENSAPLP00000011241   0.000000432   128-169   LDL receptor-like module  
ENSAPLP00000011294   0.000000458   55-92   LDL receptor-like module  
ENSAPLP00000011743   0.000000000196   36-76   LDL receptor-like module  
  0.00000000301   157-198   LDL receptor-like module  
  0.000000118   1-38   LDL receptor-like module  
  0.000000432   77-112   LDL receptor-like module  
  0.00000128   201-236   LDL receptor-like module  
ENSAPLP00000011745   0.000000000275   65-104   LDL receptor-like module  
  0.00000000864   1-30   LDL receptor-like module  
  0.0000000103   150-189   LDL receptor-like module  
  0.0000000124   193-229   LDL receptor-like module  
  0.0000000851   233-267   LDL receptor-like module  
  0.000000157   106-141   LDL receptor-like module  
  0.000000497   29-66   LDL receptor-like module  
ENSAPLP00000011898   0.0000563   128-152   LDL receptor-like module  
ENSAPLP00000012018   0.000000000969   1333-1371   LDL receptor-like module  
  0.00000000209   1254-1294   LDL receptor-like module  
  0.00000000406   1295-1331   LDL receptor-like module  
ENSAPLP00000012833   0.00000838   11-45   LDL receptor-like module  
ENSAPLP00000013154   0.0000000000563   15-51   LDL receptor-like module  
  0.000000000288   96-133   LDL receptor-like module  
  0.000000000615   56-93   LDL receptor-like module  
ENSAPLP00000013167   0.0000000000038   1322-1361   LDL receptor-like module  
  0.0000000000367   1229-1266   LDL receptor-like module  
  0.0000000000471   1059-1100   LDL receptor-like module  
  0.000000000196   1103-1139   LDL receptor-like module  
  0.000000000524   1276-1310   LDL receptor-like module  
  0.00000000117   982-1020   LDL receptor-like module  
  0.00000000524   1145-1178   LDL receptor-like module  
  0.0000000367   1377-1414   LDL receptor-like module  
  0.0000000524   1023-1061   LDL receptor-like module  
  0.00000223   1420-1455   LDL receptor-like module  
  0.00000314   1181-1217   LDL receptor-like module  
ENSAPLP00000013454   0.00000000353   170-207   LDL receptor-like module  
ENSAPLP00000014089   0.00000034   23-60   LDL receptor-like module  
ENSAPLP00000015337   0.0000000000654   840-880   LDL receptor-like module  
  0.00000000012   3557-3597   LDL receptor-like module  
  0.000000000131   1006-1044   LDL receptor-like module  
  0.000000000196   3641-3686   LDL receptor-like module  
  0.000000000301   881-923   LDL receptor-like module  
  0.00000000034   3475-3515   LDL receptor-like module  
  0.000000000367   922-960   LDL receptor-like module  
  0.000000000393   3357-3397   LDL receptor-like module  
  0.000000000432   3599-3635   LDL receptor-like module  
  0.000000000471   966-1003   LDL receptor-like module  
  0.000000000654   2687-2723   LDL receptor-like module  
  0.000000000851   3519-3558   LDL receptor-like module  
  0.00000000111   2552-2593   LDL receptor-like module  
  0.00000000114   2726-2761   LDL receptor-like module  
  0.00000000209   23-62   LDL receptor-like module  
  0.00000000327   2808-2844   LDL receptor-like module  
  0.00000000393   3439-3474   LDL receptor-like module  
  0.00000000406   2765-2800   LDL receptor-like module  
  0.00000000825   2592-2633   LDL receptor-like module  
  0.0000000102   3399-3437   LDL receptor-like module  
  0.0000000236   3320-3354   LDL receptor-like module  
  0.0000000445   3732-3765   LDL receptor-like module  
  0.000000131   1136-1171   LDL receptor-like module  
  0.000000223   2649-2681   LDL receptor-like module  
  0.000000353   1049-1090   LDL receptor-like module  
  0.000000393   71-106   LDL receptor-like module  
  0.000000471   2516-2554   LDL receptor-like module  
  0.000000733   1099-1133   LDL receptor-like module  
  0.0000236   2846-2880   LDL receptor-like module  
  0.0000367   3683-3719   LDL receptor-like module  
ENSAPLP00000015438   0.0000000000017   234-273   LDL receptor-like module  
  0.0000000000128   32-68   LDL receptor-like module  
  0.0000000000183   148-188   LDL receptor-like module  
  0.000000000122   272-312   LDL receptor-like module  
  0.000000000123   188-225   LDL receptor-like module  
  0.000000000563   70-108   LDL receptor-like module  
  0.0000000034   107-149   LDL receptor-like module  
  0.0000000353   317-354   LDL receptor-like module  
ENSAPLP00000015798   0.0000000000249   23-66   LDL receptor-like module  
ENSAPLP00000015933   0.0000000183   459-501   LDL receptor-like module  
  0.000000654   234-271   LDL receptor-like module  
ENSAPLP00000016039   0.00000000393   315-352   LDL receptor-like module  
ENSAPLP00000016066   0.000000249   105-141   LDL receptor-like module  
ENSAPLP00000016256   0.0000000825   1-37   LDL receptor-like module  
 
Weak hits:
ENSAPLP00000011775   0.0196   57-86   LDL receptor-like module  

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Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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