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  Home > Genomes > Oryza meridionalis 22 > F-box domain domains


F-box domain superfamily domain assignments
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Oryza meridionalis 22

Assignment details

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Oryza meridionalis 22 has 732 significant domains in 633 proteins.

     

Sequence ID   Evalue   Region   Family  
OMERI01G01710.1   0.0000719   51-93   F-box domain  
OMERI01G01920.1   0.00000536   70-115   F-box domain  
OMERI01G03180.1   0.000000000249   6-70   F-box domain  
OMERI01G03190.1   0.00000000000667   3-69   F-box domain  
OMERI01G03250.1   0.00000000000536   2-72   F-box domain  
OMERI01G03510.1   0.00000000314   489-552   F-box domain  
OMERI01G04110.1   0.00000000000419   25-104   F-box domain  
OMERI01G05700.1   0.0000113   32-76   F-box domain  
OMERI01G05850.1   0.000000324   4-78   F-box domain  
OMERI01G05850.2   0.000000284   4-78   F-box domain  
OMERI01G07480.1   0.00000000262   138-205   F-box domain  
OMERI01G09380.1   0.00000654   5-36   F-box domain  
OMERI01G11250.1   0.00000000000406   88-151   F-box domain  
OMERI01G11860.1   0.00000000314   9-54   F-box domain  
OMERI01G11880.1   0.0000000563   402-447   F-box domain  
OMERI01G11920.1   0.000000000929   15-68   F-box domain  
OMERI01G11920.2   0.000000000929   15-68   F-box domain  
OMERI01G14250.1   0.000000000536   13-59   F-box domain  
OMERI01G14290.1   0.00000000632   15-82   F-box domain  
OMERI01G14300.1   0.00000000229   23-76   F-box domain  
OMERI01G15510.1   0.0000000109   8-65   F-box domain  
OMERI01G15510.2   0.00000000981   8-66   F-box domain  
OMERI01G15510.3   0.00000000916   8-66   F-box domain  
OMERI01G16130.1   0.0000000785   2-42   F-box domain  
OMERI01G16290.1   0.00000353   5-53   F-box domain  
OMERI01G17050.1   9.29e-16   89-173   F-box domain  
OMERI01G17150.1   0.00000000942   66-107   F-box domain  
OMERI01G18050.1   0.0000288   28-72   F-box domain  
OMERI01G18770.1   0.000000523   314-357   F-box domain  
OMERI01G18820.1   0.00000392   72-122   F-box domain  
OMERI01G19270.1   0.00000000000327   39-119   F-box domain  
OMERI01G22200.1   0.00000000000000157   60-160   F-box domain  
OMERI01G22200.2   0.00000000000000157   60-160   F-box domain  
OMERI01G22200.3   6.11e-16   50-150   F-box domain  
OMERI01G22200.4   8.5e-16   50-150   F-box domain  
OMERI01G22200.5   8.9e-16   60-160   F-box domain  
OMERI01G22260.1   0.0000602   5-47   F-box domain  
OMERI01G23020.1   0.0000262   5-45   F-box domain  
OMERI01G23830.1   0.000000000034   36-78   F-box domain  
OMERI01G23860.1   0.00000157   14-71   F-box domain  
OMERI01G23860.2   0.00000157   14-71   F-box domain  
OMERI01G25380.2   0.0000746   34-73   F-box domain  
OMERI01G25380.3   0.0000693   34-73   F-box domain  
OMERI01G25380.4   0.0000693   34-73   F-box domain  
OMERI01G25620.1   0.000051   24-86   F-box domain  
OMERI01G26210.1   0.000000034   47-89   F-box domain  
OMERI01G27010.1   0.00000000111   106-161   F-box domain  
OMERI01G27990.1   0.0000109   48-91   F-box domain  
OMERI01G27990.2   0.0000109   48-91   F-box domain  
OMERI01G28740.1   0.0000000222   13-60   F-box domain  
OMERI01G29940.1   0.00000000089   12-92   F-box domain  
OMERI01G30390.1   0.00000000118   19-67   F-box domain  
  0.0000576   504-547   F-box domain  
OMERI01G30390.2   0.00000000119   19-67   F-box domain  
  0.0000576   497-540   F-box domain  
OMERI01G31140.1   0.00000000278   279-332   F-box domain  
OMERI01G31470.1   0.0000000628   10-53   F-box domain  
OMERI01G31630.1   0.00000000327   4-65   F-box domain  
OMERI01G34050.1   0.000000733   16-52   F-box domain  
OMERI01G34050.2   0.000000746   51-87   F-box domain  
OMERI01G34460.1   0.000000115   2-53   F-box domain  
OMERI01G34860.1   0.00000301   52-103   F-box domain  
OMERI01G35460.1   0.00000000222   7-53   F-box domain  
OMERI01G38630.1   0.0000000641   51-105   F-box domain  
OMERI01G39410.1   0.000000113   142-190   F-box domain  
OMERI01G40010.1   0.000000379   5-46   F-box domain  
OMERI01G40020.1   0.00000406   5-46   F-box domain  
OMERI01G40420.1   0.000000484   230-272   F-box domain  
OMERI01G40420.2   0.000000484   230-272   F-box domain  
OMERI02G00550.1   0.000000017   82-154   F-box domain  
OMERI02G00550.2   0.0000000111   52-124   F-box domain  
OMERI02G00550.3   0.0000000126   25-97   F-box domain  
OMERI02G01280.1   0.000000000000327   5-49   F-box domain  
OMERI02G01290.1   0.000000000458   18-64   F-box domain  
OMERI02G02970.1   0.0000000772   12-63   F-box domain  
OMERI02G03120.1   0.000000000000968   3-81   F-box domain  
OMERI02G03240.1   0.000000000012   3-50   F-box domain  
OMERI02G04390.1   0.00000000034   9-60   F-box domain  
OMERI02G04650.1   0.00000000183   7-77   F-box domain  
OMERI02G04650.2   0.00000000183   7-77   F-box domain  
OMERI02G04760.1   0.000000000000275   200-259   F-box domain  
OMERI02G05360.1   0.00000085   18-59   F-box domain  
OMERI02G05420.1   0.00000000102   12-61   F-box domain  
OMERI02G07670.1   0.00000000000157   19-73   F-box domain  
OMERI02G08550.1   0.0000000209   21-87   F-box domain  
OMERI02G08560.1   0.000000000122   10-65   F-box domain  
OMERI02G08630.1   0.000000249   65-107   F-box domain  
OMERI02G11480.1   0.00000000283   10-67   F-box domain  
OMERI02G11800.1   3.92e-16   41-144   F-box domain  
OMERI02G11800.2   3.92e-16   41-144   F-box domain  
OMERI02G12440.1   0.000000353   14-57   F-box domain  
OMERI02G13240.1   0.000000000349   21-89   F-box domain  
OMERI02G13250.1   0.00000000275   25-77   F-box domain  
OMERI02G13260.1   0.000000000144   26-76   F-box domain  
OMERI02G13500.1   0.00000000196   37-86   F-box domain  
OMERI02G14170.1   0.000013   24-65   F-box domain  
OMERI02G16340.1   0.00000000114   1261-1313   F-box domain  
  0.00000000115   1997-2050   F-box domain  
OMERI02G16340.2   0.00000000113   1234-1286   F-box domain  
  0.00000000114   1970-2023   F-box domain  
OMERI02G16340.3   0.00000000113   1231-1283   F-box domain  
  0.00000000114   1967-2020   F-box domain  
OMERI02G16340.4   0.00000000113   1218-1270   F-box domain  
  0.00000000113   1954-2007   F-box domain  
OMERI02G17260.1   0.000000000209   18-87   F-box domain  
OMERI02G17280.1   0.00000000000589   7-88   F-box domain  
OMERI02G17290.1   0.0000000196   18-69   F-box domain  
OMERI02G18490.1   0.0000000000628   6-59   F-box domain  
OMERI02G18540.1   0.00000000955   17-62   F-box domain  
OMERI02G18540.2   0.00000000955   17-62   F-box domain  
OMERI02G18880.1   0.0000000327   95-152   F-box domain  
OMERI02G19740.1   0.0000000000667   22-69   F-box domain  
OMERI02G19750.1   0.00000000916   353-411   F-box domain  
OMERI02G20280.1   0.0000409   42-82   F-box domain  
OMERI02G20280.2   0.0000768   42-82   F-box domain  
OMERI02G23510.1   0.000000000314   116-162   F-box domain  
OMERI02G23530.1   0.00000000000012   3-72   F-box domain  
OMERI02G25140.1   0.000000589   48-118   F-box domain  
OMERI02G25690.1   0.0000719   24-81   F-box domain  
OMERI02G25900.1   0.000000144   16-62   F-box domain  
OMERI02G25920.1   0.00000445   4-41   F-box domain  
OMERI02G26140.1   0.0000000000432   13-70   F-box domain  
OMERI02G26610.1   6.64e-19   2-75   F-box domain  
OMERI02G27050.1   0.000000867   36-81   F-box domain  
OMERI02G27510.1   0.00000164   8-105   F-box domain  
OMERI02G27630.1   0.00000349   59-113   F-box domain  
OMERI02G28140.1   0.000000000116   8-53   F-box domain  
OMERI02G32280.1   0.000000000000563   21-93   F-box domain  
OMERI02G32340.1   0.0000109   5-49   F-box domain  
OMERI02G34070.1   0.000000000000406   24-75   F-box domain  
OMERI02G34090.1   0.0000000000000719   276-354   F-box domain  
  0.0000000000222   35-111   F-box domain  
OMERI02G34090.2   0.000000000000068   253-331   F-box domain  
  0.0000000000262   12-88   F-box domain  
OMERI02G34090.3   0.00000000000288   285-363   F-box domain  
  0.000000000602   22-90   F-box domain  
OMERI02G34090.4   0.0000000000000719   276-354   F-box domain  
  0.0000000000222   35-111   F-box domain  
OMERI02G34090.5   0.00000000000301   260-338   F-box domain  
  0.000000000641   4-65   F-box domain  
OMERI02G34090.6   0.00000067   10-59   F-box domain  
OMERI02G34090.7   0.00000067   10-59   F-box domain  
OMERI02G35120.1   0.000000131   432-477   F-box domain  
  0.000262   14-50   F-box domain  
OMERI02G35120.2   0.000000144   473-518   F-box domain  
  0.000000615   14-55   F-box domain  
OMERI02G35140.1   0.0000000536   228-285   F-box domain  
  0.0000000746   75-116   F-box domain  
  0.0000000863   16-57   F-box domain  
OMERI02G35150.1   0.0000000929   16-57   F-box domain  
OMERI02G35220.1   0.000000222   946-984   F-box domain  
  0.000000288   20-56   F-box domain  
OMERI03G01130.1   0.000000000213   17-81   F-box domain  
OMERI03G01140.1   0.00000000164   7-74   F-box domain  
OMERI03G02570.1   0.0000000196   10-56   F-box domain  
OMERI03G02570.2   0.0000000235   5-56   F-box domain  
OMERI03G02720.1   0.0000011   11-46   F-box domain  
OMERI03G04740.1   0.00000000366   75-162   F-box domain  
OMERI03G06190.1   0.000000576   14-58   F-box domain  
OMERI03G06740.1   0.0000000000000222   39-81   F-box domain  
OMERI03G07240.1   0.0000000196   74-122   F-box domain  
OMERI03G08760.1   0.0000000000000288   334-403   F-box domain  
OMERI03G15720.1   0.000000089   4-57   F-box domain  
OMERI03G15720.2   0.000000157   4-55   F-box domain  
OMERI03G16180.1   0.00000000000249   7-54   F-box domain  
OMERI03G16410.1   0.00000183   53-94   F-box domain  
OMERI03G16410.2   0.0000811   50-87   F-box domain  
OMERI03G16410.3   0.0000968   50-87   F-box domain  
OMERI03G16410.4   0.00000222   53-94   F-box domain  
OMERI03G16410.5   0.0000017   53-94   F-box domain  
OMERI03G16780.1   0.000000000942   145-196   F-box domain  
OMERI03G16840.1   7.98e-16   19-69   F-box domain  
OMERI03G17090.1   0.0000000275   44-80   F-box domain  
OMERI03G17370.1   0.0000000000000981   287-346   F-box domain  
OMERI03G17390.1   0.000000000000549   7-56   F-box domain  
OMERI03G17470.1   0.00000000000000497   15-95   F-box domain  
OMERI03G18080.1   0.000000000314   55-109   F-box domain  
OMERI03G18090.1   0.0000000000432   40-106   F-box domain  
OMERI03G18100.1   0.00000000419   27-85   F-box domain  
OMERI03G18110.1   0.0000458   5-48   F-box domain  
OMERI03G19640.1   3.4e-18   4-96   F-box domain  
OMERI03G20800.1   0.0000000000432   4-68   F-box domain  
OMERI03G20800.2   0.0000000000327   4-68   F-box domain  
OMERI03G22500.1   0.0000000249   31-67   F-box domain  
OMERI03G23320.1   0.00000379   37-76   F-box domain  
OMERI03G23670.1   0.00000000000000955   8-70   F-box domain  
OMERI03G23680.1   0.000013   4-50   F-box domain  
OMERI03G24530.1   0.000000000000968   10-79   F-box domain  
OMERI03G24930.1   0.000000000085   6-71   F-box domain  
OMERI03G24970.1   0.0000000000249   8-55   F-box domain  
OMERI03G26110.1   0.000000000000392   5-68   F-box domain  
OMERI03G26410.1   0.00000000301   39-84   F-box domain  
OMERI03G26420.1   0.000000183   239-285   F-box domain  
OMERI03G26430.1   0.00000262   12-59   F-box domain  
OMERI03G26730.1   0.0000157   4-52   F-box domain  
OMERI03G28160.1   0.000000196   75-128   F-box domain  
OMERI03G28160.2   0.000000144   75-128   F-box domain  
OMERI03G28160.3   0.000000275   9-60   F-box domain  
OMERI03G28160.4   0.000000379   9-60   F-box domain  
OMERI03G28540.1   0.0000000157   2-37   F-box domain  
OMERI03G29580.1   0.0000000000235   9-56   F-box domain  
OMERI03G29670.1   0.0000000000000249   21-70   F-box domain  
OMERI03G29680.1   0.00000000144   134-195   F-box domain  
  0.0000000419   12-56   F-box domain  
OMERI03G29800.1   0.00000275   56-103   F-box domain  
OMERI03G29800.2   0.00000549   60-98   F-box domain  
OMERI03G32520.1   0.000000785   5-47   F-box domain  
OMERI03G34410.1   0.000000011   173-230   F-box domain  
OMERI03G37830.1   0.0000000589   11-49   F-box domain  
OMERI03G37830.3   0.0000000549   11-49   F-box domain  
OMERI04G03100.1   0.000000000131   10-69   F-box domain  
  0.00000000288   357-421   F-box domain  
OMERI04G03170.1   0.0000000000051   15-77   F-box domain  
OMERI04G03200.1   0.00000000000301   13-71   F-box domain  
OMERI04G03670.1   0.000000000157   8-61   F-box domain  
OMERI04G03700.1   0.00000000000144   3-63   F-box domain  
OMERI04G03710.1   0.00000000000432   13-83   F-box domain  
OMERI04G04470.1   0.00000000000536   8-58   F-box domain  
OMERI04G06210.1   0.00000000107   19-78   F-box domain  
OMERI04G06360.1   0.000017   103-145   F-box domain  
OMERI04G06910.1   0.00000136   50-115   F-box domain  
OMERI04G08340.1   0.0000371   45-96   F-box domain  
OMERI04G09600.1   0.000000000198   4-67   F-box domain  
OMERI04G10570.1   3.01e-18   60-138   F-box domain  
OMERI04G10570.2   4.58e-18   60-138   F-box domain  
OMERI04G11250.1   0.000000000000249   36-91   F-box domain  
OMERI04G11300.1   0.000000000301   15-62,91-104   F-box domain  
OMERI04G11760.1   0.000000034   94-130   F-box domain  
OMERI04G11760.2   0.0000000301   48-84   F-box domain  
OMERI04G11760.3   0.0000000288   30-66   F-box domain  
OMERI04G11940.1   0.00000632   148-203   F-box domain  
OMERI04G12790.1   0.0000000105   59-111   F-box domain  
OMERI04G13110.1   0.000000000576   3-44   F-box domain  
  0.00000000445   474-514   F-box domain  
OMERI04G13210.1   0.00000343   200-243   F-box domain  
OMERI04G13220.1   0.00000366   23-83   F-box domain  
OMERI04G13250.1   0.0000000000314   3-39   F-box domain  
OMERI04G14340.1   0.000000000916   23-68   F-box domain  
OMERI04G14640.1   0.000000000916   23-68   F-box domain  
OMERI04G17520.1   0.0000000122   17-65   F-box domain  
OMERI04G17520.2   0.0000000122   17-65   F-box domain  
OMERI04G17980.1   0.0000000000392   16-74   F-box domain  
OMERI04G17980.2   0.0000000000392   16-74   F-box domain  
OMERI04G20620.1   0.00000000000000157   87-178   F-box domain  
OMERI04G20620.2   0.00000000000000183   68-159   F-box domain  
OMERI04G21070.1   0.000000119   66-117   F-box domain  
OMERI04G21070.2   0.000000013   36-93   F-box domain  
OMERI04G21070.3   0.0000000772   36-88   F-box domain  
OMERI04G21070.4   0.0000000392   38-87   F-box domain  
OMERI04G22650.1   0.0000000235   34-85   F-box domain  
OMERI04G22990.1   0.00000222   8-47   F-box domain  
OMERI04G23960.1   0.000000000000196   33-98   F-box domain  
OMERI04G24020.1   0.0000000157   75-119   F-box domain  
OMERI04G24590.1   0.000011   847-883   F-box domain  
OMERI04G25690.1   0.00000834   48-100   F-box domain  
OMERI05G00560.1   0.000000392   764-811   F-box domain  
  0.00000301   410-462   F-box domain  
OMERI05G02570.1   0.00000000000000366   12-67   F-box domain  
  0.0000000000000327   505-556   F-box domain  
OMERI05G02570.2   0.00000000000000366   12-67   F-box domain  
  0.0000000000000327   505-556   F-box domain  
OMERI05G03130.1   0.00000000353   12-69   F-box domain  
OMERI05G03140.1   0.000000275   10-67   F-box domain  
OMERI05G03400.1   0.00000824   14-53   F-box domain  
OMERI05G04710.1   0.00000000000032   15-67,100-128   F-box domain  
OMERI05G04720.1   0.00000000000000235   12-79   F-box domain  
OMERI05G08060.1   0.00000000157   25-76   F-box domain  
OMERI05G08580.1   0.00000000000000353   30-82   F-box domain  
OMERI05G08600.1   0.00000000000000353   30-82   F-box domain  
OMERI05G08960.1   0.0000000000000262   63-118,162-194   F-box domain  
OMERI05G09430.1   0.0000000706   4-49   F-box domain  
OMERI05G09750.1   9.55e-17   12-68,98-141   F-box domain  
OMERI05G11360.1   0.00000107   19-72   F-box domain  
OMERI05G11870.1   0.0000000654   57-119   F-box domain  
OMERI05G11870.2   0.0000000000000196   8-100   F-box domain  
OMERI05G11870.3   0.0000000000000262   8-100   F-box domain  
OMERI05G14110.1   0.0000157   32-76   F-box domain  
OMERI05G14110.2   0.0000157   32-76   F-box domain  
OMERI05G14760.1   0.000000471   55-103   F-box domain  
OMERI05G14820.1   0.0000000000497   603-658   F-box domain  
OMERI05G15390.1   0.000000157   10-54   F-box domain  
OMERI05G17160.1   0.0000000000000458   61-115   F-box domain  
OMERI05G17760.1   0.0000144   4-41   F-box domain  
OMERI05G18130.1   0.0000000719   7-50   F-box domain  
OMERI05G18420.1   0.000000262   40-91   F-box domain  
OMERI05G19160.1   0.00000000981   26-77   F-box domain  
OMERI05G19510.1   0.000000837   39-92   F-box domain  
OMERI05G20130.1   0.00000000000719   123-210   F-box domain  
OMERI05G20590.1   0.0000785   11-52   F-box domain  
OMERI05G20850.1   0.0000000000209   44-103   F-box domain  
OMERI05G22970.1   0.00000000772   2-46   F-box domain  
OMERI06G00620.1   0.00000000000406   6-50   F-box domain  
OMERI06G00640.1   0.0000235   55-99   F-box domain  
OMERI06G00650.1   0.00000733   22-61   F-box domain  
OMERI06G00940.1   0.000000811   9-58   F-box domain  
OMERI06G02380.1   0.00000131   59-104   F-box domain  
OMERI06G02380.2   0.00000222   59-104   F-box domain  
OMERI06G02380.3   0.00000262   54-99   F-box domain  
OMERI06G02860.1   0.00000576   87-132   F-box domain  
OMERI06G03360.1   0.000000000000968   11-71   F-box domain  
OMERI06G03380.1   0.000000000000222   15-76   F-box domain  
OMERI06G03660.1   0.00000876   439-488   F-box domain  
OMERI06G03660.4   0.0000719   743-787   F-box domain  
OMERI06G03660.5   0.0000222   161-205   F-box domain  
OMERI06G03670.1   0.0000131   20-65   F-box domain  
OMERI06G03730.1   0.00000122   12-56   F-box domain  
OMERI06G04040.1   0.000000107   5-54   F-box domain  
OMERI06G05320.1   0.00000000144   72-120   F-box domain  
OMERI06G05530.1   1.83e-16   40-87   F-box domain  
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OMERI10G12710.1   0.000000000638   21-88   F-box domain  
OMERI10G13250.1   0.000000419   59-115   F-box domain  
OMERI11G03110.1   0.00000301   46-90   F-box domain  
OMERI11G03160.1   0.0000000000000445   19-77   F-box domain  
OMERI11G03610.1   0.00000144   43-96   F-box domain  
OMERI11G03610.2   0.00000144   43-96   F-box domain  
OMERI11G03690.1   0.0000000000000314   15-79   F-box domain  
OMERI11G04720.1   0.00000000000262   26-69   F-box domain  
OMERI11G04750.1   0.000000000118   4-53   F-box domain  
OMERI11G04750.2   0.000000000103   398-450   F-box domain  
OMERI11G04750.3   0.000000000106   421-473   F-box domain  
OMERI11G04750.4   0.000000000118   4-53   F-box domain  
OMERI11G04750.5   0.0000000000916   4-53   F-box domain  
OMERI11G04760.1   0.000000000249   536-578   F-box domain  
  0.00000000536   38-85   F-box domain  
OMERI11G04760.2   0.000000000235   488-530   F-box domain  
  0.0000000051   38-85   F-box domain  
OMERI11G04770.1   0.000000000196   20-82   F-box domain  
OMERI11G04780.1   0.0000000000706   16-59   F-box domain  
OMERI11G04790.2   0.0000000000131   77-132   F-box domain  
OMERI11G04820.1   0.00000000000144   419-487   F-box domain  
  0.000000000262   6-68   F-box domain  
OMERI11G04820.2   0.00000000000249   419-487   F-box domain  
  0.000000000275   6-68   F-box domain  
OMERI11G04820.3   0.00000000000249   419-487   F-box domain  
  0.000000000249   6-68   F-box domain  
OMERI11G04830.1   0.00000000000379   79-132   F-box domain  
  0.000000000379   746-800   F-box domain  
OMERI11G05130.1   0.0000000000131   5-48   F-box domain  
OMERI11G05160.1   0.0000000000101   3-47   F-box domain  
OMERI11G05170.1   0.0000000000615   71-114   F-box domain  
OMERI11G05210.1   0.000000000615   22-72   F-box domain  
OMERI11G05220.1   0.0000000000209   980-1051   F-box domain  
OMERI11G05220.3   0.00000000000733   980-1051   F-box domain  
OMERI11G05240.1   0.00000000000536   487-542   F-box domain  
  0.000000000183   797-843   F-box domain  
  0.00000000144   102-150   F-box domain  
OMERI11G05240.2   0.00000000000484   377-432   F-box domain  
  0.000000000157   686-733   F-box domain  
  0.00000000131   102-150   F-box domain  
OMERI11G05240.3   0.00000000000484   373-428   F-box domain  
  0.000000000144   682-729   F-box domain  
OMERI11G05240.4   0.00000000000157   9-88   F-box domain  
OMERI11G05240.5   0.00000000000288   9-87   F-box domain  
OMERI11G07160.1   0.000000589   19-62   F-box domain  
OMERI11G07910.1   0.00000304   11-86   F-box domain  
OMERI11G07950.3   0.000085   36-76   F-box domain  
OMERI11G11090.1   0.000000000235   45-107   F-box domain  
OMERI11G12460.1   0.000000000157   18-71   F-box domain  
OMERI11G12930.1   0.00000000000772   97-159   F-box domain  
OMERI11G13960.1   0.00000222   5-47   F-box domain  
OMERI11G14030.1   0.0000000000106   105-168   F-box domain  
OMERI11G14070.1   0.00000000837   27-65   F-box domain  
OMERI11G14110.2   0.0000000222   4-45   F-box domain  
OMERI11G14110.4   0.0000000458   151-185   F-box domain  
OMERI11G14190.1   0.00000000392   2-60   F-box domain  
OMERI11G14220.1   0.0000000144   2-44   F-box domain  
OMERI11G14440.1   0.0000000115   50-100   F-box domain  
OMERI11G15300.1   0.00000157   11-52   F-box domain  
OMERI11G15310.1   0.0000000157   7-43   F-box domain  
OMERI11G15360.1   0.00000000759   7-43   F-box domain  
OMERI11G15470.1   0.0000497   12-52   F-box domain  
OMERI11G15660.1   0.00000863   4-78   F-box domain  
OMERI11G17120.1   0.00000942   10-45   F-box domain  
OMERI11G17160.1   0.000000089   5-47   F-box domain  
OMERI11G17170.1   0.00000000249   9-54   F-box domain  
OMERI12G00990.1   0.0000000458   45-104   F-box domain  
  0.000000353   300-358   F-box domain  
OMERI12G02080.1   0.000000471   47-102   F-box domain  
OMERI12G02080.2   0.000000471   47-102   F-box domain  
OMERI12G02140.1   0.000000000000379   28-87   F-box domain  
OMERI12G03250.1   0.0000000000000113   77-125,175-205   F-box domain  
OMERI12G03250.2   0.0000000000000085   18-66,116-147   F-box domain  
OMERI12G07700.1   0.0000000981   15-68   F-box domain  
OMERI12G07710.1   0.000000000621   3-84   F-box domain  
OMERI12G07720.1   0.000000000474   3-84   F-box domain  
OMERI12G07730.1   0.000000154   11-65   F-box domain  
OMERI12G07940.1   0.000000107   20-77   F-box domain  
OMERI12G07970.1   0.000000000000719   17-64   F-box domain  
OMERI12G07980.1   0.000000000000536   28-78   F-box domain  
OMERI12G07990.1   0.00000000000102   22-86   F-box domain  
OMERI12G08010.1   0.0000000000000183   31-101   F-box domain  
OMERI12G08020.1   0.00000000000981   50-104   F-box domain  
OMERI12G09260.1   0.0000000144   11-66   F-box domain  
OMERI12G09730.1   0.00000000068   7-66   F-box domain  
OMERI12G09740.1   0.000000000654   23-67   F-box domain  
OMERI12G09750.1   0.0000000536   391-441   F-box domain  
OMERI12G09790.1   0.00000000118   11-68   F-box domain  
OMERI12G09800.1   0.0000000000157   5-70   F-box domain  
OMERI12G09820.1   0.000000245   2-57   F-box domain  
OMERI12G09830.1   0.0000000235   10-72   F-box domain  
OMERI12G09840.1   0.00000000103   18-62   F-box domain  
OMERI12G10060.1   0.000000144   29-98   F-box domain  
OMERI12G11130.1   0.0000000327   10-60   F-box domain  
OMERI12G12150.1   0.00000034   13-53   F-box domain  
OMERI12G12670.1   0.0000235   20-58   F-box domain  
OMERI12G13000.1   0.00000916   4-35   F-box domain  
OMERI12G13010.1   0.00000222   4-55   F-box domain  
OMERI12G13180.1   0.00000000000327   12-61   F-box domain  
OMERI12G13600.1   0.000000000116   3-60   F-box domain  
OMERI12G14950.1   0.00000000000301   2-55   F-box domain  
OMERI12G14980.1   0.0000000000235   10-68   F-box domain  
 
Weak hits:
OMERI01G04120.1   0.000147   6-49   F-box domain  
OMERI01G04120.2   0.000149   6-49   F-box domain  
OMERI01G04120.3   0.000129   6-49   F-box domain  
OMERI01G04120.4   0.000131   6-49   F-box domain  
OMERI01G14090.1   0.00567   32-84   F-box domain  
OMERI01G19250.1   0.000523   51-80   F-box domain  
OMERI01G22890.1   0.000157   3-54   F-box domain  
OMERI01G23130.1   0.000759   64-80   F-box domain  
OMERI01G25380.1   0.000144   34-73   F-box domain  
OMERI01G26000.1   0.000746   58-94   F-box domain  
OMERI01G26040.1   0.00314   5-43   F-box domain  
OMERI01G27430.1   0.000183   45-98   F-box domain  
OMERI01G28910.1   0.00222   12-53   F-box domain  
OMERI01G29090.1   0.0232   3-42   F-box domain  
OMERI01G29100.1   0.00545   3-60   F-box domain  
OMERI01G35770.1   0.00226   33-76   F-box domain  
OMERI01G35770.2   0.00226   33-76   F-box domain  
OMERI01G40030.1   0.000837   12-50   F-box domain  
OMERI01G40760.1   0.0425   4-49   F-box domain  
OMERI02G09140.5   0.0392   15-56   F-box domain  
OMERI02G11330.1   0.0128   457-505   F-box domain  
OMERI02G12080.1   0.0324   3-37   F-box domain  
OMERI02G13050.1   0.0915   31-69   F-box domain  
OMERI02G16860.1   0.0294   42-82   F-box domain  
OMERI02G16860.2   0.0245   12-52   F-box domain  
OMERI02G16860.3   0.0278   27-67   F-box domain  
OMERI02G16900.1   0.000589   35-91   F-box domain  
OMERI02G21570.1   0.0017   2-60   F-box domain  
OMERI02G27230.1   0.0719   3-50   F-box domain  
OMERI02G30950.1   0.000222   90-124   F-box domain  
OMERI02G30950.2   0.000209   90-124   F-box domain  
OMERI03G00860.1   0.000698   28-92   F-box domain  
OMERI03G05030.1   0.015   89-153   F-box domain  
OMERI03G10950.1   0.0216   17-49   F-box domain  
OMERI03G10950.2   0.0216   17-49   F-box domain  
OMERI03G19820.1   0.000414   21-90   F-box domain  
OMERI03G19830.1   0.000414   21-90   F-box domain  
OMERI03G22330.1   0.0883   16-81   F-box domain  
OMERI03G23940.1   0.000763   645-697   F-box domain  
OMERI03G26590.1   0.000602   6-36   F-box domain  
OMERI03G29650.1   0.000497   3-43   F-box domain  
OMERI03G33000.1   0.0196   3-46   F-box domain  
OMERI03G33640.1   0.000523   50-105   F-box domain  
OMERI04G02310.1   0.000213   4-49   F-box domain  
OMERI04G02340.1   0.000425   7-45   F-box domain  
OMERI04G11220.1   0.0167   7-40   F-box domain  
OMERI04G11240.1   0.000948   20-65   F-box domain  
OMERI04G20580.1   0.0425   231-318   F-box domain  
OMERI05G03350.1   0.0048   7-43   F-box domain  
OMERI05G06910.1   0.0634   5-54   F-box domain  
OMERI05G17680.1   0.00288   4-43   F-box domain  
OMERI05G17740.1   0.0589   3-38   F-box domain  
OMERI05G20570.1   0.000445   7-47   F-box domain  
OMERI05G22750.1   0.000916   3-42   F-box domain  
OMERI06G00870.1   0.00014   167-215   F-box domain  
OMERI06G00880.1   0.000106   45-86   F-box domain  
OMERI06G12920.1   0.00654   31-63   F-box domain  
OMERI06G18740.1   0.00213   6-46   F-box domain  
OMERI06G18900.1   0.0012   44-85   F-box domain  
OMERI06G21570.1   0.000144   29-65   F-box domain  
OMERI06G23660.1   0.0061   80-122   F-box domain  
OMERI06G25510.1   0.00102   56-102   F-box domain  
OMERI06G25930.1   0.000556   2-39   F-box domain  
OMERI07G04550.1   0.00676   24-72   F-box domain  
OMERI07G04560.1   0.00054   62-99   F-box domain  
OMERI07G06920.1   0.000471   20-58   F-box domain  
OMERI07G07630.1   0.000641   539-584   F-box domain  
  0.0837   140-161   F-box domain  
OMERI07G08900.1   0.0226   48-71   F-box domain  
OMERI07G08900.2   0.0144   48-71   F-box domain  
OMERI07G08930.1   0.000134   44-71   F-box domain  
OMERI07G13930.1   0.000894   5-63   F-box domain  
OMERI07G15790.1   0.000419   56-96   F-box domain  
OMERI07G16840.1   0.00741   112-162   F-box domain  
OMERI07G17100.1   0.00484   77-119   F-box domain  
OMERI08G14690.1   0.000406   37-86   F-box domain  
OMERI08G14730.1   0.000458   35-84   F-box domain  
OMERI08G15730.1   0.00132   17-63   F-box domain  
OMERI09G10620.1   0.000101   16-41   F-box domain  
OMERI09G14640.1   0.00068   11-41   F-box domain  
OMERI09G15030.1   0.00392   523-573   F-box domain  
OMERI10G01370.1   0.067   5-53   F-box domain  
OMERI10G02030.1   0.000183   11-45   F-box domain  
OMERI10G02400.1   0.015   9-62   F-box domain  
OMERI10G02400.2   0.0085   8-63   F-box domain  
OMERI10G02400.3   0.0137   9-62   F-box domain  
OMERI10G02400.4   0.0085   8-63   F-box domain  
OMERI10G05920.1   0.000203   215-247   F-box domain  
OMERI10G10900.2   0.0392   15-47   F-box domain  
OMERI10G12430.1   0.0124   3-42   F-box domain  
OMERI10G12530.1   0.00106   7-42   F-box domain  
OMERI10G12550.1   0.000301   4-41   F-box domain  
OMERI11G00990.1   0.0147   31-80   F-box domain  
OMERI11G01020.1   0.00785   16-62   F-box domain  
OMERI11G05180.1   0.00157   11-42   F-box domain  
OMERI11G05180.2   0.00157   11-42   F-box domain  
OMERI11G07860.4   0.000327   7-50   F-box domain  
OMERI11G07950.1   0.000122   37-76   F-box domain  
OMERI11G07950.2   0.00014   37-76   F-box domain  
OMERI11G10450.1   0.000628   1931-1959   F-box domain  
OMERI11G15290.1   0.000474   23-60   F-box domain  
OMERI11G15350.1   0.0654   18-41   F-box domain  
OMERI11G15500.1   0.000128   8-50   F-box domain  
OMERI12G06820.1   0.011   11-60   F-box domain  
OMERI12G07810.1   0.00632   39-64   F-box domain  
OMERI12G09610.1   0.00214   819-862   F-box domain  
OMERI12G09610.2   0.00211   819-862   F-box domain  
OMERI12G09760.1   0.0545   1-45   F-box domain  
OMERI12G10190.1   0.000126   75-113   F-box domain  
OMERI12G10220.1   0.000126   75-113   F-box domain  
OMERI12G10670.1   0.0883   17-53   F-box domain  
OMERI12G12590.1   0.00089   25-69   F-box domain  
OMERI12G12600.1   0.00632   41-92   F-box domain  
OMERI12G12650.1   0.00719   650-705   F-box domain  
OMERI12G12990.1   0.000124   8-48   F-box domain  
  0.0314   426-459   F-box domain  
OMERI12G14910.1   0.0144   48-69   F-box domain  
  0.0706   192-211   F-box domain  
OMERI12G15000.1   0.00032   3-51   F-box domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   314678 314678
No Yes Homo sapiens 76_38 Human 192 192
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 59 59
No Yes Gorilla gorilla 76_3.1 Western gorilla 81 81
No Yes Pongo abelii 76_2 Sumatran orangutan 63 63
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 68 68
No Yes Papio anubis 76 Olive baboon 67 67
No Yes Macaca mulatta 76_1 Rhesus monkey 89 89
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 124 124
No Yes Otolemur garnettii 76_3 Small-eared galago 67 67
No Yes Microcebus murinus 76_1 Gray mouse lemur 39 39
No Yes Rattus norvegicus 76_5.0 Norway rat 64 64
No Yes Mus musculus 76_38 House mouse 162 162
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 48 48
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 55 55
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 60 60
No Yes Cavia porcellus 76_3 Domestic guinea pig 61 61
No Yes Oryctolagus cuniculus 76_2 Rabbit 59 59
No Yes Ochotona princeps 76 American pika 45 45
No Yes Tupaia belangeri 76 Northern tree shrew 29 29
No Yes Sus scrofa 76_10.2 Pig 59 59
No Yes Bos taurus 76_3.1 Cattle 71 71
No Yes Ovis aries 76_3.1 Sheep 68 68
No Yes Vicugna pacos 76_1 Alpaca 30 30
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 51 51
No Yes Mustela putorius furo 76_1.0 Domestic ferret 60 60
No Yes Ailuropoda melanoleuca 76_1 Giant panda 64 64
No Yes Canis familiaris 76_3.1 Dog 73 73
No Yes Felis catus 76_6.2 Domestic cat 61 61
No Yes Equus caballus 76_2 Horse 56 56
No Yes Myotis lucifugus 76_2.0 Little brown bat 141 141
No Yes Pteropus vampyrus 76_1 Large flying fox 57 57
No Yes Sorex araneus 76_1 European shrew 34 34
No Yes Erinaceus europaeus 76 Western European hedgehog 44 44
No Yes Procavia capensis 76_1 Cape rock hyrax 41 41
No Yes Loxodonta africana 76_3 African savanna elephant 78 78
No Yes Echinops telfairi 76 Small Madagascar hedgehog 35 35
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 64 64
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 26 26
No Yes Macropus eugenii 76_1.0 Tammar wallaby 34 34
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 57 57
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 65 65
No Yes Ornithorhynchus anatinus 76_5 Platypus 45 45
No Yes Saccoglossus kowalevskii v3.0   110 110
No Yes Petromyzon marinus 76_7.0 Sea lamprey 28 28
No Yes Meleagris gallopavo 76_2 Turkey 44 44
No Yes Gallus gallus 76_4 Chicken 50 50
No Yes Anas platyrhynchos 76_1.0 Mallard 45 45
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 51 51
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 51 51
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 60 60
No Yes Anolis carolinensis 76_2.0 Green anole 57 57
No Yes Xenopus laevis African clawed frog 104 104
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 66 66
No Yes Latimeria chalumnae 76_1 Coelacanth 74 74
No Yes Lepisosteus oculatus 76 Spotted gar 75 75
No Yes Gadus morhua 76_1 Atlantic cod 60 60
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 63 63
No Yes Takifugu rubripes 76_4 Torafugu 107 107
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 73 73
No Yes Oryzias latipes 76_1 Japanese medaka 64 64
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 72 72
No Yes Poecilia formosa 76 Amazon molly 72 72
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 87 87
No Yes Astyanax mexicanus 76 Mexican tetra 61 61
No Yes Danio rerio 76_9 Zebrafish 121 121
No Yes Oikopleura dioica   26 26
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 26 26
No Yes Ciona intestinalis 76 Vase tunicate 30 30
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 56 56
No Yes Adineta vaga   212 211
No Yes Octopus bimaculoides 280   55 55
No Yes Crassostrea gigas 22 Pacific oyster 52 52
No Yes Lottia gigantea Owl limpet 59 59
No Yes Helobdella robusta   33 33
No Yes Capitella sp. I   55 55
No Yes Danaus plexippus OGS1.0 Monarch butterfly 34 33
No Yes Heliconius melpomene Postman butterfly 29 29
No Yes Bombyx mori Domestic silkworm 14 14
No Yes Nasonia vitripennis Jewel wasp 35 33
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 44 44
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 26 26
No Yes Linepithema humile v1.1 Argentine ant 30 30
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 30 30
No Yes Solenopsis invicta v.2.2.3 Red fire ant 41 41
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 28 28
No Yes Atta cephalotes v1.1   27 27
No Yes Camponotus floridanus v3.3 Florida carpenter ant 30 30
No Yes Lucilia cuprina Australian sheep blowfly 26 26
No Yes Drosophila grimshawi 1.3   28 28
No Yes Drosophila willistoni 1.3   32 32
No Yes Drosophila pseudoobscura 2.13   27 27
No Yes Drosophila persimilis 1.3   28 28
No Yes Drosophila suzukii   31 28
No Yes Drosophila yakuba 1.3   25 25
No Yes Drosophila simulans 1.3   27 27
No Yes Drosophila sechellia 1.3   26 26
No Yes Drosophila melanogaster 76_5 Fruit fly 56 56
No Yes Drosophila erecta 1.3   25 25
No Yes Drosophila ananassae 1.3   28 28
No Yes Drosophila virilis 1.2   29 29
No Yes Drosophila mojavensis 1.3   28 28
No Yes Megaselia scalaris 22   10 10
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 46 46
No Yes Culex pipiens quinquefasciatus Southern house mosquito 150 149
No Yes Anopheles darlingi 22 American malaria mosquito 27 25
No Yes Anopheles gambiae 49_3j African malaria mosquito 33 33
No Yes Tribolium castaneum 3.0 Red flour beetle 33 33
No Yes Pediculus humanus corporis (Early assembly) Human body louse 31 31
No Yes Acyrthosiphon pisum Pea aphid 24 24
No Yes Rhodnius prolixus 22   41 41
No Yes Daphnia pulex Common water flea 70 70
No Yes Strigamia maritima 22   36 36
No Yes Sarcoptes scabiei   10 10
No Yes Tetranychus urticae Two-spotted spider mite 82 82
No Yes Ixodes scapularis (Preliminary) Black-legged tick 43 43
No Yes Pristionchus pacificus   69 69
No Yes Meloidogyne incognita Southern root-knot nematode 110 105
No Yes Meloidogyne hapla   56 56
No Yes Onchocerca volvulus 22   35 35
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 35 35
No Yes Caenorhabditis japonica   21 21
No Yes Caenorhabditis brenneri   108 107
No Yes Caenorhabditis remanei   125 122
No Yes Caenorhabditis elegans 76_235 Roundworm 116 116
No Yes Caenorhabditis briggsae 2   44 44
No Yes Trichinella spiralis 22   19 19
No Yes Hymenolepis microstoma   19 19
No Yes Echinococcus multilocularis   17 17
No Yes Echinococcus granulosus   16 16
No Yes Taenia solium Pork tapeworm 17 17
No Yes Schistosoma mansoni   29 29
No Yes Mnemiopsis leidyi Sea walnut 33 33
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   36 36
No Yes Nematostella vectensis 1.0 Starlet sea anemone 72 72
No Yes Hydra vulgaris   23 23
No Yes Amphimedon queenslandica   32 32
No Yes Trichoplax adhaerens   41 41
No Yes Proterospongia sp. ATCC 50818   33 33
No Yes Monosiga brevicollis   20 20
No Yes Sphaeroforma arctica JP610   38 38
No Yes Capsaspora owczarzaki ATCC 30864   36 34
No Yes Conidiobolus coronatus NRRL28638 v1.0   49 49
No Yes Mortierella verticillata NRRL 6337   188 188
No Yes Phycomyces blakesleeanus   246 245
No Yes Rhizopus oryzae RA 99-880   46 46
No Yes Mucor circinelloides   111 110
No Yes Rhizomucor miehei CAU432   83 83
No Yes Malassezia globosa CBS 7966   16 16
No Yes Sporisorium reilianum 22   22 22
No Yes Ustilago maydis   21 21
No Yes Mixia osmundae IAM 14324 v1.0   27 27
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   19 19
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   16 16
No Yes Melampsora laricis-populina   17 17
No Yes Rhodotorula graminis WP1 v1.0   41 41
No Yes Sporobolomyces roseus IAM 13481   30 30
No Yes Microbotryum violaceum 22   24 24
No Yes Wallemia sebi v1.0   17 17
No Yes Sphaerobolus stellatus v1.0   205 205
No Yes Piloderma croceum F 1598 v1.0   114 114
No Yes Serpula lacrymans var. lacrymans S7.9   46 46
No Yes Coniophora puteana   121 120
No Yes Hydnomerulius pinastri v2.0   78 78
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   56 56
No Yes Pisolithus microcarpus 441 v1.0   55 55
No Yes Pisolithus tinctorius Marx 270 v1.0   74 74
No Yes Scleroderma citrinum Foug A v1.0   100 99
No Yes Coprinopsis cinerea okayama7 130 v3   179 177
No Yes Pleurotus ostreatus Oyster mushroom 116 115
No Yes Amanita thiersii Skay4041 v1.0   62 62
No Yes Amanita muscaria Koide v1.0 Fly agaric 122 122
No Yes Galerina marginata v1.0   282 282
No Yes Hebeloma cylindrosporum h7 v2.0   197 197
No Yes Laccaria bicolor S238N-H82   119 118
No Yes Agaricus bisporus var. bisporus   85 85
No Yes Schizophyllum commune   231 224
No Yes Stereum hirsutum FP-91666 SS1 v1.0   151 150
No Yes Heterobasidion annosum   59 59
No Yes Gloeophyllum trabeumv1.0   89 89
No Yes Punctularia strigosozonata v1.0   71 70
No Yes Sebacina vermifera MAFF 305830 v1.0   232 228
No Yes Fomitiporia mediterranea v1.0   84 84
No Yes Tulasnella calospora AL13/4D v1.0   306 300
No Yes Postia placenta   151 151
No Yes Wolfiporia cocos MD-104 SS10 v1.0   107 107
No Yes Fomitopsis pinicolav1.0   135 134
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   151 151
No Yes Phanerochaete chrysosporium RP-78 2.1   91 90
No Yes Dichomitus squalens   120 120
No Yes Trametes versicolor v1.0   189 188
No Yes Tremella mesenterica Witches' butter 18 18
No Yes Daldinia eschscholzii EC12 v1.0   53 53
No Yes Apiospora montagnei NRRL 25634 v1.0   75 75
No Yes Magnaporthe poae ATCC 64411 22   37 37
No Yes Magnaporthe grisea 70-15   44 44
No Yes Podospora anserina   41 41
No Yes Sporotrichum thermophile ATCC 42464   39 39
No Yes Thielavia terrestris NRRL 8126   40 40
No Yes Chaetomium globosum CBS 148.51   37 37
No Yes Neurospora tetrasperma   35 35
No Yes Neurospora discreta FGSC 8579   33 33
No Yes Neurospora crassa OR74A   36 36
No Yes Cryphonectria parasitica Chestnut blight fungus 33 33
No Yes Verticillium albo-atrum VaMs.102   21 21
No Yes Verticillium dahliae VdLs.17   36 36
No Yes Acremonium alcalophilumv 1.0   30 30
No Yes Glomerella graminicola 22   34 34
No Yes Fusarium graminearum   51 51
No Yes Nectria haematococca mpVI   75 75
No Yes Fusarium oxysporum f. sp. lycopersici 4286   36 36
No Yes Fusarium verticillioides 7600   38 38
No Yes Trichoderma asperellum CBS 433.97 v1.0   54 54
No Yes Trichoderma atroviride   55 55
No Yes Trichoderma citrinoviride v1.0   40 40
No Yes Trichoderma reesei 1.2   38 38
No Yes Trichoderma virens Gv29-8   46 46
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   38 38
No Yes Trichoderma harzianum CBS 226.95 v1.0   47 47
No Yes Amorphotheca resinae v1.0 Creosote fungus 44 44
No Yes Botrytis cinerea B05.10   30 30
No Yes Sclerotinia sclerotiorum   37 37
No Yes Blumeria graminis 22   25 25
No Yes Didymella exigua CBS 183.55 v1.0   41 41
No Yes Leptosphaeria maculans 22   35 35
No Yes Setosphaeria turcica v1.0   55 55
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   52 52
No Yes Cochliobolus victoriae FI3 v1.0   57 57
No Yes Cochliobolus carbonum 26-R-13 v1.0   54 54
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 33 33
No Yes Alternaria brassicicola   30 30
No Yes Cochliobolus lunatus m118 v2.0   54 54
No Yes Pyrenophora teres f. teres 22   42 42
No Yes Pyrenophora tritici-repentis   48 48
No Yes Stagonospora nodorum   63 62
No Yes Mycosphaerella graminicola IPO323   59 58
No Yes Zasmidium cellare ATCC 36951 v1.0   107 107
No Yes Dothistroma septosporum   57 57
No Yes Septoria musiva v1.0   47 47
No Yes Mycosphaerella fijiensis CIRAD86   70 70
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   49 49
No Yes Paracoccidioides brasiliensis Pb18   35 35
No Yes Coccidioides posadasii RMSCC 3488   45 45
No Yes Coccidioides immitis RS   50 50
No Yes Ajellomyces dermatitidis SLH14081   42 42
No Yes Histoplasma capsulatum class NAmI strain WU24   36 36
No Yes Microsporum canis CBS 113480   41 41
No Yes Trichophyton equinum CBS 127.97   32 32
No Yes Trichophyton verrucosum HKI 0517   39 39
No Yes Arthroderma benhamiae CBS 112371   37 37
No Yes Trichophyton tonsurans CBS 112818   38 38
No Yes Trichophyton rubrum CBS 118892   43 43
No Yes Uncinocarpus reesii 1704   33 33
No Yes Aspergillus zonatus v1.0   45 45
No Yes Penicillium chrysogenum Wisconsin 54-1255   67 67
No Yes Penicillium chrysogenum v1.0   61 61
No Yes Aspergillus acidus v1.0   67 67
No Yes Aspergillus fumigatus Af293   40 40
No Yes Aspergillus brasiliensis v1.0   70 70
No Yes Aspergillus nidulans FGSC A4   42 42
No Yes Aspergillus sydowii v1.0   83 83
No Yes Aspergillus versicolor v1.0   59 59
No Yes Aspergillus glaucus   65 65
No Yes Aspergillus carbonarius ITEM 5010   53 53
No Yes Neosartorya fischeri NRRL 181   45 45
No Yes Aspergillus terreus NIH2624   44 44
No Yes Aspergillus tubingensis v1.0   59 59
No Yes Aspergillus wentii v1.0   72 72
No Yes Aspergillus oryzae RIB40   43 43
No Yes Aspergillus niger 22   58 58
No Yes Aspergillus niger ATCC 1015   50 50
No Yes Aspergillus flavus NRRL3357   43 43
No Yes Aspergillus clavatus NRRL 1   45 45
No Yes Penicillium marneffei ATCC 18224   39 39
No Yes Tuber melanosporum Mel28 22   39 39
No Yes Tuber melanosporum Vittad Perigord truffle 56 56
No Yes Hansenula polymorpha v2.0   7 7
No Yes Dekkera bruxellensis CBS 2499 v2.0   10 10
No Yes Pichia membranifaciensv1.0   9 9
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   13 13
No Yes Candida dubliniensis CD36   17 17
No Yes Candida tropicalis MYA-3404   20 20
No Yes Candida parapsilosis   15 15
No Yes Candida albicans SC5314   19 19
No Yes Lodderomyces elongisporus NRRL YB-4239   13 13
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   16 16
No Yes Pichia stipitis CBS 6054   16 16
No Yes Candida guilliermondii ATCC 6260   14 14
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   12 12
No Yes Debaromyces hansenii   17 17
No Yes Wickerhamomyces anomalus   18 18
No Yes Pichia pastoris GS115   10 10
No Yes Hanseniaspora valbyensis NRRL Y-1626 v1.1   2 2
No Yes Yarrowia lipolytica CLIB122   65 65
No Yes Candida lusitaniae ATCC 42720   17 17
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   17 17
No Yes Vanderwaltozyma polyspora DSM 70294   12 12
No Yes Candida glabrata CBS138   12 12
No Yes Kluyveromyces thermotolerans CBS 6340   13 13
No Yes Lachancea kluyveri   15 15
No Yes Kluyveromyces waltii   15 15
No Yes Ashbya gossypii ATCC 10895   11 11
No Yes Zygosaccharomyces rouxii   11 11
No Yes Saccharomyces mikatae MIT   8 8
No Yes Saccharomyces paradoxus MIT   11 11
No Yes Saccharomyces cerevisiae 76 Baker's yeast 11 11
No Yes Saccharomyces bayanus MIT   10 10
No Yes Kluyveromyces lactis   16 16
No Yes Schizosaccharomyces cryophilus OY26 22   11 11
No Yes Schizosaccharomyces octosporus yFS286   11 11
No Yes Schizosaccharomyces japonicus yFS275   10 10
No Yes Schizosaccharomyces pombe Fission yeast 12 12
No Yes Catenaria anguillulae PL171 v1.0   49 48
No Yes Allomyces macrogynus ATCC 38327   57 57
No Yes Spizellomyces punctatus DAOM BR117   77 77
No Yes Dictyostelium discoideum   46 45
No Yes Dictyostelium purpureum   46 45
No Yes Entamoeba dispar 1.2   14 14
No Yes Entamoeba invadens 1.2   27 27
No Yes Entamoeba histolytica 1   14 14
No Yes Selaginella moellendorffii   304 302
No Yes Pinus taeda Loblolly pine 220 207
No Yes Picea abies Norway spruce 185 184
No Yes Eucalyptus grandis v201 Rose gum 344 344
No Yes Theobroma cacao B97-61/B2 v1 Cacao 332 318
No Yes Gossypium raimondii v221   599 599
No Yes Citrus clementina v165   400 399
No Yes Citrus sinensis v154 Sweet orange 422 419
No Yes Thellungiella halophila v173   778 778
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 763 757
No Yes Capsella rubella v183   871 870
No Yes Arabidopsis lyrata Lyrate rockcress 762 754
No Yes Arabidopsis thaliana 10 Thale cress 731 731
No Yes Carica papaya Papaya 151 151
No Yes Medicago truncatula Barrel medic 1414 1401
No Yes Phaseolus vulgaris v186 French bean 288 287
No Yes Glycine max v109 Soybean 526 526
No Yes Cucumis sativus v122 Cucumber 207 207
No Yes Fragaria vesca Wild strawberry 857 821
No Yes Malus domestica v196 Apple 650 633
No Yes Prunus persica v139 Peach 397 396
No Yes Linum usitatissimum v200 Flax 491 487
No Yes Manihot esculenta v147 Cassava 271 271
No Yes Populus trichocarpa v156 Black cottonwood 374 374
No Yes Vitis vinifera Wine grape 144 142
No Yes Mimulus guttatus v140 Spotted monkey flower 731 728
No Yes Solanum lycopersicum v.2.3 Tomato 335 329
No Yes Solanum tuberosum Potato 644 644
No Yes Actinidia chinensis Hongyang   292 284
No Yes Aquilegia coerulea v195   710 705
No Yes Triticum urartu 22   857 846
No Yes Triticum aestivum 22 Bread wheat 723 719
No Yes Aegilops tauschii 22   1307 1280
No Yes Brachypodium distachyon Stiff brome 663 657
No Yes Oryza barthii 22 African wild rice 831 680
No Yes Oryza meridionalis 22   732 633
No Yes Oryza glumaepatula 22   1055 864
No Yes Oryza glaberrima African rice 536 535
No Yes Oryza punctata 22   683 604
No Yes Oryza nivara 22   1017 857
No Yes Oryza brachyantha 22 Malo sina 248 244
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 857 847
No Yes Oryza sativa v193 Rice 850 840
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 221 221
No Yes Panicum virgatum v202 Switchgrass 1155 1148
No Yes Setaria italica v164 Foxtail millet 753 746
No Yes Zea mays subsp. mays Maize 357 357
No Yes Zea mays v181 Maize 412 412
No Yes Sorghum bicolor Sorghum 634 614
No Yes Musa balbisiana Balbis banana 293 293
No Yes Musa acuminata 22 Wild Malaysian banana 207 207
No Yes Amborella trichopoda 22   192 192
No Yes Physcomitrella patens   207 207
No Yes Coccomyxa subellipsoidea sp. C-169 v2   19 19
No Yes Asterochloris sp. Cgr/DA1pho v1.0   16 16
No Yes Chlorella variabilis sp. NC64A   60 58
No Yes Chlorella vulgaris   13 13
No Yes Volvox carteri f. nagariensis   41 41
No Yes Volvox carteri v199   44 44
No Yes Chlamydomonas reinhardtii 4.0   42 42
No Yes Ostreococcus sp. RCC809   11 11
No Yes Ostreococcus lucimarinus CCE9901   8 8
No Yes Ostreococcus tauri   11 11
No Yes Bathycoccus prasinos   12 12
No Yes Micromonas sp. RCC299   28 28
No Yes Micromonas pusilla CCMP1545 v3.0   39 39
No Yes Cyanidioschyzon merolae strain 10D 22   5 5
No Yes Cyanidioschyzon merolae   5 5
No Yes Porphyridium purpureum 02_2012   19 19
No Yes Thecamonas trahens ATCC 50062   67 66
No Yes Bigelowiella natans CCMP2755 22   30 30
No Yes Cyanophora paradoxa   237 235
No Yes Leishmania mexicana 2.4   9 9
No Yes Leishmania major strain Friedlin   8 8
No Yes Leishmania infantum JPCM5 2.4   8 8
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   7 7
No Yes Trypanosoma vivax   11 11
No Yes Trypanosoma cruzi strain CL Brener   11 11
No Yes Trypanosoma congolense 2.4   9 9
No Yes Trypanosoma brucei gambiense v4.1   13 13
No Yes Trypanosoma brucei TREU927 v4.1   10 10
No Yes Ectocarpus siliculosus   21 21
No Yes Aureococcus anophagefferens   14 14
No Yes Albugo laibachii 22   11 11
No Yes Pythium iwayamai DAOM BR242034 22   19 19
No Yes Pythium arrhenomanes ATCC 12531 22   22 22
No Yes Pythium ultimum v1.7-2   20 20
No Yes Pythium aphanidermatum DAOM BR444 22   22 22
No Yes Pythium irregulare DAOM BR486 22   28 28
No Yes Pythium vexans DAOM BR484 22   24 24
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 25 25
No Yes Phytophthora sojae 1.1   28 28
No Yes Phytophthora infestans T30-4   31 31
No Yes Phytophthora capsici   22 22
No Yes Hyaloperonospora arabidopsidis 22   14 14
No Yes Phaeodactylum tricornutumCCAP 1055/1   17 17
No Yes Fragilariopsis cylindrus   48 47
No Yes Thalassiosira pseudonana CCMP1335   19 18
No Yes Perkinsus marinus ATCC 50983   6 6
No Yes Paramecium tetraurelia   10 10
No Yes Tetrahymena thermophila SB210 1   11 11
No Yes Ichthyophthirius multifiliis strain G5   3 3
No Yes Cryptosporidium muris   4 4
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   7 7
No Yes Toxoplasma gondii VEG   8 8
No Yes Toxoplasma gondii ME49   7 7
No Yes Toxoplasma gondii GT1   6 6
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   3 3
No Yes Symbiodinium minutum clade B1 v1.2   29 29
No Yes Naegleria gruberi   272 272
No Yes Trichomonas vaginalis   2 2
No Yes Guillardia theta CCMP2712 v1.0   31 31
No Yes Emiliania huxleyi CCMP1516   133 133
No Yes Candidatus Amoebophilus asiaticus 5a2   15 15
No Yes Waddlia chondrophila WSU 86-1044   2 2
No Yes Candidatus Protochlamydia amoebophila UWE25   12 11
No Yes Parachlamydia acanthamoebae UV-7   26 26
No Yes Babela massiliensis   1 1
No Yes Burkholderia rhizoxinica HKI 454   9 9
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Coxiella burnetii Dugway 5J108-111   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   2 2
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 127 127
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 43 43
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 35 35
No Yes Ascaris suum Victoria/Ghent Pig roundworm 37 37
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 112 111
No Yes Cryptococcus neoformans var. grubii H99   20 20
No Yes Cryptococcus neoformans B-3501A   20 20
No Yes Cryptococcus neoformans JEC21   16 16
No Yes Paracoccidioides brasiliensis Pb01   31 31
No Yes Paracoccidioides brasiliensis Pb03   34 34
No Yes Coccidioides posadasii str. Silveira   48 48
No Yes Coccidioides immitis RMSCC 3703   35 35
No Yes Coccidioides immitis RMSCC 2394   46 46
No Yes Coccidioides immitis H538.4   40 40
No Yes Ajellomyces dermatitidis ER-3   39 39
No Yes Histoplasma capsulatum H143   38 38
No Yes Histoplasma capsulatum H88   39 39
No Yes Histoplasma capsulatum G186AR   39 39
No Yes Aspergillus fumigatus A1163   46 46
No Yes Candida albicans WO-1   16 16
No Yes Saccharomyces cerevisiae UC5   8 8
No Yes Saccharomyces cerevisiae PW5   8 8
No Yes Saccharomyces cerevisiae FL100   5 5
No Yes Saccharomyces cerevisiae CLIB324   4 4
No Yes Saccharomyces cerevisiae CBS7960   7 7
No Yes Saccharomyces cerevisiae YJM269   8 8
No Yes Saccharomyces cerevisiae T7   9 9
No Yes Saccharomyces cerevisiae FostersB   9 9
No Yes Saccharomyces cerevisiae FostersO   7 7
No Yes Saccharomyces cerevisiae VL3   8 8
No Yes Saccharomyces cerevisiae Vin13   10 10
No Yes Saccharomyces cerevisiae LalvinQA23   8 8
No Yes Saccharomyces cerevisiae AWRI796   9 9
No Yes Saccharomyces cerevisiae Sigma1278b   10 10
No Yes Saccharomyces cerevisiae W303   10 10
No Yes Saccharomyces cerevisiae JAY291   10 10
No Yes Saccharomyces cerevisiae AWRI1631   3 3
No Yes Saccharomyces cerevisiae YPS163   2 2
No Yes Saccharomyces cerevisiae M22   5 5
No Yes Saccharomyces cerevisiae T73   2 2
No Yes Saccharomyces cerevisiae CLIB215   6 6
No Yes Saccharomyces cerevisiae Y10   2 2
No Yes Saccharomyces cerevisiae YJM789   11 11
No Yes Saccharomyces cerevisiae YJM789   11 11
No Yes Saccharomyces cerevisiae RM11-1a   11 11
No Yes Saccharomyces cerevisiae RM11-1a   11 11
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 10 10
No Yes Schizosaccharomyces pombe 972h-   12 12
No Yes Batrachochytrium dendrobatidis JEL423   28 28
No Yes Batrachochytrium dendrobatidis JAM81   25 25
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 297 285
No Yes Hordeum vulgare 22 Domesticated barley 641 639
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 822 801
No Yes Trypanosoma brucei Lister 427 v4.1   11 11
No Yes Neospora caninum Nc-Liverpool 6.2   7 7
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   3 3
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Coxiella burnetii CbuG_Q212   1 1
No Yes Coxiella burnetii RSA 331   1 1
No Yes Coxiella burnetii RSA 493   1 1
No Yes Legionella pneumophila str. Paris   4 4
No Yes Legionella pneumophila str. Lens   3 3
No Yes Legionella pneumophila subsp. pneumophila LPE509   4 4
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   4 4
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   4 4
No Yes Legionella pneumophila subsp. pneumophila   4 4
No Yes Legionella pneumophila subsp. pneumophila   3 3
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   4 4
No Yes Legionella pneumophila 2300/99 Alcoy   2 2
No Yes Homo sapiens 75_37 (old version GRC) Human 200 200
No Yes Homo sapiens (NCBI version) Human 102 102
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 77 77
No Yes Heliconius numata (Incomplete)   2 2
No Yes Loa loa v3.3 (Request) Eye worm 38 38
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 29 28
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 27 27
No Yes Moniliophthora perniciosa FA553 (Genome survey)   32 32
No Yes Encephalitozoon cuniculi (endoparasite)   1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 20 20
No Yes Lotus japonicus (Early assembly)   463 461
No Yes Malus x domestica (Duplicate) Apple 650 633
No Yes Ricinus communis (Early assembly) Castor bean 194 194
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   446 442
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 330 324
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 335 329
No Yes Phoenix dactylifera (Early draft) Date palm 54 54
No Yes Homo sapiens 69_37 Human 68 68
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 59 59
No Yes Gorilla gorilla 69_3.1 Western gorilla 60 60
No Yes Pongo abelii 69_2 Sumatran orangutan 60 60
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 57 57
No Yes Macaca mulatta 69_1 Rhesus monkey 58 58
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 58 58
No Yes Otolemur garnettii 69_3 Small-eared galago 64 64
No Yes Microcebus murinus 69_1 Gray mouse lemur 39 39
No Yes Rattus norvegicus 69_3.4 Norway rat 67 67
No Yes Mus musculus 69_38 House mouse 78 78
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 48 48
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 51 51
No Yes Cavia porcellus 69_3 Domestic guinea pig 58 58
No Yes Oryctolagus cuniculus 69_2 Rabbit 54 54
No Yes Ochotona princeps 69 American pika 45 45
No Yes Tupaia belangeri 69 Northern tree shrew 29 29
No Yes Sus scrofa 69_10.2 Pig 56 56
No Yes Bos taurus 69_3.1 Cattle 67 67
No Yes Vicugna pacos 69_1 Alpaca 30 30
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 51 51
No Yes Mustela putorius furo 69_1.0 Domestic ferret 60 60
No Yes Ailuropoda melanoleuca 69_1 Giant panda 61 61
No Yes Canis familiaris 69_3.1 Dog 61 61
No Yes Felis catus 69 Domestic cat 39 39
No Yes Equus caballus 69_2 Horse 54 54
No Yes Myotis lucifugus 69_2.0 Little brown bat 117 117
No Yes Pteropus vampyrus 69_1 Large flying fox 57 57
No Yes Sorex araneus 69_1 European shrew 34 34
No Yes Erinaceus europaeus 69 Western European hedgehog 44 44
No Yes Procavia capensis 69_1 Cape rock hyrax 41 41
No Yes Loxodonta africana 69_3 African savanna elephant 56 56
No Yes Echinops telfairi 69 Small Madagascar hedgehog 35 35
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 38 38
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 26 26
No Yes Macropus eugenii 69_1.0 Tammar wallaby 34 34
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 48 48
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 63 63
No Yes Ornithorhynchus anatinus 69_5 Platypus 42 42
No Yes Petromyzon marinus 69_7.0 Sea lamprey 28 28
No Yes Meleagris gallopavo 69_2 Turkey 40 40
No Yes Gallus gallus 69_2 Chicken 49 49
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 48 48
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 52 52
No Yes Anolis carolinensis 69_2.0 Green anole 51 51
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 56 56
No Yes Latimeria chalumnae 69_1 Coelacanth 62 62
No Yes Gadus morhua 69_1 Atlantic cod 58 58
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 58 58
No Yes Takifugu rubripes 69_4 Torafugu 52 52
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 59 59
No Yes Oryzias latipes 69_1 Japanese medaka 55 55
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 72 72
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 68 68
No Yes Danio rerio 69_9 Zebrafish 75 75
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 19 19
No Yes Ciona intestinalis 69 Vase tunicate 30 30
No Yes Drosophila melanogaster 69_5 Fruit fly 26 26
No Yes Caenorhabditis elegans 69_215 Roundworm 102 102
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 11 11
No Yes Arabidopsis thaliana 10 Thale cress 640 640
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Combined (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   5 5
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Endophytic microbiome from Rice (meta-genome)   13 13
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   95305 95035
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   9 9
No Yes Protozoadb 2010_08 (Protozoadb)   160 160
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   10 10
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   8999 8929
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   121867 120116
No Yes Global Ocean Sampling Expedition (GOS)   178 178
No Yes NCBI plasmid sequences (Plasmids)   7 7
No Yes NCBI viral sequences (Viral)   426 426
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   57 57
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   145 145
No Yes TargetDB (Targets)   273 273
No Yes UniProt viral sequences (Viral)   32 32

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.