SUPERFAMILY 1.75 HMM library and genome assignments server

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LDL receptor-like module superfamily domain assignments
in
Strongylocentrotus purpuratus v3.1

Assignment details

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Strongylocentrotus purpuratus v3.1 has 601 significant domains in 193 proteins.

     

Sequence ID   Evalue   Region   Family  
SPU_000002   0.00000144   150-183   LDL receptor-like module  
  0.00000628   186-224   LDL receptor-like module  
SPU_000437   0.00000000223   572-612   LDL receptor-like module  
  0.00000000262   777-815   LDL receptor-like module  
  0.00000000707   693-733   LDL receptor-like module  
  0.00000000733   856-899   LDL receptor-like module  
  0.0000000196   523-568   LDL receptor-like module  
  0.0000000628   736-773   LDL receptor-like module  
  0.000000103   657-692   LDL receptor-like module  
  0.000000105   447-483   LDL receptor-like module  
  0.000000654   488-527   LDL receptor-like module  
  0.0000012   609-653   LDL receptor-like module  
  0.000157   826-860   LDL receptor-like module  
SPU_000620   0.000000484   269-305   LDL receptor-like module  
  0.00000131   308-346   LDL receptor-like module  
SPU_000621   0.000000000123   178-215   LDL receptor-like module  
  0.00000000034   256-294   LDL receptor-like module  
  0.000000000628   54-91   LDL receptor-like module  
  0.00000000746   137-173   LDL receptor-like module  
  0.0000000131   657-693   LDL receptor-like module  
  0.0000000694   95-131   LDL receptor-like module  
  0.000000301   414-451   LDL receptor-like module  
  0.00000209   464-499   LDL receptor-like module  
  0.00000301   221-254   LDL receptor-like module  
  0.000034   498-536   LDL receptor-like module  
SPU_000675   0.000000144   1376-1410   LDL receptor-like module  
SPU_000834   0.000000000115   162-200   LDL receptor-like module  
SPU_000873   0.000000157   107-141   LDL receptor-like module  
  0.0017   53-96   LDL receptor-like module  
SPU_000917   0.00000000249   286-320   LDL receptor-like module  
SPU_000926   0.0000000000072   151-188   LDL receptor-like module  
SPU_000937   0.0000000589   236-276   LDL receptor-like module  
  0.000000131   278-311   LDL receptor-like module  
  0.0000131   315-348   LDL receptor-like module  
  0.000733   476-515   LDL receptor-like module  
SPU_000938   0.00000131   225-260   LDL receptor-like module  
  0.00000641   256-289   LDL receptor-like module  
  0.0000196   30-67   LDL receptor-like module  
SPU_000989   0.0000144   191-228   LDL receptor-like module  
SPU_001105   0.0000314   64-95   LDL receptor-like module  
SPU_001476   0.000000812   159-195   LDL receptor-like module  
SPU_001587   0.000000000288   157-196   LDL receptor-like module  
SPU_001617   0.00000000301   356-390   LDL receptor-like module  
SPU_001620   0.000000000119   87-122   LDL receptor-like module  
SPU_001753   0.0000131   1344-1379   LDL receptor-like module  
SPU_002133   0.00000000131   3361-3399   LDL receptor-like module  
  0.0000000209   1055-1093   LDL receptor-like module  
  0.0000000641   4637-4674   LDL receptor-like module  
  0.00000038   4860-4898   LDL receptor-like module  
  0.000000484   4936-4972   LDL receptor-like module  
  0.00000223   1280-1317   LDL receptor-like module  
  0.00000628   2972-3009   LDL receptor-like module  
  0.0000072   859-893   LDL receptor-like module  
  0.000367   5141-5182   LDL receptor-like module  
  0.000537   4439-4471   LDL receptor-like module  
SPU_002894   0.000000000353   167-204   LDL receptor-like module  
  0.00000000144   37-73   LDL receptor-like module  
  0.0000249   12-34   LDL receptor-like module  
  0.0000471   77-109   LDL receptor-like module  
SPU_003039   0.000000000563   144-182   LDL receptor-like module  
SPU_003350   0.0000000144   460-494   LDL receptor-like module  
  0.0000000851   159-193   LDL receptor-like module  
  0.00000249   205-247   LDL receptor-like module  
  0.00101   374-410   LDL receptor-like module  
  0.0034   413-456   LDL receptor-like module  
SPU_003352   0.00000000668   62-96   LDL receptor-like module  
  0.000812   15-59   LDL receptor-like module  
SPU_003552   0.0000103   1591-1626   LDL receptor-like module  
SPU_003554   0.000000916   1751-1787   LDL receptor-like module  
  0.00000262   1307-1340   LDL receptor-like module  
  0.00000327   1566-1600   LDL receptor-like module  
  0.0000034   930-964   LDL receptor-like module  
  0.00000864   1600-1634   LDL receptor-like module  
  0.000109   1907-1941   LDL receptor-like module  
  0.000851   416-449   LDL receptor-like module  
  0.00119   103-127   LDL receptor-like module  
  0.00445   245-282   LDL receptor-like module  
SPU_003635   0.0000511   2882-2918   LDL receptor-like module  
  0.0000864   3043-3074   LDL receptor-like module  
  0.000196   3192-3228   LDL receptor-like module  
  0.000301   3354-3382   LDL receptor-like module  
SPU_003671   0.00000000223   346-381   LDL receptor-like module  
  0.00000000275   747-786   LDL receptor-like module  
  0.000000017   990-1026   LDL receptor-like module  
  0.0000000262   946-987   LDL receptor-like module  
  0.000000196   1189-1228   LDL receptor-like module  
  0.00000034   392-427   LDL receptor-like module  
  0.00000034   1031-1068   LDL receptor-like module  
  0.00000393   309-344   LDL receptor-like module  
  0.0000236   579-616   LDL receptor-like module  
  0.0000432   788-826   LDL receptor-like module  
  0.0000589   431-463   LDL receptor-like module  
SPU_003769   0.0000000275   469-504   LDL receptor-like module  
  0.0000000353   541-575   LDL receptor-like module  
  0.0000000458   432-469   LDL receptor-like module  
  0.00000576   574-607   LDL receptor-like module  
  0.000681   503-530   LDL receptor-like module  
SPU_004355   0.0000000236   91-129   LDL receptor-like module  
  0.00000471   58-84   LDL receptor-like module  
SPU_004416   0.000000012   144-184   LDL receptor-like module  
SPU_004488   0.00000000157   49-86   LDL receptor-like module  
  0.0000000249   93-131   LDL receptor-like module  
SPU_004500   0.0000000249   873-912   LDL receptor-like module  
  0.000000602   408-443   LDL receptor-like module  
  0.000000759   134-168   LDL receptor-like module  
  0.0000111   806-835   LDL receptor-like module  
  0.0000128   554-583   LDL receptor-like module  
  0.000127   838-875   LDL receptor-like module  
  0.00034   732-767   LDL receptor-like module  
  0.0785   783-805   LDL receptor-like module  
SPU_004586   0.000000123   93-133   LDL receptor-like module  
SPU_004748   0.0000000249   495-532   LDL receptor-like module  
SPU_004837   0.0000628   85-121   LDL receptor-like module  
  0.000288   42-78   LDL receptor-like module  
SPU_005028   0.000000000576   516-552   LDL receptor-like module  
  0.00000838   558-591   LDL receptor-like module  
SPU_005039   0.000017   320-353   LDL receptor-like module  
  0.0000497   530-568   LDL receptor-like module  
  0.0000707   140-173   LDL receptor-like module  
  0.0000772   353-386   LDL receptor-like module  
  0.000131   387-421   LDL receptor-like module  
  0.000275   173-212   LDL receptor-like module  
  0.000628   3-30   LDL receptor-like module  
SPU_005041   0.00000288   183-221   LDL receptor-like module  
SPU_005132   0.00000000223   357-393   LDL receptor-like module  
  0.0000000223   485-522   LDL receptor-like module  
  0.00000017   313-349   LDL receptor-like module  
  0.0000017   530-566   LDL receptor-like module  
  0.000563   398-432   LDL receptor-like module  
SPU_005239   0.000000000262   137-173   LDL receptor-like module  
  0.000000419   352-389   LDL receptor-like module  
  0.000000785   95-133   LDL receptor-like module  
  0.00000929   392-442   LDL receptor-like module  
  0.0000102   23-52   LDL receptor-like module  
  0.0000484   207-243   LDL receptor-like module  
  0.0000576   263-290   LDL receptor-like module  
  0.00102   175-209   LDL receptor-like module  
  0.0851   438-459   LDL receptor-like module  
SPU_005427   0.000000000393   246-285   LDL receptor-like module  
SPU_005642   0.0000000563   148-183   LDL receptor-like module  
SPU_005725   0.000000000497   806-844   LDL receptor-like module  
  0.00000000131   767-802   LDL receptor-like module  
  0.00000000419   933-973   LDL receptor-like module  
  0.0000111   848-883   LDL receptor-like module  
SPU_005758   0.00000903   10-46   LDL receptor-like module  
  0.000123   418-454   LDL receptor-like module  
  0.000249   157-192   LDL receptor-like module  
SPU_005798   0.00000733   1194-1234   LDL receptor-like module  
  0.0000314   1110-1145   LDL receptor-like module  
  0.0000327   999-1031   LDL receptor-like module  
  0.0000576   1156-1191   LDL receptor-like module  
  0.000114   1072-1107   LDL receptor-like module  
  0.00114   1034-1069   LDL receptor-like module  
SPU_005847   0.0000000314   334-370   LDL receptor-like module  
  0.00000072   299-335   LDL receptor-like module  
  0.0000013   372-408   LDL receptor-like module  
  0.0000641   266-300   LDL receptor-like module  
  0.0000654   232-265   LDL receptor-like module  
  0.00017   193-232   LDL receptor-like module  
SPU_005848   0.000000445   4-38   LDL receptor-like module  
  0.0000017   47-84   LDL receptor-like module  
SPU_005926   0.000000000668   789-827   LDL receptor-like module  
SPU_005927   0.00000314   59-93   LDL receptor-like module  
  0.0000196   483-525   LDL receptor-like module  
  0.000131   275-306   LDL receptor-like module  
SPU_006165   0.00000000017   748-782   LDL receptor-like module  
  0.000000000615   622-662   LDL receptor-like module  
  0.00000000122   539-576   LDL receptor-like module  
  0.00000000288   421-456   LDL receptor-like module  
  0.00000000314   833-870   LDL receptor-like module  
  0.00000000353   660-700   LDL receptor-like module  
  0.00000000406   503-548   LDL receptor-like module  
  0.00000000825   460-499   LDL receptor-like module  
  0.00000000851   704-741   LDL receptor-like module  
  0.000000017   585-622   LDL receptor-like module  
  0.000000119   790-826   LDL receptor-like module  
  0.00000641   1-29   LDL receptor-like module  
SPU_007052   0.0000000367   686-722   LDL receptor-like module  
  0.000000524   238-273   LDL receptor-like module  
  0.00000183   724-762   LDL receptor-like module  
  0.00000785   384-416   LDL receptor-like module  
  0.00000969   619-648   LDL receptor-like module  
  0.0000929   545-580   LDL receptor-like module  
  0.000106   651-687   LDL receptor-like module  
  0.0707   596-618   LDL receptor-like module  
SPU_007072   0.00000000000615   145-186   LDL receptor-like module  
  0.0000000000123   233-272   LDL receptor-like module  
  0.000000000275   105-146   LDL receptor-like module  
  0.000000000314   274-312   LDL receptor-like module  
  0.00000000034   24-60   LDL receptor-like module  
  0.00000000497   184-229   LDL receptor-like module  
  0.0000000131   59-107   LDL receptor-like module  
  0.000000038   319-352   LDL receptor-like module  
SPU_007255   0.000000183   259-295   LDL receptor-like module  
  0.00000127   224-256   LDL receptor-like module  
  0.00000288   376-413   LDL receptor-like module  
  0.00000694   188-219   LDL receptor-like module  
  0.0000458   302-333   LDL receptor-like module  
  0.0000471   340-374   LDL receptor-like module  
  0.0000524   141-180   LDL receptor-like module  
  0.00353   118-143   LDL receptor-like module  
SPU_007526   0.00000000101   489-527   LDL receptor-like module  
  0.00000000144   547-585   LDL receptor-like module  
  0.00000000209   585-624   LDL receptor-like module  
  0.0000000131   715-753   LDL receptor-like module  
  0.0000000864   756-793   LDL receptor-like module  
  0.000262   630-659   LDL receptor-like module  
SPU_007936   0.000000419   158-192   LDL receptor-like module  
SPU_007937   0.00000825   148-180   LDL receptor-like module  
  0.000419   117-141   LDL receptor-like module  
SPU_008222   0.00000000122   252-290   LDL receptor-like module  
  0.000000157   1584-1619   LDL receptor-like module  
  0.00000017   2123-2160   LDL receptor-like module  
  0.000000537   1964-1997   LDL receptor-like module  
  0.00000432   33-68   LDL receptor-like module  
  0.000196   1387-1419   LDL receptor-like module  
  0.00353   2329-2370   LDL receptor-like module  
SPU_008926   0.00000275   9-46   LDL receptor-like module  
SPU_009015   0.000000000196   1000-1037   LDL receptor-like module  
  0.000000000406   20-57   LDL receptor-like module  
  0.00000000157   705-743   LDL receptor-like module  
  0.0000000017   429-466   LDL receptor-like module  
  0.0000000126   508-544   LDL receptor-like module  
  0.0000000127   958-995   LDL receptor-like module  
  0.0000000393   176-211   LDL receptor-like module  
  0.000000249   470-506   LDL receptor-like module  
  0.000000367   762-795   LDL receptor-like module  
  0.000000838   546-582   LDL receptor-like module  
  0.00000157   267-306   LDL receptor-like module  
  0.00000537   796-831   LDL receptor-like module  
  0.0000115   1043-1076   LDL receptor-like module  
  0.000038   229-265   LDL receptor-like module  
SPU_009242   0.00000000089   1213-1250   LDL receptor-like module  
  0.0000000034   1254-1291   LDL receptor-like module  
  0.000038   1295-1329   LDL receptor-like module  
SPU_009319   0.00000000916   463-498   LDL receptor-like module  
SPU_009638   0.0000000131   1145-1181   LDL receptor-like module  
  0.00000144   1673-1705   LDL receptor-like module  
SPU_009754   0.000000000956   322-357   LDL receptor-like module  
SPU_009865   0.000000183   82-117   LDL receptor-like module  
  0.0122   29-72   LDL receptor-like module  
SPU_009930   0.0000000000196   73-112   LDL receptor-like module  
  0.000000000262   114-153   LDL receptor-like module  
  0.0000000144   24-69   LDL receptor-like module  
  0.000000798   3-26   LDL receptor-like module  
SPU_009983   0.00000109   363-395   LDL receptor-like module  
SPU_010022   0.0000000183   231-266   LDL receptor-like module  
  0.000000812   196-228   LDL receptor-like module  
  0.000000969   383-419   LDL receptor-like module  
  0.00000458   349-380   LDL receptor-like module  
  0.00000576   160-190   LDL receptor-like module  
  0.0000124   113-153   LDL receptor-like module  
  0.0000124   273-306   LDL receptor-like module  
  0.000034   81-115   LDL receptor-like module  
  0.0000484   421-459   LDL receptor-like module  
  0.0000903   309-342   LDL receptor-like module  
SPU_010069   0.00000000563   51-90   LDL receptor-like module  
  0.0000000249   13-49   LDL receptor-like module  
SPU_010093   0.00000000694   479-518   LDL receptor-like module  
  0.00000471   444-476   LDL receptor-like module  
SPU_010195   0.0000196   148-180   LDL receptor-like module  
SPU_010206   0.00000942   287-323   LDL receptor-like module  
SPU_010257   0.000000000144   6-44   LDL receptor-like module  
  0.000000117   217-253   LDL receptor-like module  
  0.000000223   165-204   LDL receptor-like module  
  0.00000798   253-293   LDL receptor-like module  
SPU_010301   0.000000000537   116-154   LDL receptor-like module  
SPU_010325   0.0000000877   151-185   LDL receptor-like module  
SPU_010560   0.0000073   76-122   LDL receptor-like module  
  0.00111   48-80   LDL receptor-like module  
SPU_010681   0.000000196   568-607   LDL receptor-like module  
  0.00157   609-641   LDL receptor-like module  
SPU_010967   0.0000000759   440-473   LDL receptor-like module  
SPU_011026   0.00000000432   236-280   LDL receptor-like module  
  0.0000589   394-435   LDL receptor-like module  
SPU_011062   0.0000017   189-223   LDL receptor-like module  
SPU_011363   0.00000000458   167-204   LDL receptor-like module  
SPU_011490   0.0000000034   197-235   LDL receptor-like module  
SPU_011525   0.00000196   1230-1264   LDL receptor-like module  
SPU_011628   0.00000497   46-83   LDL receptor-like module  
  0.000223   123-158   LDL receptor-like module  
  0.000825   83-120   LDL receptor-like module  
SPU_011670   0.000000000249   160-199   LDL receptor-like module  
SPU_011971   0.000000000733   1163-1204   LDL receptor-like module  
  0.000000000982   1130-1169   LDL receptor-like module  
  0.00000000236   1293-1333   LDL receptor-like module  
  0.0000000144   1091-1126   LDL receptor-like module  
  0.00000157   1337-1375   LDL receptor-like module  
  0.000144   1208-1243   LDL receptor-like module  
SPU_012324   0.000000000196   122-163   LDL receptor-like module  
  0.00000000101   83-123   LDL receptor-like module  
  0.00000000445   8-47   LDL receptor-like module  
  0.00000000785   170-209   LDL receptor-like module  
SPU_012382   0.0000000301   134-170   LDL receptor-like module  
  0.000124   260-299   LDL receptor-like module  
SPU_012383   0.00000000157   1857-1900   LDL receptor-like module  
  0.00000011   1696-1732   LDL receptor-like module  
SPU_012752   0.000000000563   8-46   LDL receptor-like module  
  0.00000000157   317-354   LDL receptor-like module  
SPU_012869   0.00000000458   1392-1432   LDL receptor-like module  
  0.0000000055   1353-1388   LDL receptor-like module  
  0.00000000628   1314-1350   LDL receptor-like module  
  0.0000916   1433-1467   LDL receptor-like module  
SPU_013247   0.000000209   108-143   LDL receptor-like module  
  0.00798   55-98   LDL receptor-like module  
SPU_013914   0.00000000000812   79-119   LDL receptor-like module  
  0.0000000000942   40-77   LDL receptor-like module  
SPU_014017   0.00000393   2-32   LDL receptor-like module  
SPU_014074   0.0000000000275   416-454   LDL receptor-like module  
  0.0000000000785   209-250   LDL receptor-like module  
  0.0000000000969   164-210   LDL receptor-like module  
  0.000000000183   335-375   LDL receptor-like module  
  0.000000000628   255-291   LDL receptor-like module  
  0.00000000184   90-134   LDL receptor-like module  
  0.0000000421   127-169   LDL receptor-like module  
  0.000000393   293-337   LDL receptor-like module  
  0.000000681   47-86   LDL receptor-like module  
SPU_014215   0.0000000000602   93-135   LDL receptor-like module  
  0.00000000393   137-175   LDL receptor-like module  
  0.0000012   228-266   LDL receptor-like module  
  0.00000942   27-58   LDL receptor-like module  
  0.00131   197-229   LDL receptor-like module  
  0.00812   1-17   LDL receptor-like module  
SPU_014468   0.00000000000183   415-456   LDL receptor-like module  
  0.0000000157   470-507   LDL receptor-like module  
  0.0000000183   378-413   LDL receptor-like module  
  0.00000011   515-552   LDL receptor-like module  
  0.00000043   325-366   LDL receptor-like module  
SPU_014777   0.0000103   26-62   LDL receptor-like module  
  0.0000798   748-783   LDL receptor-like module  
  0.000249   326-360   LDL receptor-like module  
  0.000301   597-631   LDL receptor-like module  
  0.000877   177-212   LDL receptor-like module  
SPU_014814   0.0000563   2-32   LDL receptor-like module  
SPU_014827   0.00000262   364-393   LDL receptor-like module  
SPU_014865   0.000000628   212-243   LDL receptor-like module  
  0.00034   139-179   LDL receptor-like module  
  0.00127   182-207   LDL receptor-like module  
SPU_014983   0.00000000000131   255-295   LDL receptor-like module  
  0.0000000000223   63-103   LDL receptor-like module  
  0.0000000000419   217-257   LDL receptor-like module  
  0.000000000101   295-332   LDL receptor-like module  
  0.000000000144   140-177   LDL receptor-like module  
  0.000000000314   181-217   LDL receptor-like module  
  0.0000000113   103-136   LDL receptor-like module  
  0.0000054   19-60   LDL receptor-like module  
SPU_015161   0.00000772   4-42   LDL receptor-like module  
SPU_015198   0.00000000115   538-574   LDL receptor-like module  
SPU_015463   0.0000184   46-89   LDL receptor-like module  
SPU_015872   0.00000055   148-183   LDL receptor-like module  
  0.0000089   191-223   LDL receptor-like module  
SPU_015879   0.000000812   1098-1135   LDL receptor-like module  
  0.00000628   1294-1325   LDL receptor-like module  
  0.0000196   1065-1099   LDL receptor-like module  
  0.00034   1026-1060   LDL receptor-like module  
  0.000484   749-780   LDL receptor-like module  
  0.0038   903-934   LDL receptor-like module  
SPU_016171   0.0000000995   526-564   LDL receptor-like module  
  0.00000034   834-870   LDL receptor-like module  
  0.00000183   333-370   LDL receptor-like module  
  0.00000654   447-484   LDL receptor-like module  
  0.0000262   486-523   LDL receptor-like module  
  0.0000288   796-830   LDL receptor-like module  
  0.0000327   373-409   LDL receptor-like module  
  0.000105   413-445   LDL receptor-like module  
SPU_016174   0.0000055   86-121   LDL receptor-like module  
SPU_016212   0.00000000000406   114-154   LDL receptor-like module  
SPU_016364   0.00000000000497   37-78   LDL receptor-like module  
  0.0000000000825   76-121   LDL receptor-like module  
  0.000000000209   2-39   LDL receptor-like module  
SPU_016402   0.00000124   208-244   LDL receptor-like module  
  0.00000196   171-206   LDL receptor-like module  
SPU_016627   0.000000131   3-40   LDL receptor-like module  
SPU_016843   0.0000000103   626-657   LDL receptor-like module  
SPU_016868   0.0000128   120-155   LDL receptor-like module  
SPU_016915   0.0000314   226-260   LDL receptor-like module  
  0.0000615   75-110   LDL receptor-like module  
  0.0223   2-18   LDL receptor-like module  
SPU_016977   0.0000000000131   59-97   LDL receptor-like module  
  0.0000000000746   139-176   LDL receptor-like module  
  0.000000000209   180-216   LDL receptor-like module  
  0.00000000602   102-135   LDL receptor-like module  
  0.00000258   18-59   LDL receptor-like module  
SPU_016981   0.000000249   1596-1630   LDL receptor-like module  
  0.00000105   1558-1595   LDL receptor-like module  
SPU_017062   0.000017   121-156   LDL receptor-like module  
SPU_017329   0.00000000122   372-415   LDL receptor-like module  
  0.00000000183   301-342   LDL receptor-like module  
  0.0000000034   418-455   LDL receptor-like module  
  0.00000000353   453-493   LDL receptor-like module  
  0.00000000458   148-181   LDL receptor-like module  
  0.0000000101   626-663   LDL receptor-like module  
  0.0000000406   184-218   LDL receptor-like module  
  0.0000000772   225-262   LDL receptor-like module  
  0.000000183   105-141   LDL receptor-like module  
  0.000000301   584-620   LDL receptor-like module  
  0.000000707   496-533   LDL receptor-like module  
  0.00000484   264-298   LDL receptor-like module  
  0.0000511   66-104   LDL receptor-like module  
  0.000183   542-577   LDL receptor-like module  
SPU_017361   0.0000307   3574-3615   LDL receptor-like module  
  0.00556   3530-3572   LDL receptor-like module  
SPU_018087   0.0000000000157   37-73   LDL receptor-like module  
SPU_018275   0.000000969   14-46   LDL receptor-like module  
SPU_018462   0.0000000000798   67-103   LDL receptor-like module  
  0.0000000903   119-158   LDL receptor-like module  
  0.000000119   173-212   LDL receptor-like module  
  0.000497   38-59   LDL receptor-like module  
SPU_018625   0.0000000275   47-80   LDL receptor-like module  
  0.00000223   198-235   LDL receptor-like module  
  0.0000196   159-193   LDL receptor-like module  
  0.000367   83-108   LDL receptor-like module  
  0.000576   121-153   LDL receptor-like module  
SPU_018671   0.0000000101   1864-1901   LDL receptor-like module  
  0.000000055   1772-1807   LDL receptor-like module  
  0.000000353   914-947   LDL receptor-like module  
  0.000000668   766-799   LDL receptor-like module  
SPU_018689   0.00000000114   33-62   LDL receptor-like module  
SPU_018871   0.00000144   256-283   LDL receptor-like module  
  0.00000249   287-321   LDL receptor-like module  
  0.0000458   82-116   LDL receptor-like module  
  0.0000641   37-75   LDL receptor-like module  
  0.000089   6-39   LDL receptor-like module  
SPU_018993   0.00000000055   10-49   LDL receptor-like module  
  0.00000000589   53-87   LDL receptor-like module  
SPU_019150   0.000000000144   254-294   LDL receptor-like module  
  0.000000000563   171-211   LDL receptor-like module  
  0.000000000668   138-174   LDL receptor-like module  
  0.000000183   95-134   LDL receptor-like module  
SPU_019158   0.00000000102   14-50   LDL receptor-like module  
  0.00000000825   49-89   LDL receptor-like module  
  0.0000000262   181-219   LDL receptor-like module  
  0.0000000942   221-258   LDL receptor-like module  
  0.000314   94-124   LDL receptor-like module  
SPU_019186   0.0000000838   300-336   LDL receptor-like module  
  0.000000131   198-234   LDL receptor-like module  
SPU_019354   0.00000000127   5-44   LDL receptor-like module  
  0.00000000131   82-120   LDL receptor-like module  
  0.0000000115   236-271   LDL receptor-like module  
  0.000000223   47-80   LDL receptor-like module  
  0.000000641   327-366   LDL receptor-like module  
  0.0000157   289-325   LDL receptor-like module  
SPU_019456   0.00000537   174-207   LDL receptor-like module  
SPU_019573   0.00000103   119-160   LDL receptor-like module  
SPU_019615   0.00000196   96-131   LDL receptor-like module  
SPU_019872   0.00000017   48-81   LDL receptor-like module  
  0.000000209   84-122   LDL receptor-like module  
  0.000000353   212-249   LDL receptor-like module  
  0.0000602   173-208   LDL receptor-like module  
  0.000236   131-166   LDL receptor-like module  
SPU_019877   0.00000236   409-445   LDL receptor-like module  
  0.017   385-402   LDL receptor-like module  
SPU_020315   0.0000000000982   277-318   LDL receptor-like module  
  0.000000000183   114-153   LDL receptor-like module  
  0.00000236   787-816   LDL receptor-like module  
  0.00000694   854-890   LDL receptor-like module  
  0.0000101   709-747   LDL receptor-like module  
  0.000126   819-855   LDL receptor-like module  
  0.000733   552-582   LDL receptor-like module  
SPU_020325   0.000000000567   41-86   LDL receptor-like module  
  0.000000772   88-126   LDL receptor-like module  
  0.00000877   129-162   LDL receptor-like module  
SPU_020744   0.00000000157   1586-1622   LDL receptor-like module  
  0.00000000275   4103-4146   LDL receptor-like module  
  0.00000000982   1623-1661   LDL receptor-like module  
  0.0000000183   1764-1804   LDL receptor-like module  
  0.000000038   1663-1703   LDL receptor-like module  
  0.0000000681   1710-1750   LDL receptor-like module  
SPU_020902   0.0000000367   266-303   LDL receptor-like module  
SPU_020978   0.000000000681   998-1036   LDL receptor-like module  
  0.000000000746   1038-1074   LDL receptor-like module  
  0.000000000825   3733-3769   LDL receptor-like module  
  0.000000000956   1117-1156   LDL receptor-like module  
  0.00000000111   2829-2873   LDL receptor-like module  
  0.0000000013   3094-3133   LDL receptor-like module  
  0.00000000157   3770-3810   LDL receptor-like module  
  0.0000000017   3011-3046   LDL receptor-like module  
  0.00000000262   2971-3006   LDL receptor-like module  
  0.00000000511   3135-3174   LDL receptor-like module  
  0.0000000055   3049-3090   LDL receptor-like module  
  0.0000000055   3928-3967   LDL receptor-like module  
  0.0000000107   3691-3728   LDL receptor-like module  
  0.0000000113   908-947   LDL receptor-like module  
  0.0000000128   949-986   LDL receptor-like module  
  0.0000000196   2929-2963   LDL receptor-like module  
  0.0000000196   3853-3889   LDL receptor-like module  
  0.0000000249   3892-3930   LDL receptor-like module  
  0.0000000262   3566-3601   LDL receptor-like module  
  0.0000000301   3603-3648   LDL receptor-like module  
  0.0000000524   3814-3851   LDL receptor-like module  
  0.000000144   18-56   LDL receptor-like module  
  0.000000209   3185-3221   LDL receptor-like module  
  0.000000249   1163-1200   LDL receptor-like module  
  0.000000301   3651-3688   LDL receptor-like module  
  0.00000175   1202-1239   LDL receptor-like module  
  0.00000353   2794-2832   LDL receptor-like module  
  0.00000668   1076-1112   LDL receptor-like module  
  0.00000877   2873-2916   LDL receptor-like module  
SPU_021592   0.00000000262   1273-1307   LDL receptor-like module  
SPU_021671   0.000000000314   160-199   LDL receptor-like module  
SPU_022093   0.0000458   28-65   LDL receptor-like module  
  0.0000877   288-323   LDL receptor-like module  
SPU_022096   0.0000497   530-566   LDL receptor-like module  
  0.0000785   237-267   LDL receptor-like module  
  0.000236   380-415   LDL receptor-like module  
SPU_022132   0.000000000563   624-661   LDL receptor-like module  
  0.00000000301   659-699   LDL receptor-like module  
  0.0000000038   461-496   LDL receptor-like module  
  0.00000000785   538-579   LDL receptor-like module  
  0.00000000942   786-823   LDL receptor-like module  
  0.00000000956   500-539   LDL receptor-like module  
  0.0000000157   584-621   LDL receptor-like module  
  0.0000000183   703-740   LDL receptor-like module  
  0.000000144   743-779   LDL receptor-like module  
SPU_022308   0.00000223   184-214   LDL receptor-like module  
SPU_022443   0.0000000589   570-607   LDL receptor-like module  
  0.00000196   798-830   LDL receptor-like module  
  0.0000432   373-404   LDL receptor-like module  
SPU_022714   0.00000288   315-347   LDL receptor-like module  
  0.00000956   279-310   LDL receptor-like module  
  0.000144   211-243   LDL receptor-like module  
  0.000183   232-272   LDL receptor-like module  
  0.000196   11-44   LDL receptor-like module  
  0.000471   103-128   LDL receptor-like module  
  0.000668   146-170   LDL receptor-like module  
  0.00117   54-86   LDL receptor-like module  
  0.00249   180-212   LDL receptor-like module  
  0.00327   356-389   LDL receptor-like module  
SPU_022862   0.0000113   141-177   LDL receptor-like module  
  0.0000275   301-336   LDL receptor-like module  
  0.0000759   451-483   LDL receptor-like module  
  0.000301   3-32   LDL receptor-like module  
SPU_022881   0.00000000106   124-158   LDL receptor-like module  
  0.00000000864   268-304   LDL receptor-like module  
SPU_023038   0.0000000011   4-39   LDL receptor-like module  
SPU_023044   0.0000000034   911-955   LDL receptor-like module  
  0.00000654   957-995   LDL receptor-like module  
  0.000103   998-1031   LDL receptor-like module  
SPU_023060   0.0000000183   3712-3745   LDL receptor-like module  
  0.0000000236   4140-4175   LDL receptor-like module  
  0.0000000798   2750-2786   LDL receptor-like module  
  0.000000106   545-582   LDL receptor-like module  
  0.000000406   774-806   LDL receptor-like module  
  0.000000602   2525-2563   LDL receptor-like module  
  0.000000759   4071-4109   LDL receptor-like module  
  0.000000942   4787-4823   LDL receptor-like module  
  0.00000275   347-378   LDL receptor-like module  
  0.00000353   4574-4606   LDL receptor-like module  
  0.000445   3512-3545   LDL receptor-like module  
  0.000484   2328-2363   LDL receptor-like module  
SPU_023175   0.000000000236   380-420   LDL receptor-like module  
  0.000000000864   127-165   LDL receptor-like module  
  0.0000000017   253-291   LDL receptor-like module  
  0.00000000209   294-331   LDL receptor-like module  
SPU_023443   0.000000182   803-837   LDL receptor-like module  
  0.000000743   453-485   LDL receptor-like module  
  0.0000021   536-572   LDL receptor-like module  
  0.00000266   697-730   LDL receptor-like module  
  0.00000799   615-649   LDL receptor-like module  
SPU_023569   0.0000249   122-165   LDL receptor-like module  
  0.0000812   76-98   LDL receptor-like module  
SPU_023577   0.000000000785   831-866   LDL receptor-like module  
  0.00000000982   790-827   LDL receptor-like module  
  0.000000877   960-996   LDL receptor-like module  
  0.000301   870-905   LDL receptor-like module  
SPU_023761   0.00000000249   28-65   LDL receptor-like module  
  0.00000000838   74-110   LDL receptor-like module  
  0.0812   5-26   LDL receptor-like module  
SPU_024024   0.0000000406   211-250   LDL receptor-like module  
SPU_024151   0.0000000105   501-538   LDL receptor-like module  
  0.0000000209   427-462   LDL receptor-like module  
  0.0000000301   545-575   LDL receptor-like module  
  0.000000367   463-500   LDL receptor-like module  
  0.000000654   389-427   LDL receptor-like module  
  0.0000628   358-386   LDL receptor-like module  
  0.00017   320-356   LDL receptor-like module  
  0.00471   590-613   LDL receptor-like module  
SPU_024175   0.000000000903   293-330   LDL receptor-like module  
SPU_024490   0.0000000105   456-492   LDL receptor-like module  
  0.0000000733   231-269   LDL receptor-like module  
  0.0000589   34-69   LDL receptor-like module  
SPU_024519   0.000000000982   597-634   LDL receptor-like module  
SPU_024660   0.00000131   218-256   LDL receptor-like module  
SPU_024834   0.00000419   860-894   LDL receptor-like module  
  0.00000484   659-692   LDL receptor-like module  
  0.00105   1083-1117   LDL receptor-like module  
SPU_024925   0.00000000353   394-431   LDL receptor-like module  
  0.0000000144   346-390   LDL receptor-like module  
  0.00000107   269-309   LDL receptor-like module  
  0.00000249   475-519   LDL receptor-like module  
  0.00000301   435-477   LDL receptor-like module  
  0.00000537   595-638   LDL receptor-like module  
  0.00000576   633-671   LDL receptor-like module  
  0.00000589   675-719   LDL receptor-like module  
  0.00000615   715-760   LDL receptor-like module  
  0.00000615   875-918   LDL receptor-like module  
  0.00000746   553-590   LDL receptor-like module  
  0.00000825   795-839   LDL receptor-like module  
  0.0000114   513-551   LDL receptor-like module  
  0.0000144   190-228   LDL receptor-like module  
  0.0000209   233-269   LDL receptor-like module  
  0.000034   913-950   LDL receptor-like module  
  0.0000367   755-796   LDL receptor-like module  
  0.0000419   835-877   LDL receptor-like module  
  0.0000772   58-87   LDL receptor-like module  
  0.00038   312-350   LDL receptor-like module  
  0.00127   153-194   LDL receptor-like module  
  0.038   106-140   LDL receptor-like module  
SPU_024943   0.0000000367   43-80   LDL receptor-like module  
  0.00209   164-206   LDL receptor-like module  
SPU_025128   0.00000111   196-231   LDL receptor-like module  
  0.000131   161-198   LDL receptor-like module  
SPU_025837   0.00000000484   227-264   LDL receptor-like module  
  0.000000072   760-796   LDL receptor-like module  
SPU_026060   0.00000275   5-41   LDL receptor-like module  
  0.000249   152-187   LDL receptor-like module  
SPU_026191   0.000000183   124-159   LDL receptor-like module  
  0.00000034   164-200   LDL receptor-like module  
  0.00000038   87-120   LDL receptor-like module  
  0.00000628   367-402   LDL receptor-like module  
  0.00000746   51-90   LDL receptor-like module  
SPU_026398   0.000000314   483-523   LDL receptor-like module  
  0.00000759   449-484   LDL receptor-like module  
  0.0000798   411-445   LDL receptor-like module  
  0.000131   135-168   LDL receptor-like module  
  0.00101   289-321   LDL receptor-like module  
SPU_026506   0.0000877   273-305   LDL receptor-like module  
  0.000602   124-156   LDL receptor-like module  
SPU_026573   0.000000406   673-710   LDL receptor-like module  
SPU_026589   0.0000314   139-177   LDL receptor-like module  
  0.00249   3-30   LDL receptor-like module  
SPU_026637   0.00000000128   755-788   LDL receptor-like module  
  0.0000000055   620-660   LDL receptor-like module  
  0.000000034   898-934   LDL receptor-like module  
SPU_026917   0.000000524   460-494   LDL receptor-like module  
  0.0000471   269-305   LDL receptor-like module  
  0.0000942   430-460   LDL receptor-like module  
SPU_027084   0.000000000406   344-380   LDL receptor-like module  
  0.000000000445   379-419   LDL receptor-like module  
  0.000000000497   304-341   LDL receptor-like module  
  0.0000000017   454-497   LDL receptor-like module  
  0.0000126   424-456   LDL receptor-like module  
SPU_027136   0.000000471   20-58   LDL receptor-like module  
SPU_027625   0.0000000825   275-310   LDL receptor-like module  
SPU_028049   0.0000000034   487-522   LDL receptor-like module  
  0.0000000105   656-691   LDL receptor-like module  
  0.00000034   452-482   LDL receptor-like module  
  0.00000089   694-735   LDL receptor-like module  
  0.00000275   525-561   LDL receptor-like module  
  0.000157   570-604   LDL receptor-like module  
SPU_028103   0.000000000471   27-64   LDL receptor-like module  
  0.00000000367   62-103   LDL receptor-like module  
  0.00000000733   102-142   LDL receptor-like module  
  0.000034   141-169   LDL receptor-like module  
SPU_028271   0.000000432   129-167   LDL receptor-like module  
  0.0000367   169-200   LDL receptor-like module  
SPU_028326   0.0000000034   399-436   LDL receptor-like module  
SPU_028390   0.000000759   293-330   LDL receptor-like module  
SPU_028418   0.0000126   287-322   LDL receptor-like module  
SPU_028445   0.00000000223   3-40   LDL receptor-like module  
SPU_028470   0.00000223   636-670   LDL receptor-like module  
  0.0183   582-625   LDL receptor-like module  
SPU_028581   0.000000000471   499-538   LDL receptor-like module  
  0.00000000641   712-750   LDL receptor-like module  
  0.00000000825   539-576   LDL receptor-like module  
  0.0000000223   363-399   LDL receptor-like module  
  0.0000000262   400-435   LDL receptor-like module  
  0.000000196   327-364   LDL receptor-like module  
  0.00000262   295-323   LDL receptor-like module  
  0.0000117   222-261   LDL receptor-like module  
  0.0000707   766-786   LDL receptor-like module  
  0.00929   649-672   LDL receptor-like module  
  0.0236   266-294   LDL receptor-like module  
  0.0249   438-461   LDL receptor-like module  
SPU_028620   0.000000000144   72-113   LDL receptor-like module  
  0.000000000576   32-73   LDL receptor-like module  
  0.0000000055   120-159   LDL receptor-like module  
SPU_030090   0.000000000275   112-152   LDL receptor-like module  
  0.000000000825   151-192   LDL receptor-like module  
  0.00000000119   190-230   LDL receptor-like module  
  0.00000000157   840-872   LDL receptor-like module  
  0.0000000017   457-492   LDL receptor-like module  
  0.0000000038   73-113   LDL receptor-like module  
  0.00000000668   992-1025   LDL receptor-like module  
  0.0000000144   953-989   LDL receptor-like module  
  0.0000000144   274-311   LDL receptor-like module  
  0.0000000471   874-910   LDL receptor-like module  
  0.0000000707   916-949   LDL receptor-like module  
  0.000000072   690-722   LDL receptor-like module  
  0.0000000877   618-650   LDL receptor-like module  
  0.000000102   419-455   LDL receptor-like module  
  0.000000196   764-796   LDL receptor-like module  
  0.000000406   373-415   LDL receptor-like module  
  0.000000419   573-614   LDL receptor-like module  
  0.000000458   1025-1066   LDL receptor-like module  
  0.000000471   239-272   LDL receptor-like module  
  0.000000511   316-349   LDL receptor-like module  
  0.000000537   726-758   LDL receptor-like module  
  0.000000851   801-837   LDL receptor-like module  
  0.00000124   654-686   LDL receptor-like module  
  0.0000017   501-534   LDL receptor-like module  
  0.0000017   541-576   LDL receptor-like module  
 
Weak hits:
SPU_000362   0.000654   2054-2086   LDL receptor-like module  
  0.000807   4137-4169   LDL receptor-like module  
  0.000851   484-515   LDL receptor-like module  
  0.00135   2474-2506   LDL receptor-like module  
  0.00349   1269-1302   LDL receptor-like module  
  0.00436   2512-2544   LDL receptor-like module  
  0.00807   3352-3384   LDL receptor-like module  
  0.00872   2932-2964   LDL receptor-like module  
SPU_000792   0.00288   82-113   LDL receptor-like module  
SPU_001516   0.000135   784-816   LDL receptor-like module  
SPU_003206   0.0072   48-80   LDL receptor-like module  
SPU_005809   0.000103   245-287   LDL receptor-like module  
SPU_011655   0.000321   45-77   LDL receptor-like module  
SPU_012106   0.000575   48-80   LDL receptor-like module  
SPU_013723   0.000628   325-358   LDL receptor-like module  
SPU_017954   0.000105   100-139   LDL receptor-like module  
  0.00168   67-98   LDL receptor-like module  
SPU_018579   0.00471   86-120   LDL receptor-like module  
SPU_022320   0.000106   120-154   LDL receptor-like module  
SPU_022366   0.0275   84-106   LDL receptor-like module  
SPU_024435   0.000114   1277-1315   LDL receptor-like module  
  0.000196   1127-1162   LDL receptor-like module  
  0.000497   978-1013   LDL receptor-like module  
SPU_026507   0.0366   3-27   LDL receptor-like module  

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Add assignments from groups of genomes

View all assignments containing a LDL receptor-like module domain in each group of genomes.

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Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   327216 327216
No Yes Homo sapiens 76_38 Human 548 151
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 216 47
No Yes Gorilla gorilla 76_3.1 Western gorilla 276 65
No Yes Pongo abelii 76_2 Sumatran orangutan 204 46
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 205 51
No Yes Papio anubis 76 Olive baboon 223 47
No Yes Macaca mulatta 76_1 Rhesus monkey 283 70
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 461 115
No Yes Otolemur garnettii 76_3 Small-eared galago 203 44
No Yes Microcebus murinus 76_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 76_5.0 Norway rat 208 49
No Yes Mus musculus 76_38 House mouse 402 97
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 224 46
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 238 49
No Yes Cavia porcellus 76_3 Domestic guinea pig 223 51
No Yes Oryctolagus cuniculus 76_2 Rabbit 225 50
No Yes Ochotona princeps 76 American pika 188 39
No Yes Tupaia belangeri 76 Northern tree shrew 156 37
No Yes Sus scrofa 76_10.2 Pig 167 58
No Yes Bos taurus 76_3.1 Cattle 211 52
No Yes Ovis aries 76_3.1 Sheep 271 58
No Yes Vicugna pacos 76_1 Alpaca 117 23
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 76_1.0 Domestic ferret 233 47
No Yes Ailuropoda melanoleuca 76_1 Giant panda 261 52
No Yes Canis familiaris 76_3.1 Dog 374 66
No Yes Felis catus 76_6.2 Domestic cat 246 53
No Yes Equus caballus 76_2 Horse 321 60
No Yes Myotis lucifugus 76_2.0 Little brown bat 187 45
No Yes Pteropus vampyrus 76_1 Large flying fox 203 43
No Yes Sorex araneus 76_1 European shrew 106 25
No Yes Erinaceus europaeus 76 Western European hedgehog 139 33
No Yes Procavia capensis 76_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 76_3 African savanna elephant 236 56
No Yes Echinops telfairi 76 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 268 57
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 76_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 228 61
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 214 49
No Yes Ornithorhynchus anatinus 76_5 Platypus 206 53
No Yes Saccoglossus kowalevskii v3.0   1261 297
No Yes Petromyzon marinus 76_7.0 Sea lamprey 203 25
No Yes Meleagris gallopavo 76_2 Turkey 201 50
No Yes Gallus gallus 76_4 Chicken 222 45
No Yes Anas platyrhynchos 76_1.0 Mallard 185 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 193 44
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 218 43
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 212 59
No Yes Anolis carolinensis 76_2.0 Green anole 230 49
No Yes Xenopus laevis African clawed frog 176 45
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 231 62
No Yes Latimeria chalumnae 76_1 Coelacanth 249 52
No Yes Lepisosteus oculatus 76 Spotted gar 373 70
No Yes Gadus morhua 76_1 Atlantic cod 251 50
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 445 69
No Yes Takifugu rubripes 76_4 Torafugu 1153 201
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 365 68
No Yes Oryzias latipes 76_1 Japanese medaka 304 56
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 308 56
No Yes Poecilia formosa 76 Amazon molly 313 57
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 440 81
No Yes Astyanax mexicanus 76 Mexican tetra 293 73
No Yes Danio rerio 76_9 Zebrafish 537 103
No Yes Oikopleura dioica   54 30
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 454 80
No Yes Ciona intestinalis 76 Vase tunicate 156 67
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 601 193
No Yes Adineta vaga   274 125
No Yes Octopus bimaculoides 280   398 81
No Yes Crassostrea gigas 22 Pacific oyster 237 86
No Yes Lottia gigantea Owl limpet 212 60
No Yes Helobdella robusta   208 57
No Yes Capitella sp. I   359 115
No Yes Danaus plexippus OGS1.0 Monarch butterfly 163 38
No Yes Heliconius melpomene Postman butterfly 145 29
No Yes Bombyx mori Domestic silkworm 97 41
No Yes Nasonia vitripennis Jewel wasp 89 27
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 323 64
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 128 38
No Yes Linepithema humile v1.1 Argentine ant 122 43
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 116 43
No Yes Solenopsis invicta v.2.2.3 Red fire ant 98 38
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 126 36
No Yes Atta cephalotes v1.1   125 40
No Yes Camponotus floridanus v3.3 Florida carpenter ant 131 35
No Yes Lucilia cuprina Australian sheep blowfly 189 33
No Yes Drosophila grimshawi 1.3   174 37
No Yes Drosophila willistoni 1.3   172 39
No Yes Drosophila pseudoobscura 2.13   181 42
No Yes Drosophila persimilis 1.3   170 43
No Yes Drosophila suzukii   171 33
No Yes Drosophila yakuba 1.3   172 38
No Yes Drosophila simulans 1.3   99 33
No Yes Drosophila sechellia 1.3   155 40
No Yes Drosophila melanogaster 76_5 Fruit fly 643 97
No Yes Drosophila erecta 1.3   173 37
No Yes Drosophila ananassae 1.3   157 32
No Yes Drosophila virilis 1.2   158 36
No Yes Drosophila mojavensis 1.3   171 37
No Yes Megaselia scalaris 22   44 19
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 166 35
No Yes Culex pipiens quinquefasciatus Southern house mosquito 107 38
No Yes Anopheles darlingi 22 American malaria mosquito 118 28
No Yes Anopheles gambiae 49_3j African malaria mosquito 161 32
No Yes Tribolium castaneum 3.0 Red flour beetle 179 43
No Yes Pediculus humanus corporis (Early assembly) Human body louse 171 34
No Yes Acyrthosiphon pisum Pea aphid 150 36
No Yes Rhodnius prolixus 22   125 30
No Yes Daphnia pulex Common water flea 221 61
No Yes Strigamia maritima 22   202 47
No Yes Sarcoptes scabiei   128 42
No Yes Tetranychus urticae Two-spotted spider mite 193 71
No Yes Ixodes scapularis (Preliminary) Black-legged tick 139 44
No Yes Pristionchus pacificus   91 28
No Yes Meloidogyne incognita Southern root-knot nematode 95 18
No Yes Meloidogyne hapla   27 13
No Yes Onchocerca volvulus 22   73 17
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 129 27
No Yes Caenorhabditis japonica   103 24
No Yes Caenorhabditis brenneri   168 39
No Yes Caenorhabditis remanei   123 29
No Yes Caenorhabditis elegans 76_235 Roundworm 177 44
No Yes Caenorhabditis briggsae 2   118 26
No Yes Trichinella spiralis 22   119 32
No Yes Hymenolepis microstoma   45 11
No Yes Echinococcus multilocularis   39 13
No Yes Echinococcus granulosus   38 12
No Yes Taenia solium Pork tapeworm 35 17
No Yes Schistosoma mansoni   18 9
No Yes Mnemiopsis leidyi Sea walnut 413 204
No Yes Thelohanellus kitauei   270 126
No Yes Acropora digitifera v1.0   105 35
No Yes Nematostella vectensis 1.0 Starlet sea anemone 144 35
No Yes Hydra vulgaris   77 17
No Yes Amphimedon queenslandica   13 3
No Yes Trichoplax adhaerens   103 18
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   17 17
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Rhizomucor miehei CAU432   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 3 3
No Yes Triticum aestivum 22 Bread wheat 5 5
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Naegleria gruberi   1 1
No Yes Trichomonas vaginalis   8 6
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Haliangium ochraceum DSM 14365   4 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 272 61
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 446 71
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 209 34
No Yes Ascaris suum Victoria/Ghent Pig roundworm 106 28
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 150 35
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   1 1
No Yes Cryptococcus neoformans JEC21   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 505 148
No Yes Homo sapiens (NCBI version) Human 303 75
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 220 45
No Yes Heliconius numata (Incomplete)   12 9
No Yes Loa loa v3.3 (Request) Eye worm 74 20
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 63 26
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 55 14
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 219 45
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 212 44
No Yes Gorilla gorilla 69_3.1 Western gorilla 191 46
No Yes Pongo abelii 69_2 Sumatran orangutan 201 44
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 188 47
No Yes Macaca mulatta 69_1 Rhesus monkey 192 45
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 216 49
No Yes Otolemur garnettii 69_3 Small-eared galago 202 43
No Yes Microcebus murinus 69_1 Gray mouse lemur 178 42
No Yes Rattus norvegicus 69_3.4 Norway rat 203 51
No Yes Mus musculus 69_38 House mouse 222 47
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 182 41
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 193 41
No Yes Cavia porcellus 69_3 Domestic guinea pig 199 49
No Yes Oryctolagus cuniculus 69_2 Rabbit 202 46
No Yes Ochotona princeps 69 American pika 188 39
No Yes Tupaia belangeri 69 Northern tree shrew 156 37
No Yes Sus scrofa 69_10.2 Pig 143 48
No Yes Bos taurus 69_3.1 Cattle 205 47
No Yes Vicugna pacos 69_1 Alpaca 117 23
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 196 45
No Yes Mustela putorius furo 69_1.0 Domestic ferret 230 46
No Yes Ailuropoda melanoleuca 69_1 Giant panda 224 48
No Yes Canis familiaris 69_3.1 Dog 243 49
No Yes Felis catus 69 Domestic cat 141 37
No Yes Equus caballus 69_2 Horse 223 52
No Yes Myotis lucifugus 69_2.0 Little brown bat 183 43
No Yes Pteropus vampyrus 69_1 Large flying fox 203 43
No Yes Sorex araneus 69_1 European shrew 106 25
No Yes Erinaceus europaeus 69 Western European hedgehog 139 33
No Yes Procavia capensis 69_1 Cape rock hyrax 174 36
No Yes Loxodonta africana 69_3 African savanna elephant 187 43
No Yes Echinops telfairi 69 Small Madagascar hedgehog 144 32
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 144 28
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 117 25
No Yes Macropus eugenii 69_1.0 Tammar wallaby 183 39
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 181 44
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 212 48
No Yes Ornithorhynchus anatinus 69_5 Platypus 175 47
No Yes Petromyzon marinus 69_7.0 Sea lamprey 168 21
No Yes Meleagris gallopavo 69_2 Turkey 169 44
No Yes Gallus gallus 69_2 Chicken 171 37
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 187 40
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 175 46
No Yes Anolis carolinensis 69_2.0 Green anole 223 47
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 220 53
No Yes Latimeria chalumnae 69_1 Coelacanth 192 43
No Yes Gadus morhua 69_1 Atlantic cod 237 47
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 307 53
No Yes Takifugu rubripes 69_4 Torafugu 272 48
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 314 55
No Yes Oryzias latipes 69_1 Japanese medaka 275 44
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 308 56
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 337 58
No Yes Danio rerio 69_9 Zebrafish 342 61
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 155 51
No Yes Ciona intestinalis 69 Vase tunicate 143 62
No Yes Drosophila melanogaster 69_5 Fruit fly 168 35
No Yes Caenorhabditis elegans 69_215 Roundworm 126 26
No Yes 1_Upper_euphotic (meta-genome)   3 2
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   143684 28917
No Yes Protozoadb 2010_08 (Protozoadb)   18 14
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   10524 2529
No Yes Uniprot 2018_03 genome   103788 23713
No Yes Global Ocean Sampling Expedition (GOS)   193 113
No Yes PDB chains (SCOP 1.75) (PDB)   26 18
No Yes Protein Data Bank (all PDB sequenc)   207 160
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   244 244
No Yes TargetDB (Targets)   96 34

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